Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0177600-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:5291177:5306497:-1 gene:Os04g0177600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Actin-related protein 9. (Os04t0177600-01);Actin/actin-like family protein. (Os04t0177600-02)
Sequence	ATGGATTACCTCAAGACGGTGGTTCCATCACAGCTGATGGCCGAGCGCGGCGCCAACCTC GTCGTCATCAACCCAGGATCTTCAAATGTGCGCATTGGGTTCGCAAGTCAGGATGTTCCA TTCAATATACCGCACTGCATTGCTCGACATATCACTCAGCAGAAGGATGATACACCAAGG CTTTCTGTGCGAGACAAGATGCTCAACTGCCATGCAACTCCATCGCAGAATGCAGAGCGG GAGAGGGCATATGATATTATTGCATCGCTGCTCAAAATACCCTTTTTGGATGAAGACATG CCTTCAGCGAACCAGGCGTTACCTCCTAAGATGGGACGTGTTGATGCCCTTTCTTCACAG CAAAACAAAGATGATAGTAAATTCACATGGACAGATGTAATGGACAGAAGTATTAAATCA TCTACACCAATTGTTGACAAGGATGCTGACGTGGATCCCCTGCAAAGATCAACTCCTGAC GATACTGAGCCTAATTCTGAAGAAAACATGTATAAAGAAATAATATTTGGAGAGGATGCT TTGAAAATCCCACCTTCTGAGTCATACTGTCTGAGTCACCCGATCAGGAGAGGCCATTTC AATATTTCTCAGGATTATTCATTACATCAGGTTTTAGAAGATTTGCGCACTATTTGGAAC TGGATATTGACAGAAAAATTGCATATAAATCCAAGAGATCGGCATCTGTATTCTGCAATT CTTGTTCTAGGAGAGACATTTGATAACCGAGAAATCAAGGAAATGTTGTCAATCGTACTT TGCGATTTGGGTTTTAGCACAGCAGTGATACATCAGGAAGCTCTAGCTGCAGCATTTGGA AATGGCTTGTCGACATCTTGTGTGGTCAACATTGGCGCGCAAGTTACACAAGTAGTTTGT GTTGAGGATGGTGTTGCTTTACCCCACACAGCCCTGGCGCTTCCATACGGTGGAGATGAC ATATCTAGATGCCTTCTTTGGGTTCAACGTCGTCATTGCACATGGCCAAACTTCCAAACT GATCCAGTGAACAAGCCTATAGATATGCTAATGCTCAACAAACTAAAAGAGTCATACAGC CAGATAAGAAGTGGAAGTTTTGATGCTGTCAGTGTTGTTCATTCATATGAGCATGAAAAA TCAGTTGGTCATCAGAAAACAAAGCTATCGGCTCTGAATGTACCTCCTATGGGGCTACTT TATCCAAGGGTTCTTGTCCCAGAAGAATACCCTCCACCTCCTCGATCTTGGTTCCAAGAT TATGATGACATGTTAGAAGATACATGGCAAACAAGTGACAGTCTTTACTCAAGTGGGAAT GGTGGGTTCGGTATGTGGGACAATTATCCGATGTTTCCCACCAGATTAAAAAAGTTTGAT AACATCGGTCTTGTAGAAGCCATTGTTAGTAGTATCCTTTCGACAGGACGTATTGAGCTT CAAAGGAAGCTATTCTGCAGCATTCAGCTGGTTGGTGGTACAGCTTCAACAGCAGGCCTT GCACCAGTTCTAGAACAAAGGGTTCTCAATACTATTCCATCAAATCAACCGATAGAGAAA GCAGAGGTATTACAGTCGAGGAGTTATCCATTATTTGTCCCATGGAAAGGTGGTGTGATT TTGGGCGTACTTGATATTGGTCGTGATGCTTGGATACATAGAGAAGATTGGGCTAAAAAT GGTGTCCACATAGGGAGTGGGAGAAAATATAGGGATTCTTATTTTCTTCAGGCACAGGCA ATGTGTTACTACAATTCATAA

Peptide Sequence

PEP ID	Os04t0177600-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:5291177:5306497:-1 gene:Os04g0177600 transcript:Os04t0177600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Actin-related protein 9. (Os04t0177600-01);Actin/actin-like family protein. (Os04t0177600-02)
Sequence	MDYLKTVVPSQLMAERGANLVVINPGSSNVRIGFASQDVPFNIPHCIARHITQQKDDTPR LSVRDKMLNCHATPSQNAERERAYDIIASLLKIPFLDEDMPSANQALPPKMGRVDALSSQ QNKDDSKFTWTDVMDRSIKSSTPIVDKDADVDPLQRSTPDDTEPNSEENMYKEIIFGEDA LKIPPSESYCLSHPIRRGHFNISQDYSLHQVLEDLRTIWNWILTEKLHINPRDRHLYSAI LVLGETFDNREIKEMLSIVLCDLGFSTAVIHQEALAAAFGNGLSTSCVVNIGAQVTQVVC VEDGVALPHTALALPYGGDDISRCLLWVQRRHCTWPNFQTDPVNKPIDMLMLNKLKESYS QIRSGSFDAVSVVHSYEHEKSVGHQKTKLSALNVPPMGLLYPRVLVPEEYPPPPRSWFQD YDDMLEDTWQTSDSLYSSGNGGFGMWDNYPMFPTRLKKFDNIGLVEAIVSSILSTGRIEL QRKLFCSIQLVGGTASTAGLAPVLEQRVLNTIPSNQPIEKAEVLQSRSYPLFVPWKGGVI LGVLDIGRDAWIHREDWAKNGVHIGSGRKYRDSYFLQAQAMCYYNS

