Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0185500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:5802095:5810965:1 gene:Os04g0185500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Protein containing C-terminal RING-finger. (Os04t0185500-01)
Sequence	ATGCATCAACATAGGATCACTATGCTATCTTCCTCAGAAACATGTCACCTTGGTTCTAGT TCGAACAACCAAGCCATGGATCAGCAGAATTTACTGCCCAGCAACCCCACCGCAGATGAA CAGAATTTACTTCCAAATACTCTAGAGGATGATGATTACCCACATTATTTACTTGGTAGT CATGAGGTGGAAATGCCAAATGGAAGCGTGATTGGTCAGCAAAATACAAGCTTGAACTTA TGGGATTCAGCTGGATCTAGCTCGATGGGCTGTGTAGCTGATCATGATAGTCTTTTTGAG GCCAAAAGGGAACATTTTGCTCCTGCTTTGTCTATCCGAGCTCCCTTAATTATTGGAGGG AGAAGACATGAAGGCAGTAGTTCATTGCCTTCACAGAGCTTAAACTTAGACCTTAATCTT AATCAGGCTGATCAGTTTGATTCTGAGGATGTTGATATGATTCAGAGTAATGGACAACCA GGGATAAACGCTTTTCCTCTCAACAGGGGCCTTTCCATTCCTGAGCATGTTCTGCGCCAT ACAAATTCTTCCAGTGCTACAGGAAATCCTTCACAGGTTGCAAGCTTTTCTGATGGAATG ACAGGCCAAGAAGTTAACCTGTTTGGTGGGCATCGTTCATCTTGCAAGAGAAAGAATATT GATGGGAGTCTTGCAGAGTCTTCTGCCAATGGTAGTTCACGTAATAATCAGCGAAATAAT ATTATACTGGAACCTTCTCCATCCAGTCATGAAAGCACTTCTGGTTTAACTGCACCTGCC CCTACAAACCATGTTTTTTCATACTCTCCTGTGGAACAGCTAAACCAGAATACCAATATG TCTGCAAATGCTATGTTGTCTGATCATTATTCACTATATGGTGATCATGAGCGTGAGAGA TTTCTGAGGAATACCCGGATGAGAACAAGCCCTAATGAGTATGATCAATCATCGTCCAAT CTCTTGCCTGAAGGAAGTCTCAGGTGTTCTGTTTATCAGCCTACTCAGCAACAGTCTTTG TTTATTCCAGTACAACCTAGAGCATCGAGCTCTTCAACAAGTTCTCTTAGTCGGCCTTAT GTGCCTGCTGTCACTCAATTCTCACAAAATTTGCACCGTGCTCCATCAAGTGGCAATTTT GGTTCGAGAATAGGGATTTTTCCTAGTTCTGCTGATACAACAAACCAGTTATCTTCACAA GATCCCAACAGGAGCTCGGTGAGAGGCAATTTTCCTGAGCCCCTTCTGTTAGGTTCTTCT CTGTTTCCTTCTGACTCGGCAGAATTGCTATCTATGCCGGGAGGCAGAAGCAACCAACAA AATTCCAGCTCCACAATTCGAACTGCTGTAAATATAGGAGCTCAACAGATTGCTGGGTTA AATGCATCCCAGCCTACTTCAAGCTCAAGGGGTTCGGTTGATATTGTTAGGAGATCCTTG CAGGCTGCTAGCGTTCCTCAGTCCAGAGGTTCAAGCATTACATCACAGCAGCAACGTGGG CATTCATCCACATCACATGAGATTCGAAGCCATCAACCTGGATCCAGCTCTCGTGCCAAT CAGCAGCATTATGTCAGGGCTGTTCCTCACTCTGTAGATAGGCAAAACTCGAATTACTTG GACCTGCAGTCTTTTATGCAAAGCATTGCTGCTTCAAGAGACGGAATTAGGACAGTCTCA GAGTCTGCCAATCAACTTGTGCATCTTCGCAATGTTGTTGAACAAATTCGTCAGGGAAGA GGTGGAAGGTTTGAGGATCCTAATTTTGAACGTGCACTTTTTGCAAGGCGTGCCAGTTTA ATTGACAGACATCGTGACATGCGGCTTGATGTGGATAATATGTCATATGAGGAATTGTTG GCACTTGGTGAACGCATTGGGTATGTAAACACTGGACTTAGTGAGGATAAAATTAGGACT GGTTTGAAGCAATGGAAATATGTGAGCATACCGATTGAAGAACCTCTAACTGGTGTTGAA CCATGCTGTATTTGCCAGGAAGAATATGCCGAAGGTGAGGACATGGGCAGACTAGACTGT GGGCATGACTTCCACACCGCATGCATCAAACAATGGCTGGTTATAAAAAATCTGTGCCCT ATCTGTAAAAAGACAGGACTGGGCACTTAA

