Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0173800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:5005112:5006206:-1 gene:Os04g0173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lectin precursor (Agglutinin). (Os04t0173800-01)
Sequence	ATGACCATGACGTCGACGACGACGAAGGCCATGGCGATGGCGGCGGCGGTCCTCGCCGCC GCCGCCGTCGCGGCGACGAACGCGCAGACGTGCGGGAAGCAGAACGACGGCATGATCTGC CCGCACAACCTGTGCTGCAGCCAGTTCGGGTACTGCGGCCTCGGCCGCGACTACTGCGGC ACGGGGTGCCAGAGCGGCGCCTGCTGCTCCAGCCAGCGCTGCGGCAGCCAGGGCGGCGGC GCCACCTGCTCCAACAACCAGTGCTGCAGCCAGTACGGCTACTGCGGCTTCGGCTCCGAG TACTGCGGCTCCGGGTGCCAGAACGGGCCGTGCCGCGCCGACATCAAGTGCGGCCGCAAC GCCAACGGCGAGCTCTGCCCCAACAACATGTGCTGCAGCCAGTGGGGATACTGCGGCCTC GGCAGCGAGTTCTGCGGCAACGGATGCCAGAGCGGCGCGTGCTGCCCGGAGAAGCGGTGC GGCAAGCAGGCCGGCGGGGACAAGTGCCCCAACAACTTCTGCTGCAGTGCCGGCGGCTAC TGCGGCCTCGGCGGCAACTACTGCGGCTCCGGCTGCCAGAGCGGCGGCTGCTACAAGGGT GGCGACGGCATGGCGGCCATCCTGGCTAACAACCAGAGCGTCTCTTTCGAAGGGATCATC GAGTCAGTGGCTGAGCTTGTGTAG

Peptide Sequence

PEP ID	Os04t0173800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:5005112:5006206:-1 gene:Os04g0173800 transcript:Os04t0173800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lectin precursor (Agglutinin). (Os04t0173800-01)
Sequence	MTMTSTTTKAMAMAAAVLAAAAVAATNAQTCGKQNDGMICPHNLCCSQFGYCGLGRDYCG TGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPCRADIKCGRN ANGELCPNNMCCSQWGYCGLGSEFCGNGCQSGACCPEKRCGKQAGGDKCPNNFCCSAGGY CGLGGNYCGSGCQSGGCYKGGDGMAAILANNQSVSFEGIIESVAELV

Transcript Sequence

Transcript ID	Os04t0173800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:5005112:5006206:-1 gene:Os04g0173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lectin precursor (Agglutinin). (Os04t0173800-01)
Sequence	AGGCACTCATCGAGCTACATTTTGCTAACTATCCAGTACCAAGAACGGAGCTGCAAGGAA GAGACGTACGATGACCATGACGTCGACGACGACGAAGGCCATGGCGATGGCGGCGGCGGT CCTCGCCGCCGCCGCCGTCGCGGCGACGAACGCGCAGACGTGCGGGAAGCAGAACGACGG CATGATCTGCCCGCACAACCTGTGCTGCAGCCAGTTCGGGTACTGCGGCCTCGGCCGCGA CTACTGCGGCACGGGGTGCCAGAGCGGCGCCTGCTGCTCCAGCCAGCGCTGCGGCAGCCA GGGCGGCGGCGCCACCTGCTCCAACAACCAGTGCTGCAGCCAGTACGGCTACTGCGGCTT CGGCTCCGAGTACTGCGGCTCCGGGTGCCAGAACGGGCCGTGCCGCGCCGACATCAAGTG CGGCCGCAACGCCAACGGCGAGCTCTGCCCCAACAACATGTGCTGCAGCCAGTGGGGATA CTGCGGCCTCGGCAGCGAGTTCTGCGGCAACGGATGCCAGAGCGGCGCGTGCTGCCCGGA GAAGCGGTGCGGCAAGCAGGCCGGCGGGGACAAGTGCCCCAACAACTTCTGCTGCAGTGC CGGCGGCTACTGCGGCCTCGGCGGCAACTACTGCGGCTCCGGCTGCCAGAGCGGCGGCTG CTACAAGGGTGGCGACGGCATGGCGGCCATCCTGGCTAACAACCAGAGCGTCTCTTTCGA AGGGATCATCGAGTCAGTGGCTGAGCTTGTGTAGATCGATGAGTCGATCGTCGCCATGAG CGTTTTCTGCTTTGTATGCCTCTCGGCGTACAGGGCTTTTCAGCTTAGCTGCCTTTCAAT AAAATCACTGATCATGGCGATCGACATGCAGAGCAGTGTTGTGTACGTAGTTGCTCATCT GAATAAATAAAGGGGCTGAGCCTGAGCTGCTGCCTAGCTCGCACCAACAGAGTCCGGCCG GGAGGAGTTGTAGTTTCTGAAGGTGAGCTAGCTAGCTTTGGGATCGATGTATGGATCAGC AATGTAACAATGTGTTGTGGAAGCCCGTAGCTACTAACTAGCTCATTGGTGCATGAAATA TATGTCATTATCTGC