Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0166400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:4509613:4513848:-1 gene:Os04g0166400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.2 protein. (Os04t0166400-01)
Sequence	ATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGC GCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACC GTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCG GCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCC GCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCC GTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCC GCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAAC GACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCA CTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGAC ATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACC ATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTG TTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATA TTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAA AAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTG ATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATT ATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACG AGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGG ACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAG GTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAA GGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCAT GTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGA TTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTC AAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCAT ATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTA CTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAG GATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGAC AGTTCCAAGT

Peptide Sequence

PEP ID	Os04t0166400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:4509613:4513848:-1 gene:Os04g0166400 transcript:Os04t0166400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.2 protein. (Os04t0166400-01)
Sequence	MDSAGVILSILSKLQSLGFCAHLRIGDAAASGPPSDLFDTVLAAFLREVYPGGREVRPLP AKLGDGSRVDLLRLFSAIRAAGGYAATSSSPAVWASAAESVCLDATLAAPVKLIYHKYLA ALDRWIQRLVEAHGPFLDGNDGRKKPEPFFDSNGRENEEPLLECNGGDLQHPILKRKRED MVGMLDWVRELAENGGEAGTMAAGSANGYYSLALAARKAVFAKRARRSSMTMNGALMQEI FPMDCKCCMSSSTTGIDTQEKCSKKIQLVIPQAGSDINELINVVENINVPSIGMEQENNI IGQAKYESRKHHNSDNWLFTSQQRNKIPVGSEFQAQVPQWTGELPVSYDNAETRKWLGTK VWPLENGNRKLSYFCNPVGKGREGVCGCNLPGSVECVRFHVAERRLQLRRELDSAFYAWG FDRMGEEIALSWTDKEEANFKACVQLNAPSSGRNFWKRLHMLFQSKGRKELVSYYFNCFL LRRRCYQNRMTPNNIDSDDEDETEFGFLGNRLGHNATKYDSSK

Transcript Sequence

Transcript ID	Os04t0166400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:4509613:4513848:-1 gene:Os04g0166400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.2 protein. (Os04t0166400-01)
Sequence	GCACAAAAAAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGC GAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCA GTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTC GGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGA GGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTT CTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGC CTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTA CCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACC CTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAG GGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAA GAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGG CGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGC AGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGC ACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGG AATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTC AGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGA GCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGA CAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGC ACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAA ATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTG TAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGA ATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGC TTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAA AGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTT CTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTA TTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACAT AGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAA TGCAACTAAGTATGACAGTTCCAAGT