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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0165600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:4452696:4455350:1 gene:Os04g0165600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 3, TYPE I SIGNAL PEPTIDASE 3 description:Peptidase S26A, signal peptidase I family protein. (Os04t0165600-01)
Sequence

ATGGCAGGGCCATGGCCCCTCCTCCGGTCGTTCCTGAGGAACTGCGTCGCCGGAACCCTC
GTCGTCGTCACCGTCAACGACCGGTACGCCTCCGTCATCACCGTGCGTGGCACCTCCATG
AACCCCACCTTGGAGTCCCAACAAGGTGACCGCGCGCTGGTGAGCCGGCTCTGCCTCGAC
GCCCGCTACGGATTGTCCCGCGGCGACGTCGTCGTCTTCCGGTCGCCGACGGAGCACCGG
AGCTTGTTGGTGAAGAGGTTGATCGCGTTGCCCGGCGACTGGATCCAGGTGCCGGCGGCT
CAGGAGATCCGGCAGATACCCGTGGGGCACTGCTGGGTGGAAGGGGATAATCCTGACGTC
AGCTGGGACTCGCGAAGCTATGGCCCTATTCCTCTCGGTCTGATGCAGGGGAGGGTCACA
CACATAGTCTGGCCACCAAATAGAATTGGCCCAGTTGAGAGAAAGATGCCAGAAGGAAGA
GTAATGCAGCGATGA

Peptide Sequence

PEP ID

Os04t0165600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:4452696:4455350:1 gene:Os04g0165600 transcript:Os04t0165600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 3, TYPE I SIGNAL PEPTIDASE 3 description:Peptidase S26A, signal peptidase I family protein. (Os04t0165600-01)
Sequence

MAGPWPLLRSFLRNCVAGTLVVVTVNDRYASVITVRGTSMNPTLESQQGDRALVSRLCLD
ARYGLSRGDVVVFRSPTEHRSLLVKRLIALPGDWIQVPAAQEIRQIPVGHCWVEGDNPDV
SWDSRSYGPIPLGLMQGRVTHIVWPPNRIGPVERKMPEGRVMQR

Transcript Sequence

Transcript ID

Os04t0165600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:4452696:4455350:1 gene:Os04g0165600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 3, TYPE I SIGNAL PEPTIDASE 3 description:Peptidase S26A, signal peptidase I family protein. (Os04t0165600-01)
Sequence

ACAAACCAGTAAAAATATACGCCAAAACGCGCCGCCGCAAGCTCGCCACTCTGAGCCGCC
GCGCCGCCGCCGTCGCAGAATCGAAGGTGGTGGCGCCATCATCGGGCTGGTAGGCACACG
ACCCACTCCTCCTCCTCCTCCTCGGCCATGGCAGGGCCATGGCCCCTCCTCCGGTCGTTC
CTGAGGAACTGCGTCGCCGGAACCCTCGTCGTCGTCACCGTCAACGACCGGTACGCCTCC
GTCATCACCGTGCGTGGCACCTCCATGAACCCCACCTTGGAGTCCCAACAAGGTGACCGC
GCGCTGGTGAGCCGGCTCTGCCTCGACGCCCGCTACGGATTGTCCCGCGGCGACGTCGTC
GTCTTCCGGTCGCCGACGGAGCACCGGAGCTTGTTGGTGAAGAGGTTGATCGCGTTGCCC
GGCGACTGGATCCAGGTGCCGGCGGCTCAGGAGATCCGGCAGATACCCGTGGGGCACTGC
TGGGTGGAAGGGGATAATCCTGACGTCAGCTGGGACTCGCGAAGCTATGGCCCTATTCCT
CTCGGTCTGATGCAGGGGAGGGTCACACACATAGTCTGGCCACCAAATAGAATTGGCCCA
GTTGAGAGAAAGATGCCAGAAGGAAGAGTAATGCAGCGATGACTTTTGAATCTCTTGTTA
GGTTGGCTAATACAGTTTTTCCCCAACTGGAGTAGGATACAGGTTCAGAAGCCTCAAGAT
TAATTGTACTATCAAAGACAGTGAAGTAAGAATGTCATGGTCATTGGGAATTTCATTCCT
AATGGCACTGAAGTTGATTCTCCTTCCAGAGTTCGTTGCAGAATGCATGGTTAGAAGTTT
TGCTTCTTGCAGCCCTTAGATATGAACGATGCAATGCTGAAATATTGCAAATTTCATTGG
AGAGAGGAATCATTGACATCTTCAGTTCAAATTTATTATGATCTGTCACCTGTTGCGGTT
GGAAAGCAGAAACAAGTATTGCTATTTAAAATGAGCACTGTAGCAATTTTTC