Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0162600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:4309095:4310448:-1 gene:Os04g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF295 family protein. (Os04t0162600-01)
Sequence	ATGCGCGCGCCGCCGCCGTCGCCGGCGGTGGCGAGGACAGGATTCTCCGACCTCCAGCCA GACCTGGTGGGCGAGATCCATGGCCGCCTCAGCTTCCTCGACCGCCTAGCCTTCGTGGCG GTCTCCTCCGCCGCGTCACGCGACGCGTTGAAGCCGGAGCCGCCGTGGCTGGTCCTCCCG GGCGAGACTCCGGAGACCGCCACGGTCTTCTCCCTCGCCGACCGCCGCTCCGCCACCGTG CGCGCCTCGGGACCCGCGATGCGCGGCCACGTCATCATCGGCTCCTTCGGCGGCTGGATC GTGACCGCCGACGAGCGTGGGCGGATGCGCCTCGCCAACCCCGTCACCGGCGATCAGGGC GACCTCCCGGCCATCACCACCATCCCCTTCGTCAACGCCACCTCGCCGTGGGGTCACCAT TTCATCATGGACATGGAACCCTTCGTCCACATCCGGTACAGAGGCGACCACGAGTCGTGG CCGCACCCGTACGGCACGTTCACACACACCGCCGGCGACATCCGCCTCTGGTTCTACCGC AAGGTCGTCCTCTCCGCCTCGCCGCGCCCCGGCGACTACGCCGCCATGCTCCTCTTGGAC AGCTACTTCGGCGCGCCGGCGTTCGCCACGGCGGGGGACGGCCGGTGGAGGGTCGCGCCC TCGCGCGACGGCGTCGAGGACGCGATCCACCACGGGGGCAAGTTCTTGTCCGTCACGTAC ACCGGCATCGTGGAGGCGTGGGAACGCGACGGTGTCTCCGGCGAGTTCACCGGCAAGGTG GTGACCACGCCGATCTCATGCCCCCCGCAGCGCCGCAAGTACCTGGCGGCGGCGCCGGAC GGGCGGCTGATGATCGTGCTCAAGAACACCAATGGCGGCGTCAAGAAAGGCTACTTCGAG GTGCAGGTGTTCGACGAAATGACGCAACGGTGGGAGGCGGCGGAGGACATCGGCGAGCTC GCTATCCTCGTCGGCGTGAACAGCTCGGTGTGCGTGTCGACGGCGAAACACCCGGAGCTC AAGGGCGGATGCGTGTACTACACTGACGACGAGATCGGGAAGGCATGGCTGCGGAGAGAG TACGGGTACAGCAACAGCAAGCCGAACGTGGGGGTGTACAGCCTCAAAGACGGCAAGGAG ATGAGCATCCCGGGGCTCGGCGAGCACCTCAGCTGGCCGCCGCCGGCGTGGTTCACGCCT TCCTTCCGGTGA

Peptide Sequence

PEP ID	Os04t0162600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:4309095:4310448:-1 gene:Os04g0162600 transcript:Os04t0162600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF295 family protein. (Os04t0162600-01)
Sequence	MRAPPPSPAVARTGFSDLQPDLVGEIHGRLSFLDRLAFVAVSSAASRDALKPEPPWLVLP GETPETATVFSLADRRSATVRASGPAMRGHVIIGSFGGWIVTADERGRMRLANPVTGDQG DLPAITTIPFVNATSPWGHHFIMDMEPFVHIRYRGDHESWPHPYGTFTHTAGDIRLWFYR KVVLSASPRPGDYAAMLLLDSYFGAPAFATAGDGRWRVAPSRDGVEDAIHHGGKFLSVTY TGIVEAWERDGVSGEFTGKVVTTPISCPPQRRKYLAAAPDGRLMIVLKNTNGGVKKGYFE VQVFDEMTQRWEAAEDIGELAILVGVNSSVCVSTAKHPELKGGCVYYTDDEIGKAWLRRE YGYSNSKPNVGVYSLKDGKEMSIPGLGEHLSWPPPAWFTPSFR

Transcript Sequence

Transcript ID	Os04t0162600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:4309095:4310448:-1 gene:Os04g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF295 family protein. (Os04t0162600-01)
Sequence	AGATCAGTAATCTGCGTACGCTCCTATCGCCTAACCCTATAACGTAATATTCGAGAAATC GTTCCGGCGATGCGCGCGCCGCCGCCGTCGCCGGCGGTGGCGAGGACAGGATTCTCCGAC CTCCAGCCAGACCTGGTGGGCGAGATCCATGGCCGCCTCAGCTTCCTCGACCGCCTAGCC TTCGTGGCGGTCTCCTCCGCCGCGTCACGCGACGCGTTGAAGCCGGAGCCGCCGTGGCTG GTCCTCCCGGGCGAGACTCCGGAGACCGCCACGGTCTTCTCCCTCGCCGACCGCCGCTCC GCCACCGTGCGCGCCTCGGGACCCGCGATGCGCGGCCACGTCATCATCGGCTCCTTCGGC GGCTGGATCGTGACCGCCGACGAGCGTGGGCGGATGCGCCTCGCCAACCCCGTCACCGGC GATCAGGGCGACCTCCCGGCCATCACCACCATCCCCTTCGTCAACGCCACCTCGCCGTGG GGTCACCATTTCATCATGGACATGGAACCCTTCGTCCACATCCGGTACAGAGGCGACCAC GAGTCGTGGCCGCACCCGTACGGCACGTTCACACACACCGCCGGCGACATCCGCCTCTGG TTCTACCGCAAGGTCGTCCTCTCCGCCTCGCCGCGCCCCGGCGACTACGCCGCCATGCTC CTCTTGGACAGCTACTTCGGCGCGCCGGCGTTCGCCACGGCGGGGGACGGCCGGTGGAGG GTCGCGCCCTCGCGCGACGGCGTCGAGGACGCGATCCACCACGGGGGCAAGTTCTTGTCC GTCACGTACACCGGCATCGTGGAGGCGTGGGAACGCGACGGTGTCTCCGGCGAGTTCACC GGCAAGGTGGTGACCACGCCGATCTCATGCCCCCCGCAGCGCCGCAAGTACCTGGCGGCG GCGCCGGACGGGCGGCTGATGATCGTGCTCAAGAACACCAATGGCGGCGTCAAGAAAGGC TACTTCGAGGTGCAGGTGTTCGACGAAATGACGCAACGGTGGGAGGCGGCGGAGGACATC GGCGAGCTCGCTATCCTCGTCGGCGTGAACAGCTCGGTGTGCGTGTCGACGGCGAAACAC CCGGAGCTCAAGGGCGGATGCGTGTACTACACTGACGACGAGATCGGGAAGGCATGGCTG CGGAGAGAGTACGGGTACAGCAACAGCAAGCCGAACGTGGGGGTGTACAGCCTCAAAGAC GGCAAGGAGATGAGCATCCCGGGGCTCGGCGAGCACCTCAGCTGGCCGCCGCCGGCGTGG TTCACGCCTTCCTTCCGGTGATGATATATAGTTAGTTCTTGGCCTCTTCATGGTCTTCTA CATACATAATGTTTACATCTTCAGCTTTGCTTTT