Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0185100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:5785639:5788514:-1 gene:Os04g0185100 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication factor CDT1-like domain containing protein. (Os04t0185100-01)
Sequence	ATGGAATCCGCGACGCCATCCAAGAGGGCCAAGACGGCGGCCGGTGTCGCCACCCCGCAG AAGATGGGGAAGGCGGCGGCGGCGGCTGCGTTGGCCGACCAGTTCTTGACGCCGGAGAAG CCGACGCCGAAGGTTGCGGCGGCGGCGGCGGCGGCCGAGCAGATCTGGACGCCGGAGAAG CCGAAGCAGCCGTCGGCGGCGGAGCGGAGGGCGCGGAGCAGCGGCGGCGTGGCGTTCTCT GTCAAGGGGGTCCGGCGGGCGGCGCTCGAGCTGCGGCGGCGGTCGGAGAGGGGGGCGGCG TCGCCGGCGGCGGCGGCGGCGGCGGCGGAGGACGAGCTCGAGGCCGTGGAGCGGCAGCTT GGTGTTGGTCCCGCGCCCGTCCGGAGCCCCGTCAAGCGCACGGCCAAGCTGCCGGAGAGC TACGAGATGCTGTGCGAGTTCTTCAATTGCTTCGAGAGTTCCACCCGGTTGCTCCGTATG AAGGGATCCAAGGCATCCTTCCCCAACATTTGTGCTAGCATCCAGCATTTGTCTGAACGG AGGTTTACCTACAGCCATCTTGCTCAGCTTAAGTACATAATGCCTGAGGTTATTGTTATC AATAAGATCCTTTTGCGTGACGAGACGACTTGCTGCATGAAGCCTGATCTTCAGGTGAAC CTCCTGGTTGATGCGGTTGAGGGTGTTGCCAAGCAAAAGGGGGAAACCGGATACTCGGCC TTGAGAAGGATCTTCAGGCAGAGGCTTGTGGATTACTTCAGAGACCATCCTGAGGGACAT GACATTCCAGAGCATGAACTGCCACATCCATTTGGTCCAACAAGATCAAGTGCACCCCAG GCCATTCAAGAAGATATTCCCAAAACTGTTTCTGCGCTACCGTTGTCATCTGCAACTGAT CGGCAGCCTGTTGCAATGTCTCACATGCCTAATTCCTTCAAGAGAATGTTTTCACAGCGA TCTGCGGCTGCTGCTGCTGCAACTACAAGCACAACCAGTCCGCTTTCAAAGGTTGAGCCC TCTATTACCTCGCCATTGAGCAGGAAGTCGCTGCTCGGTTCTCCTGTTTCTGGTAGTGTG AGCTTAGTCCGTGAATCCGAAGGCCAAGAGAAAAGTGTCGAGGGTGTTGCATTCCAGTCT GGTGTTTCAGAAGGAACTCCTGCAAAGTTTGCCTCTACGCCCGTGAGGTTAATGGCAGAG ACACCAGTCCTTCAAACCCCCAAAAGGCCTGTGTCTGGTACAGGCTATGATACTCCACCT CTCAAGATGGCGAAGCGATCTGCTAGGACGAAGCTCTTCATGACACCGACGAAAGATGCT AGCAGCATGGATGAGAAAAAGCAAAGCACAAGTGCGTCGACCCTTGATGGTGATGATGAG TTGCTCAGTTTTCTCCCAAAGTCTCTCCTGCAATCGGTGAAGGACAAGGAAAACAGAGCT TTGGTGGAGAAGCAAACCGGATTTGCAGATCACATTAAAAGGGAGAAACTAATAGCATCA CTGCCAAGCATCTTTGACATTATCTTCCTTATCTATCAATCAAGGCAGCGCACTGTGATG ACAAAGCAGGAGCTCATCCACAAGATAATTGCAAGCAATCCAAAAATTGTGGACAGAGGT GAAGTTGAAGATCAGTTAAAATTGTTGGAAGAGATAATTCCAGACTGGATCTCTGAGAAA ACCGCACGAACTGGTGATGTTCTCTGTTGTGTGGATACAGCAATGAGCCAAGCAGAGATT CGACAGAGGCTGTATGCTGCTGAATAG

Peptide Sequence

PEP ID	Os04t0185100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:5785639:5788514:-1 gene:Os04g0185100 transcript:Os04t0185100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication factor CDT1-like domain containing protein. (Os04t0185100-01)
Sequence	MESATPSKRAKTAAGVATPQKMGKAAAAAALADQFLTPEKPTPKVAAAAAAAEQIWTPEK PKQPSAAERRARSSGGVAFSVKGVRRAALELRRRSERGAASPAAAAAAAEDELEAVERQL GVGPAPVRSPVKRTAKLPESYEMLCEFFNCFESSTRLLRMKGSKASFPNICASIQHLSER RFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQVNLLVDAVEGVAKQKGETGYSA LRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTVSALPLSSATD RQPVAMSHMPNSFKRMFSQRSAAAAAATTSTTSPLSKVEPSITSPLSRKSLLGSPVSGSV SLVRESEGQEKSVEGVAFQSGVSEGTPAKFASTPVRLMAETPVLQTPKRPVSGTGYDTPP LKMAKRSARTKLFMTPTKDASSMDEKKQSTSASTLDGDDELLSFLPKSLLQSVKDKENRA LVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRG EVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAAE

