Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0168400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:4690898:4692354:1 gene:Os04g0168400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Embryogenesis transmembrane protein. (Os04t0168400-01)
Sequence

ATGGCAGGCGAGCAAGGTTCAGCTATGGCCAACAGAGGAGGCCGGGCAAATCGGAAAGAA
GGGGAGGACGAGCTACGAGGCTGGCTGATGTTGCTGGCGACGCTGACGGCGTCCATCACG
TACGCGGCGGCGCTGAACCCTCCCGGCGGCGTCTGGCAAGCCGACGACGCCGCCAAGGAC
TTCGTCGCCGGCTACCCGGTCCTCCTCGACAAGTCGCCGTGGCGCTACTACGTCTTCTAC
TACTGCAACGCCACCTCCTTCGCGTCGTCCGTGTGCATCATCGTCCTGCTCGCCACCAAC
TTCTACCTGAGCCATACCAGTGTCATGGTCTTCAACGTGCTCGTCGCCCTGGACATGGCC
AGCTTGGGCGCCGCGTTCGTCGCGGGCTCGTCGAGCAGCAAGCGGTTTACGGCTTTCAAC
GCGGGGCTGATGGTATGCCTCGTCGTGCTGTTCCTCCTGTGGAAACTGAAGTTTCTCATG
GGTAATGATCAAGCAGGTCAAAATCCTGCTAGTGGAGGTGTCGCCAATTTACAACATGGC
AACAGTGCATTATAA

Peptide Sequence

PEP ID

Os04t0168400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:4690898:4692354:1 gene:Os04g0168400 transcript:Os04t0168400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Embryogenesis transmembrane protein. (Os04t0168400-01)
Sequence

MAGEQGSAMANRGGRANRKEGEDELRGWLMLLATLTASITYAAALNPPGGVWQADDAAKD
FVAGYPVLLDKSPWRYYVFYYCNATSFASSVCIIVLLATNFYLSHTSVMVFNVLVALDMA
SLGAAFVAGSSSSKRFTAFNAGLMVCLVVLFLLWKLKFLMGNDQAGQNPASGGVANLQHG
NSAL

Transcript Sequence

Transcript ID

Os04t0168400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:4690898:4692354:1 gene:Os04g0168400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Embryogenesis transmembrane protein. (Os04t0168400-01)
Sequence

AGTAATGCCCATGGTCTTTTTCTACATATGTCATTTTGACAATCTAGCAACACACAACAA
TAATCGTCATTTGATACATATTCCATGAATGATTGATCTCTTTTGCATTTGTTCGTCCCT
TTCGTTTTCAACTTGTTTGCAGGCTGTGTTGGCTGCATCAGGTCAGCAATTAATCTAGCT
AGTCATCTACGGCTAGATAACCCTTGCAGTTCTCGTCTACACACTTCTCTTTGCGAGAGC
CGTTGTTCATCATGGCAGGCGAGCAAGGTTCAGCTATGGCCAACAGAGGAGGCCGGGCAA
ATCGGAAAGAAGGGGAGGACGAGCTACGAGGCTGGCTGATGTTGCTGGCGACGCTGACGG
CGTCCATCACGTACGCGGCGGCGCTGAACCCTCCCGGCGGCGTCTGGCAAGCCGACGACG
CCGCCAAGGACTTCGTCGCCGGCTACCCGGTCCTCCTCGACAAGTCGCCGTGGCGCTACT
ACGTCTTCTACTACTGCAACGCCACCTCCTTCGCGTCGTCCGTGTGCATCATCGTCCTGC
TCGCCACCAACTTCTACCTGAGCCATACCAGTGTCATGGTCTTCAACGTGCTCGTCGCCC
TGGACATGGCCAGCTTGGGCGCCGCGTTCGTCGCGGGCTCGTCGAGCAGCAAGCGGTTTA
CGGCTTTCAACGCGGGGCTGATGGTATGCCTCGTCGTGCTGTTCCTCCTGTGGAAACTGA
AGTTTCTCATGGGTAATGATCAAGCAGGTCAAAATCCTGCTAGTGGAGGTGTCGCCAATT
TACAACATGGCAACAGTGCATTATAAATTTATAATAATGTAAATAAATTTCTCTGATTTA
ATCATGTCATGGTAGATGTATACCGGATATAATGCCTGCTGCCTGGCACTTTGCTATGGA
ACCTAATGATGAATTTATACGTTAAATAATGTTGAAATATGGTATATGGATATATTTTAA
AATTTAATATTATGGAAATGATGTCGAGG