Transcript Sequence

Transcript ID	Os04t0177600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5291177:5306497:-1 gene:Os04g0177600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Actin-related protein 9. (Os04t0177600-01);Actin/actin-like family protein. (Os04t0177600-02)
Sequence	ACGAGCGCGTCCCCGACGAGGCCGTCGCCTCCGACTCCGGCGCTCCCTTCCCTTCCCTTC CGACGCGCGCGACGCCTTCTCCGGGGAGAAAATATGGATTACCTCAAGACGGTGGTTCCA TCACAGCTGATGGCCGAGCGCGGCGCCAACCTCGTCGTCATCAACCCAGGATCTTCAAAT GTGCGCATTGGGTTCGCAAGTCAGGATGTTCCATTCAATATACCGCACTGCATTGCTCGA CATATCACTCAGCAGAAGGATGATACACCAAGGCTTTCTGTGCGAGACAAGATGCTCAAC TGCCATGCAACTCCATCGCAGAATGCAGAGCGGGAGAGGGCATATGATATTATTGCATCG CTGCTCAAAATACCCTTTTTGGATGAAGACATGCCTTCAGCGAACCAGGCGTTACCTCCT AAGATGGGACGTGTTGATGCCCTTTCTTCACAGCAAAACAAAGATGATAGTAAATTCACA TGGACAGATGTAATGGACAGAAGTATTAAATCATCTACACCAATTGTTGACAAGGATGCT GACGTGGATCCCCTGCAAAGATCAACTCCTGACGATACTGAGCCTAATTCTGAAGAAAAC ATGTATAAAGAAATAATATTTGGAGAGGATGCTTTGAAAATCCCACCTTCTGAGTCATAC TGTCTGAGTCACCCGATCAGGAGAGGCCATTTCAATATTTCTCAGGATTATTCATTACAT CAGGTTTTAGAAGATTTGCGCACTATTTGGAACTGGATATTGACAGAAAAATTGCATATA AATCCAAGAGATCGGCATCTGTATTCTGCAATTCTTGTTCTAGGAGAGACATTTGATAAC CGAGAAATCAAGGAAATGTTGTCAATCGTACTTTGCGATTTGGGTTTTAGCACAGCAGTG ATACATCAGGAAGCTCTAGCTGCAGCATTTGGAAATGGCTTGTCGACATCTTGTGTGGTC AACATTGGCGCGCAAGTTACACAAGTAGTTTGTGTTGAGGATGGTGTTGCTTTACCCCAC ACAGCCCTGGCGCTTCCATACGGTGGAGATGACATATCTAGATGCCTTCTTTGGGTTCAA CGTCGTCATTGCACATGGCCAAACTTCCAAACTGATCCAGTGAACAAGCCTATAGATATG CTAATGCTCAACAAACTAAAAGAGTCATACAGCCAGATAAGAAGTGGAAGTTTTGATGCT GTCAGTGTTGTTCATTCATATGAGCATGAAAAATCAGTTGGTCATCAGAAAACAAAGCTA TCGGCTCTGAATGTACCTCCTATGGGGCTACTTTATCCAAGGGTTCTTGTCCCAGAAGAA TACCCTCCACCTCCTCGATCTTGGTTCCAAGATTATGATGACATGTTAGAAGATACATGG CAAACAAGTGACAGTCTTTACTCAAGTGGGAATGGTGGGTTCGGTATGTGGGACAATTAT CCGATGTTTCCCACCAGATTAAAAAAGTTTGATAACATCGGTCTTGTAGAAGCCATTGTT AGTAGTATCCTTTCGACAGGACGTATTGAGCTTCAAAGGAAGCTATTCTGCAGCATTCAG CTGGTTGGTGGTACAGCTTCAACAGCAGGCCTTGCACCAGTTCTAGAACAAAGGGTTCTC AATACTATTCCATCAAATCAACCGATAGAGAAAGCAGAGGTATTACAGTCGAGGAGTTAT CCATTATTTGTCCCATGGAAAGGTGGTGTGATTTTGGGCGTACTTGATATTGGTCGTGAT GCTTGGATACATAGAGAAGATTGGGCTAAAAATGGTGTCCACATAGGGAGTGGGAGAAAA TATAGGGATTCTTATTTTCTTCAGGCACAGGCAATGTGTTACTACAATTCATAACAGGTA ATTTTTATGAAGACTGTCATGGGATGTAGGGTGAATTGAGTGCACTTCATGGTGGAAACC TTTGGATATAGCAGAAGGTTCATCAAGAAGGGACCCGGATGTACTAACCCTTCAGTTAGA AGTAGCATTGCATGTAGAACATCTATTTTCACAGTAATCTACTAACCCTGTAACTCGTAT TGTCGCATCAGGATACACCTCCATGAGATCGTGTAGACATGCTTTGTGAGGTCAGGAAAT TGTATGCTGTGCATGAGTTGCATCCGTTATTCTTGAC