Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0182900-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:5645679:5649613:1 gene:Os04g0182900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140C02.3 protein. (Os04t0182900-00)
Sequence

ATGGCGGCGGTGACGGTGGGGACGGAGACGACGGCGTCGATCCTGTGCCCAGCGGCGGCG
AACTCGGTGGTGGGGATTAAGCCGACGGTTGGGTTGACAAGCCGGTCAGGTGTTATCCCG
TTCACAACTAGGCAGGACACCGTCGGACCGTTATGTCGAACAGTGGCAGATGCTGTCCAT
GTGTTGGATGCTATTGTGGGTTATGATGCTCTTGATGCCAAAGCCACAAAAGCAGCATCG
AAGTATATCCCTGCTGGTGGATATGTGCAATTCTTGAGAATTGATGGGTTGAAGGGTAAG
AGGATTGGCATACCAGACGGTTTTTTTGATTTCCCAAATGGAACTGTCAGGAAGATGGTG
TACAAGCAACACCTCAACACAATGAGGCAACAGGGTGCAGTTGTAATCGAAAACCTCGAG
ATAGCTAATTTGAGTGTCATATTCGATGGCACTAAAAGTGGATTGCTCACCGCATTGCTG
GCCGAGTTCAAGCTAAACCTGAACAACTATCTGTCAGACTTATCATACTCGCCAGTTCGT
TCTCTCGCTGAAATAATTGCATTCAACAATGCACATCCTGTCGAAGAGGAGCTGAAAGAG
CATGGACAGAGCATCTTGCTGATGTCTGAAAACACAGCCGGGATCGGCCCTGCAGAGAAG
GCTGCGATCCGTCGTCTCAACGAGCTGTCAGTGAATGGGGTCGAGAAGCTCATGAACGAT
CATCAGCTGGACGCCATCGTGACGCCGGACTCCGCCGCCGCCGTCGTCCTCGCCTTCCAT
GGCCTCCCCGGCGTGGTTGTGCCGGCAGGGTACGACGAGAAAGGAGTCCCCTTTGGTGTC
TGCTTCGGTGGATTGAAGGGGTACGAGCCGAGGCTAATTGAGATGGCTTATGCCTTCGAG
CAGGTTACCAAAGTGAGAATGCCTCCAATGTTCAAGCCATAG

Peptide Sequence

PEP ID

Os04t0182900-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:5645679:5649613:1 gene:Os04g0182900 transcript:Os04t0182900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140C02.3 protein. (Os04t0182900-00)
Sequence

MAAVTVGTETTASILCPAAANSVVGIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADAVH
VLDAIVGYDALDAKATKAASKYIPAGGYVQFLRIDGLKGKRIGIPDGFFDFPNGTVRKMV
YKQHLNTMRQQGAVVIENLEIANLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYSPVR
SLAEIIAFNNAHPVEEELKEHGQSILLMSENTAGIGPAEKAAIRRLNELSVNGVEKLMND
HQLDAIVTPDSAAAVVLAFHGLPGVVVPAGYDEKGVPFGVCFGGLKGYEPRLIEMAYAFE
QVTKVRMPPMFKP

Transcript Sequence

Transcript ID

Os04t0182900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:5645679:5649613:1 gene:Os04g0182900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140C02.3 protein. (Os04t0182900-00)
Sequence

ATGGCGGCGGTGACGGTGGGGACGGAGACGACGGCGTCGATCCTGTGCCCAGCGGCGGCG
AACTCGGTGGTGGGGATTAAGCCGACGGTTGGGTTGACAAGCCGGTCAGGTGTTATCCCG
TTCACAACTAGGCAGGACACCGTCGGACCGTTATGTCGAACAGTGGCAGATGCTGTCCAT
GTGTTGGATGCTATTGTGGGTTATGATGCTCTTGATGCCAAAGCCACAAAAGCAGCATCG
AAGTATATCCCTGCTGGTGGATATGTGCAATTCTTGAGAATTGATGGGTTGAAGGGTAAG
AGGATTGGCATACCAGACGGTTTTTTTGATTTCCCAAATGGAACTGTCAGGAAGATGGTG
TACAAGCAACACCTCAACACAATGAGGCAACAGGGTGCAGTTGTAATCGAAAACCTCGAG
ATAGCTAATTTGAGTGTCATATTCGATGGCACTAAAAGTGGATTGCTCACCGCATTGCTG
GCCGAGTTCAAGCTAAACCTGAACAACTATCTGTCAGACTTATCATACTCGCCAGTTCGT
TCTCTCGCTGAAATAATTGCATTCAACAATGCACATCCTGTCGAAGAGGAGCTGAAAGAG
CATGGACAGAGCATCTTGCTGATGTCTGAAAACACAGCCGGGATCGGCCCTGCAGAGAAG
GCTGCGATCCGTCGTCTCAACGAGCTGTCAGTGAATGGGGTCGAGAAGCTCATGAACGAT
CATCAGCTGGACGCCATCGTGACGCCGGACTCCGCCGCCGCCGTCGTCCTCGCCTTCCAT
GGCCTCCCCGGCGTGGTTGTGCCGGCAGGGTACGACGAGAAAGGAGTCCCCTTTGGTGTC
TGCTTCGGTGGATTGAAGGGGTACGAGCCGAGGCTAATTGAGATGGCTTATGCCTTCGAG
CAGGTTACCAAAGTGAGAATGCCTCCAATGTTCAAGCCATAG