Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0165400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:4441922:4443953:-1 gene:Os04g0165400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hrf1 family protein. (Os04t0165400-01)
Sequence

ATGTACAACAATTATGGAAATTCTCCTGGAATGCAGATGCCTCCTATAGGGCAGATGCCT
CCTGCCGCAGGGCAGATGCCCTCGGCAAATCCTCAGCCTGGCCAATTTGGCAATCCATTT
TATGGTGCGAGCTCAGGTCTAATTAAAACTGGGTTAGGAGCATATGGAGAGAAGTTCCTT
GGTTCCAGTTCGGAATTCATGCAAAGCAATATTAACAGATACTTCTCCAACCCGCAGTAC
TATTTCCATGTGAATGATCAGTATGTCAGGAACAAGCTGAAAGTTATACTGTTTCCGTTC
CTTCACAGGGGGCATTGGACTAGGATAAGTGAGCCTGTTGGTGGCCGACTGTCGTACAAA
CCTCCAATCTATGACATCAATGCACCGGATCTTTACATCCCTTTCATGGCATTCGGTAGC
TTCATTATTCTTGCGGGCTTTACATTAGGTTTCATGGGAAAGTTTACTCCAGAAGCTATA
AATCTGCAGTTCAGCAGAGGACTCATTGGATGGGCCTTGCAGATTGTGATCCTGAAAGGG
CTGCTCTACTCGATGGGCGGTGGAGAGGTGCCGCTGCTCGACCTGGTAGCTTATGGCGGA
TATCTATTTGCCGGGCTTTCCCTTGCTGTCATCTCGAGGCTTCTGTGGGCTTACTCGTAC
TTCGTTATGATGCCATGGATGAGCCTTTGTATGGGGGTGTTCTTGGTGAGGACGATGAAG
AGGGTGCTCTTCACGGAGATGAGGAGCAGCGAGAGGCACTCGACGCGGCAGCACTATTTC
CTGCTCTTCCTGGCAATTTCGCAATTCCCCCTGTTCTTCTGGCTTGGCAACATAGGTGCA
TGA

Peptide Sequence

PEP ID

Os04t0165400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:4441922:4443953:-1 gene:Os04g0165400 transcript:Os04t0165400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hrf1 family protein. (Os04t0165400-01)
Sequence

MYNNYGNSPGMQMPPIGQMPPAAGQMPSANPQPGQFGNPFYGASSGLIKTGLGAYGEKFL
GSSSEFMQSNINRYFSNPQYYFHVNDQYVRNKLKVILFPFLHRGHWTRISEPVGGRLSYK
PPIYDINAPDLYIPFMAFGSFIILAGFTLGFMGKFTPEAINLQFSRGLIGWALQIVILKG
LLYSMGGGEVPLLDLVAYGGYLFAGLSLAVISRLLWAYSYFVMMPWMSLCMGVFLVRTMK
RVLFTEMRSSERHSTRQHYFLLFLAISQFPLFFWLGNIGA

Transcript Sequence

Transcript ID

Os04t0165400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:4441922:4443953:-1 gene:Os04g0165400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hrf1 family protein. (Os04t0165400-01)
Sequence

GAAGAAATCGAAGCCGCGCTTCCCCTCTCCGCCTCCGCCTCCGATCTGCTGCGGCGGCGC
GATCCGGCAGCCGGCGACCTCCCTCCGCCTCCTTCCCGACCCTTTCGTAGCTTTCTCAAT
CCCCTCCCCCCCTCCTCGCGGCGCGCGCACGGCCGGCTGAGAAGGTTTCCGAGGGGGCCG
ACCTCCTTCTAGCCATGTACAACAATTATGGAAATTCTCCTGGAATGCAGATGCCTCCTA
TAGGGCAGATGCCTCCTGCCGCAGGGCAGATGCCCTCGGCAAATCCTCAGCCTGGCCAAT
TTGGCAATCCATTTTATGGTGCGAGCTCAGGTCTAATTAAAACTGGGTTAGGAGCATATG
GAGAGAAGTTCCTTGGTTCCAGTTCGGAATTCATGCAAAGCAATATTAACAGATACTTCT
CCAACCCGCAGTACTATTTCCATGTGAATGATCAGTATGTCAGGAACAAGCTGAAAGTTA
TACTGTTTCCGTTCCTTCACAGGGGGCATTGGACTAGGATAAGTGAGCCTGTTGGTGGCC
GACTGTCGTACAAACCTCCAATCTATGACATCAATGCACCGGATCTTTACATCCCTTTCA
TGGCATTCGGTAGCTTCATTATTCTTGCGGGCTTTACATTAGGTTTCATGGGAAAGTTTA
CTCCAGAAGCTATAAATCTGCAGTTCAGCAGAGGACTCATTGGATGGGCCTTGCAGATTG
TGATCCTGAAAGGGCTGCTCTACTCGATGGGCGGTGGAGAGGTGCCGCTGCTCGACCTGG
TAGCTTATGGCGGATATCTATTTGCCGGGCTTTCCCTTGCTGTCATCTCGAGGCTTCTGT
GGGCTTACTCGTACTTCGTTATGATGCCATGGATGAGCCTTTGTATGGGGGTGTTCTTGG
TGAGGACGATGAAGAGGGTGCTCTTCACGGAGATGAGGAGCAGCGAGAGGCACTCGACGC
GGCAGCACTATTTCCTGCTCTTCCTGGCAATTTCGCAATTCCCCCTGTTCTTCTGGCTTG
GCAACATAGGTGCATGAAAACATTTTTCTGGTTGCGGTTTGTCGGTATAATAGTTAAACC
GTGGTGTTTAGGTTCATTGTAAAATAGTTTTTCAATAGATTTCAACAGCTTGTGTCGTTT
GTCCATTAGAGTATGTTTATCGACAGGGTTTGGTAGATATGTGCCGATGTAAGTTTATGA
GTTCATAACTGGATTTATGTTCGATCTCCGTAAAATATATATACAAAAATTTTGTTT