Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0151900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:3575397:3581555:-1 gene:Os04g0151900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0820C10.4 protein. (Os04t0151900-01)
Sequence

AGGTTTGACAATTCCGATATTCTCAATAGCACATCGAAGTGCAAGATGCCAAAAATAAAG
AGCCTGTCTAATGCTTGTAAAGTATCATTTTCTCCGGATGGGCCCATATCCGATGAAGCA
CTTGAGAGAGTTCGTGCATTGTTAGATGAGATAAGACCTATAGATGTTGGCCTAGACAAT
GAAGCACAGATTGCTCGTAATTGGAATAATTCAACGCGTCAACCAAATGGAAGAAGAGGA
CGTAATGGGGCTAACCAGTTCACATCTCCAATCAAATATTTACACATTCATGAAAGTGAA
AGTTTCTCTATGGGTATATTTTGTATGCCGCCGTCATCAGTTATTCCACTTCACAATCAC
CCAGGAATGACAGTTCTGAGCAAGCTTCTCTATGGCACACTGCATGCTGAATCTTATGAT
TGGATTGATGTAACTGATCCAACCGATCAATTACAGGAACTTTCAGTGAGACCAGCAAGG
CTTGTCAGAGACCGTGAAATGTCTGCTCCAGAGACCACCATTCTTTATCCCAATAGAGGT
GGTAACATCCACACTTTCAGAGCGATCACACCTTGTGCTCTCTTTGATGTCCTTTCTCCT
CCTTATTCTGCTGAGAAGGGGAGGGACTGTTCATACTTCCGGAAGTCTTCAGTAAGGGAA
ACACCACCTGTTGTTTTGCCTGGTGAAATAAATAGCGCAGAAGTAATTTGGTTGGAGGAA
TTGGAGGACCATCAACCTCCAGAGGGCTTTGTTGTCGCGAGAGGTTTGTATAAAGGCCCT
GTAATAAGGAGATAG

Peptide Sequence

PEP ID

Os04t0151900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:3575397:3581555:-1 gene:Os04g0151900 transcript:Os04t0151900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0820C10.4 protein. (Os04t0151900-01)
Sequence

RFDNSDILNSTSKCKMPKIKSLSNACKVSFSPDGPISDEALERVRALLDEIRPIDVGLDN
EAQIARNWNNSTRQPNGRRGRNGANQFTSPIKYLHIHESESFSMGIFCMPPSSVIPLHNH
PGMTVLSKLLYGTLHAESYDWIDVTDPTDQLQELSVRPARLVRDREMSAPETTILYPNRG
GNIHTFRAITPCALFDVLSPPYSAEKGRDCSYFRKSSVRETPPVVLPGEINSAEVIWLEE
LEDHQPPEGFVVARGLYKGPVIRR

Transcript Sequence

Transcript ID

Os04t0151900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:3575397:3581555:-1 gene:Os04g0151900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0820C10.4 protein. (Os04t0151900-01)
Sequence