Peptide Sequence

PEP ID	Os04t0185500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:5802095:5810965:1 gene:Os04g0185500 transcript:Os04t0185500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Protein containing C-terminal RING-finger. (Os04t0185500-01)
Sequence	MHQHRITMLSSSETCHLGSSSNNQAMDQQNLLPSNPTADEQNLLPNTLEDDDYPHYLLGS HEVEMPNGSVIGQQNTSLNLWDSAGSSSMGCVADHDSLFEAKREHFAPALSIRAPLIIGG RRHEGSSSLPSQSLNLDLNLNQADQFDSEDVDMIQSNGQPGINAFPLNRGLSIPEHVLRH TNSSSATGNPSQVASFSDGMTGQEVNLFGGHRSSCKRKNIDGSLAESSANGSSRNNQRNN IILEPSPSSHESTSGLTAPAPTNHVFSYSPVEQLNQNTNMSANAMLSDHYSLYGDHERER FLRNTRMRTSPNEYDQSSSNLLPEGSLRCSVYQPTQQQSLFIPVQPRASSSSTSSLSRPY VPAVTQFSQNLHRAPSSGNFGSRIGIFPSSADTTNQLSSQDPNRSSVRGNFPEPLLLGSS LFPSDSAELLSMPGGRSNQQNSSSTIRTAVNIGAQQIAGLNASQPTSSSRGSVDIVRRSL QAASVPQSRGSSITSQQQRGHSSTSHEIRSHQPGSSSRANQQHYVRAVPHSVDRQNSNYL DLQSFMQSIAASRDGIRTVSESANQLVHLRNVVEQIRQGRGGRFEDPNFERALFARRASL IDRHRDMRLDVDNMSYEELLALGERIGYVNTGLSEDKIRTGLKQWKYVSIPIEEPLTGVE PCCICQEEYAEGEDMGRLDCGHDFHTACIKQWLVIKNLCPICKKTGLGT

Transcript Sequence

Transcript ID	Os04t0185500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5802095:5810965:1 gene:Os04g0185500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Protein containing C-terminal RING-finger. (Os04t0185500-01)
Sequence	ATTTCTCCCCACCTCCTCTCCTCCTCCTCCTTCCAGCCGAAGCCACGCGCGGACGGGAGA GAGGGGAAGGACGCGGCCGCGGCTCGCCTCTCCCCCCCCCCCTCGCTTGCCGCCGATCGG CGATCGGGGCGGCGGGACGATCCCCGGAGGGAGCAGCCGGCGCGGAGTCCGGAAGCAGTT TTGTAGCGTTATCCAATTGGCTTCCGCTATCTGCAACAGTTTCCACCATTTGTCAATAAA TTACTGACCTTGTAGTTGAGGGAAGCGGTTCTGTAACATTAGCCGATTGGCGTCCGCTAT CTGCGACGGATTCCACCATTTGTCAATAAATTATTGACCTTGTAGTTGAGGATCGTCAAC CTCAAGTTGTAAAACATTGATTTTTAATGGGTGATGTTTTATTACATTGAACTCATTTAA GTACCTCATAAGTTATCCAAGGAAGACAGTAAAGTTTCGATGCATCAACATAGGATCACT ATGCTATCTTCCTCAGAAACATGTCACCTTGGTTCTAGTTCGAACAACCAAGCCATGGAT CAGCAGAATTTACTGCCCAGCAACCCCACCGCAGATGAACAGAATTTACTTCCAAATACT CTAGAGGATGATGATTACCCACATTATTTACTTGGTAGTCATGAGGTGGAAATGCCAAAT