Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0161850-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:4261165:4269287:1 gene:Os04g0161850 gene_biotype:protein_coding transcript_biotype:protein_coding description:S-locus glycoprotein domain containing protein. (Os04t0161850-00)
Sequence	GTTGCCTCGAACCCATCCAATGTGTGGTGGCAGAGCTTTGATCACCCAACAGATGTCTTC CTCCCTGGAGTGAAGATTGGCCAGAACAAGATCACTGGTCAGAAATATAGTTTCACTTCA AAGAAGAATTCCGAGAACCCAGCTCTAGGCTTATATTGCATGGAGTTAGACCCCTCTGGC TCTAGGCAATACTATGATATGCTTTGCAACTCGTCCATTGTGTACTTTTCCACCGGGGAG TGGAATGGAAGATACTTCAACTCTGTGCCAGAAATGTCAAGCAATGTTTTTCTTGACTCC AAATTCGTGGACAACGACGAAAAGGACTACTTTACTTACACCCCATTTGATAAAACGGTA ATCACAATCTGCTTGCTTGATGTATCTGTGTTAAGACATCTTCTCTGGGTTGAAGAATTA CAAGATTGGGAAACTGTGTTCATCCAACCCAAGGCTTCATGCGATGTTTCCTCTGTTTGT GGACCTTACACAATCTGCAACGATAATGCACTTACATTGTGCAACTGCATGAAGGGCTTC TCTGTGAAGTCACCAAGGGACTGGGAACTTGATGATAGACGGGAAGGTTGCACAAAAAAT ATTCCACTGGGCTGCAGCAGCAACGAAAGCACAACAGGTTTAACCGATAAGTTCTTTCCC ATACCTAGTGTTAGATTGCCCTATGATGCCCATAGTATCAGTATGGAAACTGTTGCAAGT GCACACGAATGTATCCAGGTTTGTCTGAGAAACTGCTCTTGCACCGCATATTCGCATGGC AGAAGCGGTTGCTCAGTATGGCATGAACAACTTATTAATGTAAAGCAATATAATGGCACT AGCAATACAAATGAAGAGATTTTTTACCACCGCCTTGCTGCTGCAGAGGTGCCAAGTTGG GGACAGAATAGAAGAGAGAAAATAATAGCTGTTGTTGTTGGTGCATCTGTTTCTGCTTTC AGTTTCTTGGCCTTCCTCCTGCTATTGATGATTTGGAGCAAAAGGAGGTCACGTGATTAT CCAATTAATAAAATTAAAGAGGGTGCTTGGGATTGTCGCTTTTAG

Peptide Sequence

PEP ID	Os04t0161850-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:4261165:4269287:1 gene:Os04g0161850 transcript:Os04t0161850-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:S-locus glycoprotein domain containing protein. (Os04t0161850-00)
Sequence	VASNPSNVWWQSFDHPTDVFLPGVKIGQNKITGQKYSFTSKKNSENPALGLYCMELDPSG SRQYYDMLCNSSIVYFSTGEWNGRYFNSVPEMSSNVFLDSKFVDNDEKDYFTYTPFDKTV ITICLLDVSVLRHLLWVEELQDWETVFIQPKASCDVSSVCGPYTICNDNALTLCNCMKGF SVKSPRDWELDDRREGCTKNIPLGCSSNESTTGLTDKFFPIPSVRLPYDAHSISMETVAS AHECIQVCLRNCSCTAYSHGRSGCSVWHEQLINVKQYNGTSNTNEEIFYHRLAAAEVPSW GQNRREKIIAVVVGASVSAFSFLAFLLLLMIWSKRRSRDYPINKIKEGAWDCRF