Transcript Sequence

Transcript ID	Os04t0185100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5785639:5788514:-1 gene:Os04g0185100 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication factor CDT1-like domain containing protein. (Os04t0185100-01)
Sequence	ACTTAAATACCCCACGAAACCCTAGCAACCGCCGCCTCCTCCACCTCCACCAAATCCAAT CCACCTCCGAAATGGAATCCGCGACGCCATCCAAGAGGGCCAAGACGGCGGCCGGTGTCG CCACCCCGCAGAAGATGGGGAAGGCGGCGGCGGCGGCTGCGTTGGCCGACCAGTTCTTGA CGCCGGAGAAGCCGACGCCGAAGGTTGCGGCGGCGGCGGCGGCGGCCGAGCAGATCTGGA CGCCGGAGAAGCCGAAGCAGCCGTCGGCGGCGGAGCGGAGGGCGCGGAGCAGCGGCGGCG TGGCGTTCTCTGTCAAGGGGGTCCGGCGGGCGGCGCTCGAGCTGCGGCGGCGGTCGGAGA GGGGGGCGGCGTCGCCGGCGGCGGCGGCGGCGGCGGCGGAGGACGAGCTCGAGGCCGTGG AGCGGCAGCTTGGTGTTGGTCCCGCGCCCGTCCGGAGCCCCGTCAAGCGCACGGCCAAGC TGCCGGAGAGCTACGAGATGCTGTGCGAGTTCTTCAATTGCTTCGAGAGTTCCACCCGGT TGCTCCGTATGAAGGGATCCAAGGCATCCTTCCCCAACATTTGTGCTAGCATCCAGCATT TGTCTGAACGGAGGTTTACCTACAGCCATCTTGCTCAGCTTAAGTACATAATGCCTGAGG TTATTGTTATCAATAAGATCCTTTTGCGTGACGAGACGACTTGCTGCATGAAGCCTGATC TTCAGGTGAACCTCCTGGTTGATGCGGTTGAGGGTGTTGCCAAGCAAAAGGGGGAAACCG GATACTCGGCCTTGAGAAGGATCTTCAGGCAGAGGCTTGTGGATTACTTCAGAGACCATC CTGAGGGACATGACATTCCAGAGCATGAACTGCCACATCCATTTGGTCCAACAAGATCAA GTGCACCCCAGGCCATTCAAGAAGATATTCCCAAAACTGTTTCTGCGCTACCGTTGTCAT CTGCAACTGATCGGCAGCCTGTTGCAATGTCTCACATGCCTAATTCCTTCAAGAGAATGT TTTCACAGCGATCTGCGGCTGCTGCTGCTGCAACTACAAGCACAACCAGTCCGCTTTCAA AGGTTGAGCCCTCTATTACCTCGCCATTGAGCAGGAAGTCGCTGCTCGGTTCTCCTGTTT CTGGTAGTGTGAGCTTAGTCCGTGAATCCGAAGGCCAAGAGAAAAGTGTCGAGGGTGTTG CATTCCAGTCTGGTGTTTCAGAAGGAACTCCTGCAAAGTTTGCCTCTACGCCCGTGAGGT TAATGGCAGAGACACCAGTCCTTCAAACCCCCAAAAGGCCTGTGTCTGGTACAGGCTATG ATACTCCACCTCTCAAGATGGCGAAGCGATCTGCTAGGACGAAGCTCTTCATGACACCGA CGAAAGATGCTAGCAGCATGGATGAGAAAAAGCAAAGCACAAGTGCGTCGACCCTTGATG GTGATGATGAGTTGCTCAGTTTTCTCCCAAAGTCTCTCCTGCAATCGGTGAAGGACAAGG AAAACAGAGCTTTGGTGGAGAAGCAAACCGGATTTGCAGATCACATTAAAAGGGAGAAAC TAATAGCATCACTGCCAAGCATCTTTGACATTATCTTCCTTATCTATCAATCAAGGCAGC GCACTGTGATGACAAAGCAGGAGCTCATCCACAAGATAATTGCAAGCAATCCAAAAATTG TGGACAGAGGTGAAGTTGAAGATCAGTTAAAATTGTTGGAAGAGATAATTCCAGACTGGA TCTCTGAGAAAACCGCACGAACTGGTGATGTTCTCTGTTGTGTGGATACAGCAATGAGCC AAGCAGAGATTCGACAGAGGCTGTATGCTGCTGAATAGGGAGGAACTGCAGTATGGATAC ATTTTGGTTAGTACTGCAGGGATGCCTATCGATAGCAACTTTACAACCACAGAGGCTTGA AGAAATCAAGATTAAACAAATCGGAATTAATTTAGTTTAATCAACATATTGCAGTCTTCA CATCCCGTTCAAGCTCAAATGAATGACTTGTATAGATAACCCAGCCTTGCTAACTGATTG CTGTTGTTTTTTTGTTCCATCGTGTGTAAACTCTATTTGTAAAGCCTTGAATGGCATCAA TCCAGAAGAAAGGATGTGTCTATTG