CTGCGCCTCCTCCTCGCCGCCGGTTCCGCCCCTCTCTCGCCTCGCCTCGGCCCTCCATCC
CCCCGCCTCCTCCGCGGGTCGCAGGGTGTCGCGCTTGGACGAAGGGCAGCTTTTCACAGC
ATGACTTAAAAGTGGAAATGAGTGCACATCCCAAAAACGATTGCTTGATTTGCAGTTCTT
GGAGCTGTGCACTACTATTTTGTCCAATTTCACTACATCTGCCTCTTGTTTGAGAGGTAT
TGCTGCTTCCACTTATGCCTTTGTTATAAGTTACAACCTGTGATGTGAAAAACAGCATAT
ACTTCAACATTTTTTTTAGATAATGGAAATGGATTACATCTCCGGCCTTTGCCAATGGGT
ACACAACCAAAAGGTCTTAGAAGTAAAAAGGAGAAATAAAATGAAAGAGGTGATGGGACA
AATCCCAATTCCTGCCAATGAAAAGATGAATTGAAATACTGTTTCCAAAATCACATATAT
TCTAGGCTTCTAGCACGAAATTTTATAGGTGCTACGCCATCCAAACTTCAACATATTTGC
ATATACTTCAACATATATATTTGTGCAATTAAATTCAAGGATTCACTTATACAGATGCTC
GTGGAGTCAATCTAAACTATTCTACTTCACCCTTGACCTTCTACTGTCATGTTAAATTTT
ATGAGTTACCTTTCAATATTCTCTTAGGTGGTTCTGCCAATAGTTTTCTGTATATAATTA
TTCATATTTACATTTTTTTAAGATAAATGGCTTTCGGCTAGCTTTTACTGAAAGCATACG
AGTTTGATACAAAAGAAAGAAAAAACAAAAGCTGGGGTTGCCAGCTTTTAACATATTAAA
TTGTTGGCATAATCATATTTACATCACAACTAAATTGTTGTGTTGATAATCTTGTCCTCT
TGTGTGCGTCCTATCCCCACACCACGACGCCGTGGACCATCAGCGGCTGCTCGCCATGCG
GACGAGGCTGACGGAGAGTGAAGAGGAGTGCCCTTGGAGCCTAGAAGGGTAGTATTAGTA
GAAGCCTAGGTAGGGTGAGGACTGGAATGAGGAGGAAGAAGAGGAGGCGAGGCAAATTAG
GGGTTCTCCAAATCGAGTCATTAGTAAGCCTTTTCTGCCGCTCAAATTTTATTTTATTTT
TTTCAATCGCATGATAGTGTACTAGGTGCTGCTGCATGTGAGCCCCACTGTGCTGGCGCA
GCCAAGTGCCATGGTACGGGTCAACACAACGCTCTTCTCATCACACGCGGGCCCCTCGGG
AGGAGGCTCCCATTCTCTCCTTGTGCTCGGTGCACGCGACGCTACTGAACTTATGAGGGG
GGTGCGCCCAATTCACCTGCCCTGGGCGACCGCGGCCTCATCGTTTGTCTGTCCTCGGTC
TCATTTCGTGGTGCGTATGTGAGGCGCTGGGTGTGTGGGTGGATCTGGGTCCAGTTTTAG
CTGTCTCATTGCTCCGATGCCAGTGGGGTGTTTGATGAAATGCCGATCGCGTCGCGGCGA
CCCCTGAGCGGGAGTTCTCGTCGGGGATGGGGATGGATTTGCCTGTTTGTGTTTAGTCGG
TATGCAGTCGCAGCGAGCGCGGTTTTCCGTGAATCTGCGCGGCCATGAATTTTAGGGCGT
GATTGGGTAGTCTGCTAGTTCATAGGTTTAAGAGGACCTTACTGGCTTTACCCTATGCAG
ACATCCCTTTAAACTGTGAATGCGGACCTTTTTTGAGATGGCTCGAAATTTAGTCATTCC
GTTGGATCTTGATGTCTAACTGATTACACATCAATGTGGTATACTCATTATCGTCATCCG
AATTTAATACGAGTTCAGCATTTGCTATACTACATTTTTCTAGATATGATGATTTTTCTT
CACCGCATATCGATTAAGCGATCTAAATCTTGTAAAATATGTTTTGTTACCCCAAGTTCT
CCTATACTTTTCACACAATTCTTTTTGTTTTTAGGGGTCTATTCATGTCTAATGTCATAA
GATACTTTGTTGCCTGTGTAGGTGCTAAAATTGACAGCCTGTGCTTTATCGCCACAACTG
TGGGGATCCGTTGAGCAATTATCACGTTCCAAATTCACTCAGTCTTTTGAAGGTTTGACA
ATTCCGATATTCTCAATAGCACATCGAAGTGCAAGATGCCAAAAATAAAGAGCCTGTCTA
ATGCTTGTAAAGTATCATTTTCTCCGGATGGGCCCATATCCGATGAAGCACTTGAGAGAG
TTCGTGCATTGTTAGATGAGATAAGACCTATAGATGTTGGCCTAGACAATGAAGCACAGA
TTGCTCGTAATTGGAATAATTCAACGCGTCAACCAAATGGAAGAAGAGGACGTAATGGGG
CTAACCAGTTCACATCTCCAATCAAATATTTACACATTCATGAAAGTGAAAGTTTCTCTA
TGGGTATATTTTGTATGCCGCCGTCATCAGTTATTCCACTTCACAATCACCCAGGAATGA
CAGTTCTGAGCAAGCTTCTCTATGGCACACTGCATGCTGAATCTTATGATTGGATTGATG
TAACTGATCCAACCGATCAATTACAGGAACTTTCAGTGAGACCAGCAAGGCTTGTCAGAG
ACCGTGAAATGTCTGCTCCAGAGACCACCATTCTTTATCCCAATAGAGGTGGTAACATCC
ACACTTTCAGAGCGATCACACCTTGTGCTCTCTTTGATGTCCTTTCTCCTCCTTATTCTG
CTGAGAAGGGGAGGGACTGTTCATACTTCCGGAAGTCTTCAGTAAGGGAAACACCACCTG
TTGTTTTGCCTGGTGAAATAAATAGCGCAGAAGTAATTTGGTTGGAGGAATTGGAGGACC
ATCAACCTCCAGAGGGCTTTGTTGTCGCGAGAGGTTTGTATAAAGGCCCTGTAATAAGGA
GATAGTTAGGTTCGAAGCACGTCTGTCCACGAATCACGAACCAGTTGACGATGCAGCTAG
GTTCCTAGCTAGTATCTGTGTCATGTGGGTTAGTATAGAGCAATGCATCGTTGAGTCACT
CATCTGCAACCTGCGATTTACTCTGTACATGTCAATGCAAAGTGATCTGGTGAAGATTTA
ACTGCCAGGTTACAAAACAAGAACGAAAAACTTTTATGGTTGACAGCCAGATGTTGTTCT
ATAACATAGTTGAGTGGCCCCCCCTATCAGCTGGAGGTTGTTACTTTTTTTTGTGTCGAC
TTGCAGAGCGCCTTGTCATGCTGTATTAGGTAACCTCAACGGCAGAACCTTTTCACCTAT
TGATGATTTCAGAAATTGAGTTGGTGTG