Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0165300-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:4436888:4441515:1 gene:Os04g0165300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0165300-01);Conserved hypothetical protein. (Os04t0165300-02)
Sequence

ATGGCTGATAACGACAAGGAGGCGGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGG
GAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGA
GACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAA
GGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCAC
TTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATC
CAGCATAAGAAGGATGCGCAGGAAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAAT
GTCGGTGGGAACTATGGTGCTGGGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAAC
CTCTCGGCCAATGATGTAGAGATGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCAT
GCTCAGGACGAGGAGCAAGGTTTAGATGATGATAATGATTTTGATGACTCTCATGACAAA
TCAGATCTGCCCTCAGAATCTGCGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAA
TGCTGGCTGAAGAAACATATGTCATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTC
TGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAA
GACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGA

Peptide Sequence

PEP ID

Os04t0165300-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:4436888:4441515:1 gene:Os04g0165300 transcript:Os04t0165300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0165300-01);Conserved hypothetical protein. (Os04t0165300-02)
Sequence

MADNDKEAAGEGATPRGADWEVVTLTASAYAAAPGPGGAGDRPAAETKGLDASQEGDQTK
GLDGSQEGRGSESALFMSGHFVFPPSEHENLPIDAGFDDIQHKKDAQEASTSVEDEGFKN
VGGNYGAGLERIQFYDEGRNLSANDVEMMMGDAAEHGSFHAQDEEQGLDDDNDFDDSHDK
SDLPSESADSKSRDSGAPCKCWLKKHMSCLYHQAKETNALWSVVVAAALVGLVILGRWHK
DKLHLKNLKWRSGSTVRG

Transcript Sequence

Transcript ID

Os04t0165300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:4436888:4441515:1 gene:Os04g0165300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0165300-01);Conserved hypothetical protein. (Os04t0165300-02)
Sequence

ACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTC
TCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCAT
CCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGCGGCGGGAGAGGGAGC
AACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGC
GCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAG
TCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAG
CGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGAT
CGATGCCGGCTTTGATGACATCCAGCATAAGAAGGATGCGCAGGAAGCGAGCACGAGCGT
GGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTGGGTTGGAGAGGATTCA
GTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGATGATGATGGGTGATGC
TGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTTTAGATGATGATAATGA
TTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTGCGGACAGCAAAAGCCG
TGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGTCATGCCTGTATCACCA
AGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGT
AATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGG
CTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGC
AACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGA
TTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCT
TGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACA
CACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGC
TGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAA
TTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTCGTTTACTGTTC
CTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTC