Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0161400-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:4225748:4226837:1 gene:Os04g0161400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102O13.6 protein. (Os04t0161400-00)
Sequence

ATGGAGGCGGCGGCGTTTATTGCCGGGGCTGCCACGGCAAGGGGCTTGCAGTTGTCCCGA
AGGGTGAAGGAGTTGGAGAGCCAAAACACTACACTATCTAATGAGAAGAATGACCTGGAG
AGAAGGGTGAAGAGGTTGGAGTACGAAAACAACAAGCTGTCTAATGAGAAGAGGTGGGCG
GTGGATGTGTACTCAAGAAAGATCTCCACACTAGAATACAGGGTGTGGGAGTTGGATCAC
CAAAACAACAAACTGTCCAGTGAGCTGGTAAGGCAAACGGAGGACACGAGGACAGTGGGT
CTGCTGTTCATGAATGCTGCCGATAGGTACCAACACGTAGCAGAGGTGCAGATTAGGACA
AAGGAAGAGGAATTGGTGAACATGAGGAAGGCAAGCATGCAGTTAATGAACGCTGCTGAT
ACGTACCAAGAAGTAACAAGGAAGCAAATTAAGGCAAAGGAGGATGACCTGGAGGATGCG
AGGAAGGCAATTTTAATGATCATGAATGCTGCTGATACATATCAACAAGTAGCAGAGAAG
AAAATTAAGGATAAGGTGGAGGAATTGAGGGTTCTTGGGGTTCAAAAGGCAGAGATAGAT
GCAAGGATAGCATCATTGGAGTCTAGGCTCGAGGCAGCTCTAGTGAAGAATCAGGAATTG
GAGTCTACTTCTGTTAAGGCGTTGATTGAAAATGATATGCTTTGGTCGGTCATTGAGAGG
CTCATGATGGGCGGACTAGTTGAGGTGAAAGAGGCAGCTGCAAAGGCATCTGATTCTGAA
AAAGTAGAAATCATGAAGGAATTAGAAGACCATAACATGAAGGTGGAGGAAATTCAGACC
AACAAGAATATGACGAAGGGTGAAAATGATAAGATTCAGTCAAAGGTTTTGAGAGAAATG
CAGAAACATAGCTTGTTTGAAGCAAGGGTTGAGAGGCTCAAGATGGAGCTAGATGCGTTG
GTCAAGGCGTAA

Peptide Sequence

PEP ID

Os04t0161400-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:4225748:4226837:1 gene:Os04g0161400 transcript:Os04t0161400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102O13.6 protein. (Os04t0161400-00)
Sequence

MEAAAFIAGAATARGLQLSRRVKELESQNTTLSNEKNDLERRVKRLEYENNKLSNEKRWA
VDVYSRKISTLEYRVWELDHQNNKLSSELVRQTEDTRTVGLLFMNAADRYQHVAEVQIRT
KEEELVNMRKASMQLMNAADTYQEVTRKQIKAKEDDLEDARKAILMIMNAADTYQQVAEK
KIKDKVEELRVLGVQKAEIDARIASLESRLEAALVKNQELESTSVKALIENDMLWSVIER
LMMGGLVEVKEAAAKASDSEKVEIMKELEDHNMKVEEIQTNKNMTKGENDKIQSKVLREM
QKHSLFEARVERLKMELDALVKA

Transcript Sequence

Transcript ID

Os04t0161400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:4225748:4226837:1 gene:Os04g0161400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102O13.6 protein. (Os04t0161400-00)
Sequence

ATGGAGGCGGCGGCGTTTATTGCCGGGGCTGCCACGGCAAGGGGCTTGCAGTTGTCCCGA
AGGGTGAAGGAGTTGGAGAGCCAAAACACTACACTATCTAATGAGAAGAATGACCTGGAG
AGAAGGGTGAAGAGGTTGGAGTACGAAAACAACAAGCTGTCTAATGAGAAGAGGTGGGCG
GTGGATGTGTACTCAAGAAAGATCTCCACACTAGAATACAGGGTGTGGGAGTTGGATCAC
CAAAACAACAAACTGTCCAGTGAGCTGGTAAGGCAAACGGAGGACACGAGGACAGTGGGT
CTGCTGTTCATGAATGCTGCCGATAGGTACCAACACGTAGCAGAGGTGCAGATTAGGACA
AAGGAAGAGGAATTGGTGAACATGAGGAAGGCAAGCATGCAGTTAATGAACGCTGCTGAT
ACGTACCAAGAAGTAACAAGGAAGCAAATTAAGGCAAAGGAGGATGACCTGGAGGATGCG
AGGAAGGCAATTTTAATGATCATGAATGCTGCTGATACATATCAACAAGTAGCAGAGAAG
AAAATTAAGGATAAGGTGGAGGAATTGAGGGTTCTTGGGGTTCAAAAGGCAGAGATAGAT
GCAAGGATAGCATCATTGGAGTCTAGGCTCGAGGCAGCTCTAGTGAAGAATCAGGAATTG
GAGTCTACTTCTGTTAAGGCGTTGATTGAAAATGATATGCTTTGGTCGGTCATTGAGAGG
CTCATGATGGGCGGACTAGTTGAGGTGAAAGAGGCAGCTGCAAAGGCATCTGATTCTGAA
AAAGTAGAAATCATGAAGGAATTAGAAGACCATAACATGAAGGTGGAGGAAATTCAGACC
AACAAGAATATGACGAAGGGTGAAAATGATAAGATTCAGTCAAAGGTTTTGAGAGAAATG
CAGAAACATAGCTTGTTTGAAGCAAGGGTTGAGAGGCTCAAGATGGAGCTAGATGCGTTG
GTCAAGGCGTAA