Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0175500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:5152089:5152757:-1 gene:Os04g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 12 description:Transferase domain containing protein. (Os04t0175500-00)
Sequence

ATGCTGAGCCTGGAGACCAAGCGGTTCGCGTACCTCGACATCACCATCCCGTCGACCATG
ATCGAACGCGTCAAGGCGGAGTACGCCGCCGCCGCCGGCAACGTGGACTCCGGCGAGCCG
TGCACCGTGTTCGAGGCGGTCACCGCCGCGCTGTGGCGGAGCCGCACGCGCGCGGTCATC
TCCTCCGACGACCCCGACGCGCCCGCGCCGCTCGTCTTCGCGGCCAACGCGCGCAAGCAC
GTCGGCGCCAAGGAGGGCTACTACGGCAACTGCGTCACCTCGCAGGTGGCCGTGCCGACG
AGCGACGAGGTGGCGAACGGCGACCTCAAGCACGTCGTCAGGCTGATCCGGCGAGCCAAG
GAGGAGATACCGTTGCAGTTCAAGAACGCCGGCGGCGGTGGCATGAACGGGAAACGCGTC
AAGCAGCTGGCCGGCGTGCTGTTCGGGTACAGCGCGTTCTACGTGGCGAGCTGGCGGAAC
ATCGGGTTCGAGGCGCCGGACTTCGGCGGCGGGCGGGCGGCGCGGGTGATGTGCCACTTC
GAGCCGACGGGCGTGCCGAGCTGCGTGGCGTGCCTGCCGCGCGACGGCGGCGGCGCCAGC
GTTCTGTCGCTCTGCGTCAGGGACGAGCACGTCGACGCGTTCCTCGCAGAATTGGCAACT
CTCGGCTGA

Peptide Sequence

PEP ID

Os04t0175500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:5152089:5152757:-1 gene:Os04g0175500 transcript:Os04t0175500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 12 description:Transferase domain containing protein. (Os04t0175500-00)
Sequence

MLSLETKRFAYLDITIPSTMIERVKAEYAAAAGNVDSGEPCTVFEAVTAALWRSRTRAVI
SSDDPDAPAPLVFAANARKHVGAKEGYYGNCVTSQVAVPTSDEVANGDLKHVVRLIRRAK
EEIPLQFKNAGGGGMNGKRVKQLAGVLFGYSAFYVASWRNIGFEAPDFGGGRAARVMCHF
EPTGVPSCVACLPRDGGGASVLSLCVRDEHVDAFLAELATLG

Transcript Sequence

Transcript ID

Os04t0175500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:5152089:5152757:-1 gene:Os04g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 12 description:Transferase domain containing protein. (Os04t0175500-00)
Sequence

ATGCTGAGCCTGGAGACCAAGCGGTTCGCGTACCTCGACATCACCATCCCGTCGACCATG
ATCGAACGCGTCAAGGCGGAGTACGCCGCCGCCGCCGGCAACGTGGACTCCGGCGAGCCG
TGCACCGTGTTCGAGGCGGTCACCGCCGCGCTGTGGCGGAGCCGCACGCGCGCGGTCATC
TCCTCCGACGACCCCGACGCGCCCGCGCCGCTCGTCTTCGCGGCCAACGCGCGCAAGCAC
GTCGGCGCCAAGGAGGGCTACTACGGCAACTGCGTCACCTCGCAGGTGGCCGTGCCGACG
AGCGACGAGGTGGCGAACGGCGACCTCAAGCACGTCGTCAGGCTGATCCGGCGAGCCAAG
GAGGAGATACCGTTGCAGTTCAAGAACGCCGGCGGCGGTGGCATGAACGGGAAACGCGTC
AAGCAGCTGGCCGGCGTGCTGTTCGGGTACAGCGCGTTCTACGTGGCGAGCTGGCGGAAC
ATCGGGTTCGAGGCGCCGGACTTCGGCGGCGGGCGGGCGGCGCGGGTGATGTGCCACTTC
GAGCCGACGGGCGTGCCGAGCTGCGTGGCGTGCCTGCCGCGCGACGGCGGCGGCGCCAGC
GTTCTGTCGCTCTGCGTCAGGGACGAGCACGTCGACGCGTTCCTCGCAGAATTGGCAACT
CTCGGCTGA