Transcript Sequence

Transcript ID	Os04t0161850-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:4261165:4269287:1 gene:Os04g0161850 gene_biotype:protein_coding transcript_biotype:protein_coding description:S-locus glycoprotein domain containing protein. (Os04t0161850-00)
Sequence	GTGGCCAAGCCAATGATTTGGTCTAGCCAAATTGAGAATAGACCAGAAACCAGCAGGAAC AATAGTGTAGTGTTGTTAGACAATGGGAACCTTGTTATATGAGTTGCCTCGAACCCATCC AATGTGTGGTGGCAGAGCTTTGATCACCCAACAGATGTCTTCCTCCCTGGAGTGAAGATT GGCCAGAACAAGATCACTGGTCAGAAATATAGTTTCACTTCAAAGAAGAATTCCGAGAAC CCAGCTCTAGGCTTATATTGCATGGAGTTAGACCCCTCTGGCTCTAGGCAATACTATGAT ATGCTTTGCAACTCGTCCATTGTGTACTTTTCCACCGGGGAGTGGAATGGAAGATACTTC AACTCTGTGCCAGAAATGTCAAGCAATGTTTTTCTTGACTCCAAATTCGTGGACAACGAC GAAAAGGACTACTTTACTTACACCCCATTTGATAAAACGGTAATCACAATCTGCTTGCTT GATGTATCTGTGTTAAGACATCTTCTCTGGGTTGAAGAATTACAAGATTGGGAAACTGTG TTCATCCAACCCAAGGCTTCATGCGATGTTTCCTCTGTTTGTGGACCTTACACAATCTGC AACGATAATGCACTTACATTGTGCAACTGCATGAAGGGCTTCTCTGTGAAGTCACCAAGG GACTGGGAACTTGATGATAGACGGGAAGGTTGCACAAAAAATATTCCACTGGGCTGCAGC AGCAACGAAAGCACAACAGGTTTAACCGATAAGTTCTTTCCCATACCTAGTGTTAGATTG CCCTATGATGCCCATAGTATCAGTATGGAAACTGTTGCAAGTGCACACGAATGTATCCAG GTTTGTCTGAGAAACTGCTCTTGCACCGCATATTCGCATGGCAGAAGCGGTTGCTCAGTA TGGCATGAACAACTTATTAATGTAAAGCAATATAATGGCACTAGCAATACAAATGAAGAG ATTTTTTACCACCGCCTTGCTGCTGCAGAGGTGCCAAGTTGGGGACAGAATAGAAGAGAG AAAATAATAGCTGTTGTTGTTGGTGCATCTGTTTCTGCTTTCAGTTTCTTGGCCTTCCTC CTGCTATTGATGATTTGGAGCAAAAGGAGGTCACGTGATTATCCAATTAATAAAATTAAA GAGGGTGCTTGGGATTGTCGCTTTTAGGTATGATCATTTGCAGTGTGCAACCAAAAATTT CTCCGAGAAGCTAGGTGGAGGAGGTTTTGGTTCTATATTCAAAGGAATTCTGAGCGACTC AAATACTATAGCAGTGAAGATGCTTGATGGTGCACGCCAAGGGGAGAAACAGTTCAGGGC TGAGGTCGTACAATTGGGATGATCCAACATGTGAACTTAGTTAAACTAATTGGCTTCTGT TGTGAAGGTGATATAAGGATGCTTGTTTATGAACATATGGTAAATCGGTCTCTTGATGCT CATTTGTTCCGCAACGATGGGACAATTCTGAATTGGAGTACAAGGTACCAGATAGCCGTA GGGGTTGCTAAAGGATTGTCCTACTTGCATGAGAGTTGCCATGATTGTATCATACACTGT GATATTAAGCCAGAAAACATACTTCTTGATGTGTCGTTTGTTCCTAAGGTTGCAGACTTT GGAATGGCAAAACTGCTAGGAAGGGACTTCAGTCGAGTTCTAACAACAATGAGGGGAACC GTAGGATATCTTGTACCTGAATGGATTAGTGGAGTAGCAATTACACAAAAGGTTGATGTC TATAGCTATGGAATGGTTACTGTTGGAAATCATATCAAAGAATGTAAAAGCAGTGCTGAT CAGACTGTTTATTTTCCTGTGCAAGCTGCGCGTAATCTTCTAAAGGGAGATGTGGAGAGT TTGGTCGATCACCAATTACAAGGTGATATCAACATGGAGGAGGTTGAAAGAGCTTGCAAG GTTGCGTGTTGGTGCATTCAAGATGAAGACTTTAATCGACCGACAGTGGGTGACGTGGTT CAGGTGCTAGAGGGTCTAGTAGAACCTGACATGCCCCAAGTGACAAGATTACTTGAAAGT AT