Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0178400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:5332365:5334476:-1 gene:Os04g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 99A3 description:Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment). (Os04t0178400-01)
Sequence	ATGATGGAGATAAACTCAGAAGCCACCGTCACCCTCGTCTCCGTCGTCACCCTGCCCATT CTTCTCGCGTTGCTGACCCGCAAGTCGTCGTCAAAGAAGAGACGGCCTCCGGGGCCATGG AACCTCCCCTTGGTCGGCGGCCTCCTCCACCTCCTCCGGTCGCAACCGCAGGTCGCACTC CGCGACCTCGCCGGCAAGTACGGCCCGGTGATGTTCCTGCGGACGGGGCAGGTGGACACC GTCGTGATCTCCTCGCCGGCGGCGGCGCAGGAGGTGCTCCGCGACAAGGACGTCACCTTC GCGTCGCGGCCGAGCCTCCTCGTCTCGGAGATCTTCTGCTACGGCAACCTCGACATCGGC TTCGCGCCCTACGGCGCCTACTGGCGGATGCTGCGCAAGCTCTGCACGGTGGAGCTCCTC AGCACCAAGATGGTGCGGCAGCTCGCGCCGATCAGGGACGGCGAGACGCTGGCCCTTGTC AGGAACATCGAGGCCGCCGCCGGCGGCAAGAAGCCGTTCACCCTCGCCACGCTGCTCATC TCGTGCACGAACACGTTCACCGCGAAGGCGGCGTTCGGGCAGGCGTGCGGCGGCGAGCTC CAGGAGCAGTTCTTGACGGCTCTGGACGAAGCGCTCAAGTTCAGCAATGGGTTCTGCTTC GGCGACCTCTTCCCGTCGCTGCGGTTCATCGACGCCATGACCGGGCTGAGGAGCCGCCTG GAGCGACTGCGCTTGCAGCTGGACACCGTCTTCGACAAGATCGTCGCTCAGTGCGAGTCG AATCCGGGTGATTCCCTTGTCAACGTCCTGCTCAGGATCAAGGACCAGGGCGAGCTTGAC TTCCCCTTTAGCTCAACACACGTCAAGGCAATTATACTGGATATGTTCACGGGAGGGACA GAGACGACATCATCTACCACCGAGTGGCTCATGTCGGAGTTGATGAGGAACCCAGAGGTG ATGGCCAAGGTGCAGGCTGAGGTGCGAGGAGTATTCGACAACAAGAGCCCACAAGACCAC GAGGGCCTGCTTGAAAACCTATCATACATGAAGTTGGTGATCAAGGAGACCCTGAGGCTG AATCCGGTGTTGCCGCTGCTACTCCCCCATTTATGTCGGGAGACCTGCGAAATCGGAGGG TATGAGATTGTGGAGGGCACCAGAGTGTTGATCAATTCGTGGGCGATGGCGAGGAGCCCC GAGTATTGGGACGATGCGGAGAAGTTCATACCAGAGAGGTTTGAGGATGGCACAGCGGAC TTCAAAGGCTCCCGTTTTGAGTACTTGCCATTTGGGACCGGGAGAAGGAGGTGCCCTGGT GATATATTTGCAATGGCCACGCTGGAACTCATCGTGGCGCGCCTTCTATACTACTTCGAC TGGAGCCTCCCGGATGGGATGCAGCCAGGTGATATCGACATGGAGCTCGTCGTTGGTGCA ACGGCGAGGAGAAAGAATCATCTCCAGCTAGTGGCATCACCATATAAGCCGATTTCCATG CAAAGTTGA

Peptide Sequence

PEP ID	Os04t0178400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:5332365:5334476:-1 gene:Os04g0178400 transcript:Os04t0178400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 99A3 description:Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment). (Os04t0178400-01)
Sequence	MMEINSEATVTLVSVVTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVAL RDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIG FAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLI SCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRL ERLRLQLDTVFDKIVAQCESNPGDSLVNVLLRIKDQGELDFPFSSTHVKAIILDMFTGGT ETTSSTTEWLMSELMRNPEVMAKVQAEVRGVFDNKSPQDHEGLLENLSYMKLVIKETLRL NPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTAD FKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGA TARRKNHLQLVASPYKPISMQS

