Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0175900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:5178491:5186485:1 gene:Os04g0175900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAFFEIC ACID 3-O-METHYLTRANSFERASE LIKE 6 description:Winged helix repressor DNA-binding domain containing protein. (Os04t0175900-01)
Sequence	ATGGCTTCGGGCATTAGCAGGACTCCGGCCACGGGTGTCACCGCCGGCGGCGGCGACGAC GAGGAGGCGGCATGGTTGCACGCGCTTGAGCTGATCTCGGGCTTCACCGTCTCCATGACA CTGAAGGCGGCGATCCAGCTCGGACTCATCGACGCACTTACCGCCGCCGCCGACGGCCGC GCGCTGACCGCCGGCGAGCTGGTTGCGCAGCTCCCGGCGGTGGACGATGCCGAGGCGGCG ACCTCGGTGGACCGGATGCTGCGGCTCCTGGCGTCGTTCAACGTCGTCAGGTGCTCGACG GAGGCGGGGCCTGGCGGTGATCCTCTCCGGCGCTACTCGCCGGCGCCTGTGTGCAGGTGG TTCACCGCCGGCGACAACCACCAAGGGTCTCTGGCACCCAGGCTCATGCTCGACGTCGAC GAAGACAATCTGAGCACCTGGCATCAGATGGCGGCGGCGGTCGTCAGCGGTGGGCCATCG GCGTTCGAGAGGGCGCACGGGATGCCATTGTTTGAGTACATGGGGACGAACCACCGGTTC AATATGCTGTTCAACCAGGCCATGTCGCAGCAGTCCATGATGGTGATGAACAAGCTGCTA GACCGCTTCCATGGGTTTGATGGCATCAGTGTCCTCGTCGACGTCGGCGGGGGCACCGGC GTCACCCTGAAGATGATCATCTCCCGGTATAAGCACATTACTGGTGTCAACTTCGACTTA CCCCACGTCATATCTCAGGCTCCATCTCTTCCGGGTGTGAATCATGTAGCTGGAAATATG TTTGAGAGCGTACCTAAAGGAGATGCAATTTTCTTGAAGTCGATGCTCCTACGAAACGAT GAGGAGTGCATCAAGATTCTCAAGAACTGCCACTATGCTCTCTCAGACAATGGGAAGGTG ATTGTTGTTGATATTGTTCTCCCTGAAACCCCAAAACCGGTACCCGAAGCACAAAACCCA CTCCGGATGGACGTTATGATGCTCAACAATCTTCGTGGAGGAAAGATAAGGACAGAGCAG GAGTACGCGAAGCTAGCTATGGATTCTGGCTTCAGTGGTTCCTTCCGGACAACCTACATT TTCGCCAACTTTATGGCAATTGAACTATGCAAGTAG

Peptide Sequence

PEP ID	Os04t0175900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:5178491:5186485:1 gene:Os04g0175900 transcript:Os04t0175900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAFFEIC ACID 3-O-METHYLTRANSFERASE LIKE 6 description:Winged helix repressor DNA-binding domain containing protein. (Os04t0175900-01)
Sequence	MASGISRTPATGVTAGGGDDEEAAWLHALELISGFTVSMTLKAAIQLGLIDALTAAADGR ALTAGELVAQLPAVDDAEAATSVDRMLRLLASFNVVRCSTEAGPGGDPLRRYSPAPVCRW FTAGDNHQGSLAPRLMLDVDEDNLSTWHQMAAAVVSGGPSAFERAHGMPLFEYMGTNHRF NMLFNQAMSQQSMMVMNKLLDRFHGFDGISVLVDVGGGTGVTLKMIISRYKHITGVNFDL PHVISQAPSLPGVNHVAGNMFESVPKGDAIFLKSMLLRNDEECIKILKNCHYALSDNGKV IVVDIVLPETPKPVPEAQNPLRMDVMMLNNLRGGKIRTEQEYAKLAMDSGFSGSFRTTYI FANFMAIELCK

Transcript Sequence

Transcript ID	Os04t0175900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5178491:5186485:1 gene:Os04g0175900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAFFEIC ACID 3-O-METHYLTRANSFERASE LIKE 6 description:Winged helix repressor DNA-binding domain containing protein. (Os04t0175900-01)
Sequence	ACCAACACGCCATATACTAGTTTCAGAATTGAGACACACTGATCATTGTGAGAGAGAAGT AGACCAAACAAGGCAAGCTCGCATGGCTTCGGGCATTAGCAGGACTCCGGCCACGGGTGT CACCGCCGGCGGCGGCGACGACGAGGAGGCGGCATGGTTGCACGCGCTTGAGCTGATCTC GGGCTTCACCGTCTCCATGACACTGAAGGCGGCGATCCAGCTCGGACTCATCGACGCACT TACCGCCGCCGCCGACGGCCGCGCGCTGACCGCCGGCGAGCTGGTTGCGCAGCTCCCGGC GGTGGACGATGCCGAGGCGGCGACCTCGGTGGACCGGATGCTGCGGCTCCTGGCGTCGTT CAACGTCGTCAGGTGCTCGACGGAGGCGGGGCCTGGCGGTGATCCTCTCCGGCGCTACTC GCCGGCGCCTGTGTGCAGGTGGTTCACCGCCGGCGACAACCACCAAGGGTCTCTGGCACC CAGGCTCATGCTCGACGTCGACGAAGACAATCTGAGCACCTGGCATCAGATGGCGGCGGC GGTCGTCAGCGGTGGGCCATCGGCGTTCGAGAGGGCGCACGGGATGCCATTGTTTGAGTA CATGGGGACGAACCACCGGTTCAATATGCTGTTCAACCAGGCCATGTCGCAGCAGTCCAT GATGGTGATGAACAAGCTGCTAGACCGCTTCCATGGGTTTGATGGCATCAGTGTCCTCGT CGACGTCGGCGGGGGCACCGGCGTCACCCTGAAGATGATCATCTCCCGGTATAAGCACAT TACTGGTGTCAACTTCGACTTACCCCACGTCATATCTCAGGCTCCATCTCTTCCGGGTGT GAATCATGTAGCTGGAAATATGTTTGAGAGCGTACCTAAAGGAGATGCAATTTTCTTGAA GTCGATGCTCCTACGAAACGATGAGGAGTGCATCAAGATTCTCAAGAACTGCCACTATGC TCTCTCAGACAATGGGAAGGTGATTGTTGTTGATATTGTTCTCCCTGAAACCCCAAAACC GGTACCCGAAGCACAAAACCCACTCCGGATGGACGTTATGATGCTCAACAATCTTCGTGG AGGAAAGATAAGGACAGAGCAGGAGTACGCGAAGCTAGCTATGGATTCTGGCTTCAGTGG TTCCTTCCGGACAACCTACATTTTCGCCAACTTTATGGCAATTGAACTATGCAAGTAGCT CTTGAAAATCATGTCAAGTTCGTATTACTCCCTTCATCACTAACTGAACTTTTGGCTATG TATGTAGACAATCATTTTGCTCAGATATCTTGTCCATATGTACAGCCAAATGCTCACGAA GGAGTATGTATTTCAATGTGTAATTGTGTATGGCTAACACTATACCATTCAATGGTCTGA AAATTAAAAACTTTTCTTC