GGAAGCGTGATTGGTCAGCAAAATACAAGCTTGAACTTATGGGATTCAGCTGGATCTAGC TCGATGGGCTGTGTAGCTGATCATGATAGTCTTTTTGAGGCCAAAAGGGAACATTTTGCT CCTGCTTTGTCTATCCGAGCTCCCTTAATTATTGGAGGGAGAAGACATGAAGGCAGTAGT TCATTGCCTTCACAGAGCTTAAACTTAGACCTTAATCTTAATCAGGCTGATCAGTTTGAT TCTGAGGATGTTGATATGATTCAGAGTAATGGACAACCAGGGATAAACGCTTTTCCTCTC AACAGGGGCCTTTCCATTCCTGAGCATGTTCTGCGCCATACAAATTCTTCCAGTGCTACA GGAAATCCTTCACAGGTTGCAAGCTTTTCTGATGGAATGACAGGCCAAGAAGTTAACCTG TTTGGTGGGCATCGTTCATCTTGCAAGAGAAAGAATATTGATGGGAGTCTTGCAGAGTCT TCTGCCAATGGTAGTTCACGTAATAATCAGCGAAATAATATTATACTGGAACCTTCTCCA TCCAGTCATGAAAGCACTTCTGGTTTAACTGCACCTGCCCCTACAAACCATGTTTTTTCA TACTCTCCTGTGGAACAGCTAAACCAGAATACCAATATGTCTGCAAATGCTATGTTGTCT GATCATTATTCACTATATGGTGATCATGAGCGTGAGAGATTTCTGAGGAATACCCGGATG AGAACAAGCCCTAATGAGTATGATCAATCATCGTCCAATCTCTTGCCTGAAGGAAGTCTC AGGTGTTCTGTTTATCAGCCTACTCAGCAACAGTCTTTGTTTATTCCAGTACAACCTAGA GCATCGAGCTCTTCAACAAGTTCTCTTAGTCGGCCTTATGTGCCTGCTGTCACTCAATTC TCACAAAATTTGCACCGTGCTCCATCAAGTGGCAATTTTGGTTCGAGAATAGGGATTTTT CCTAGTTCTGCTGATACAACAAACCAGTTATCTTCACAAGATCCCAACAGGAGCTCGGTG AGAGGCAATTTTCCTGAGCCCCTTCTGTTAGGTTCTTCTCTGTTTCCTTCTGACTCGGCA GAATTGCTATCTATGCCGGGAGGCAGAAGCAACCAACAAAATTCCAGCTCCACAATTCGA ACTGCTGTAAATATAGGAGCTCAACAGATTGCTGGGTTAAATGCATCCCAGCCTACTTCA AGCTCAAGGGGTTCGGTTGATATTGTTAGGAGATCCTTGCAGGCTGCTAGCGTTCCTCAG TCCAGAGGTTCAAGCATTACATCACAGCAGCAACGTGGGCATTCATCCACATCACATGAG ATTCGAAGCCATCAACCTGGATCCAGCTCTCGTGCCAATCAGCAGCATTATGTCAGGGCT GTTCCTCACTCTGTAGATAGGCAAAACTCGAATTACTTGGACCTGCAGTCTTTTATGCAA AGCATTGCTGCTTCAAGAGACGGAATTAGGACAGTCTCAGAGTCTGCCAATCAACTTGTG CATCTTCGCAATGTTGTTGAACAAATTCGTCAGGGAAGAGGTGGAAGGTTTGAGGATCCT AATTTTGAACGTGCACTTTTTGCAAGGCGTGCCAGTTTAATTGACAGACATCGTGACATG CGGCTTGATGTGGATAATATGTCATATGAGGAATTGTTGGCACTTGGTGAACGCATTGGG TATGTAAACACTGGACTTAGTGAGGATAAAATTAGGACTGGTTTGAAGCAATGGAAATAT GTGAGCATACCGATTGAAGAACCTCTAACTGGTGTTGAACCATGCTGTATTTGCCAGGAA GAATATGCCGAAGGTGAGGACATGGGCAGACTAGACTGTGGGCATGACTTCCACACCGCA TGCATCAAACAATGGCTGGTTATAAAAAATCTGTGCCCTATCTGTAAAAAGACAGGACTG GGCACTTAATTTTGCGTGCTTCCGCCTGCGAGGAAAGCGGATAAGCCTCTTTAGACCGAG TGGTTGGTTATAAGGCATGTTACACCTTCCAAGATCCAACATACAGGTGGAATTTATACT ATAGGGTGGTACATGGTACTTTACCAGAAAGGCGATGGTTGTAGACCTGGAGTTTCTTTT TCCCTTTTGTTTAAACCTAGATTTGAAGTTTAAAATTTATTCAATAACATTCAATTGCAA TTGGGCATTTCCT