Transcript Sequence

Transcript ID	Os04t0178400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5332365:5334476:-1 gene:Os04g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 99A3 description:Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment). (Os04t0178400-01)
Sequence	AAGCTAAACTGCCAAGTAATTAAACCTAATCAATCATCAAGCCATATATACATCCTCTAT CTATCGATCGATGATGGAGATAAACTCAGAAGCCACCGTCACCCTCGTCTCCGTCGTCAC CCTGCCCATTCTTCTCGCGTTGCTGACCCGCAAGTCGTCGTCAAAGAAGAGACGGCCTCC GGGGCCATGGAACCTCCCCTTGGTCGGCGGCCTCCTCCACCTCCTCCGGTCGCAACCGCA GGTCGCACTCCGCGACCTCGCCGGCAAGTACGGCCCGGTGATGTTCCTGCGGACGGGGCA GGTGGACACCGTCGTGATCTCCTCGCCGGCGGCGGCGCAGGAGGTGCTCCGCGACAAGGA CGTCACCTTCGCGTCGCGGCCGAGCCTCCTCGTCTCGGAGATCTTCTGCTACGGCAACCT CGACATCGGCTTCGCGCCCTACGGCGCCTACTGGCGGATGCTGCGCAAGCTCTGCACGGT GGAGCTCCTCAGCACCAAGATGGTGCGGCAGCTCGCGCCGATCAGGGACGGCGAGACGCT GGCCCTTGTCAGGAACATCGAGGCCGCCGCCGGCGGCAAGAAGCCGTTCACCCTCGCCAC GCTGCTCATCTCGTGCACGAACACGTTCACCGCGAAGGCGGCGTTCGGGCAGGCGTGCGG CGGCGAGCTCCAGGAGCAGTTCTTGACGGCTCTGGACGAAGCGCTCAAGTTCAGCAATGG GTTCTGCTTCGGCGACCTCTTCCCGTCGCTGCGGTTCATCGACGCCATGACCGGGCTGAG GAGCCGCCTGGAGCGACTGCGCTTGCAGCTGGACACCGTCTTCGACAAGATCGTCGCTCA GTGCGAGTCGAATCCGGGTGATTCCCTTGTCAACGTCCTGCTCAGGATCAAGGACCAGGG CGAGCTTGACTTCCCCTTTAGCTCAACACACGTCAAGGCAATTATACTGGATATGTTCAC GGGAGGGACAGAGACGACATCATCTACCACCGAGTGGCTCATGTCGGAGTTGATGAGGAA CCCAGAGGTGATGGCCAAGGTGCAGGCTGAGGTGCGAGGAGTATTCGACAACAAGAGCCC ACAAGACCACGAGGGCCTGCTTGAAAACCTATCATACATGAAGTTGGTGATCAAGGAGAC CCTGAGGCTGAATCCGGTGTTGCCGCTGCTACTCCCCCATTTATGTCGGGAGACCTGCGA AATCGGAGGGTATGAGATTGTGGAGGGCACCAGAGTGTTGATCAATTCGTGGGCGATGGC GAGGAGCCCCGAGTATTGGGACGATGCGGAGAAGTTCATACCAGAGAGGTTTGAGGATGG CACAGCGGACTTCAAAGGCTCCCGTTTTGAGTACTTGCCATTTGGGACCGGGAGAAGGAG GTGCCCTGGTGATATATTTGCAATGGCCACGCTGGAACTCATCGTGGCGCGCCTTCTATA CTACTTCGACTGGAGCCTCCCGGATGGGATGCAGCCAGGTGATATCGACATGGAGCTCGT CGTTGGTGCAACGGCGAGGAGAAAGAATCATCTCCAGCTAGTGGCATCACCATATAAGCC GATTTCCATGCAAAGTTGATGGATGTGTGTGACTGTGTGTCGGTGTACTTGCGGTTCGCT TACGTGCTTGCATACCTCTTAATAAGTTTTGTTTGTCCTGGGGAAATGGACAAACAAATT AATAATACTAGTTGATACCCCGTGCTTTGCCGTGGGATGTGTGGATGAATGCATTTTATA TATGATATAAATGATAGATGTACAAGTTTAAATAATGTG