Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0141800-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:2863655:2865814:1 gene:Os04g0141800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147M20.4 protein. (Os04t0141800-00)
Sequence	GTCTCGTGCGTTACCCCGTTTTATTATTGCCGAATTCATGTTTCGACATGGGGGATACAA TTCTTTGTACTCCTCAGCCTCGCGCTGCAGGTCATTCTCCTCCTCCTGGCTGGTACTCGC CGGCGTAAAGTACTCGTGCCAAAGATCATCCTGTGGATAGCTTACCAGCTGGCCGACTCG ACGGCGATATACGCCCTTGGGAACCTCTCCTTCGGCAGCGTGGCAATTGAAGAGCACCGT CTGGCAGCATTTTGGGCACCATTCTTGTTGCTGCACCTCGGTGGCCCAGACAACATCACG GCCTATGCACTAGAGGACAACAAACTCTGGTTGCGCCACGCACTGAATCTTATTTTCCAG GTAATCGGAGCTTGCTATGTGGTCTACAAGCATATTATCGTTCGCAGGGAGGCCACAATC CTTAGAGTGGCCACCGGATTGATCTCCGCCGTGGGCGTTGTCAAGTATTGTGAGAGAACA TGGGCGCTCTATCGCAGCAATTTTAGCAGCATCGGGAGCTCTCTCGAGGAGTTACAGGGT AACCAACTCCATTGGTACCAAGGGTACCTACACAATGAGGATCATAACAACACTAACAAT GAATTCCTTCTGCAACGTGCTCACTCCCTGTTTCACATATGTAAGCGTGGGATAGTAGAC TCCGTGATCAATGAGGATACTGAGAATGCTGAGGCGGAAACCACCAAGGAAATAATCAAC AATCTTAGTGAAGAGCCCCAGCGGATGTATAAGGTAATGGAGATGGAACTGTCCCTGATG TACGATATTCTCTATACCAAGGCAGCCGTAGTCCACACTTGGATTGGCTACTGCATCCGA GCCTTGTCACCCTTTGCTATTGCCACCTCCTTTCTGCTGTTCTATTTCTGCGGCAGCGAG GTCAAGGATGGCCAGAATGGAGTCGACACCGCTGTTACCTATGTCCTGTTAGGCGGTGCC CTCTTGATGGAAACAACGTCCCTCCTCAGCGCTCTGGGGTCAAGCTGGACGCTTTCCTTC TTGTGCGCCAGGAGGTGGAGTTGGCTTCAACATGTCGCTCTATGTGTCGGAAGATGGTAC CAGCTCCGACGGGCAGTCCTGGCTGTTCGCAAGCGCGTCGCAGCCTTGACGGGAGGCCTT CTCGGTGGATCAAGAAACTGGTCGGGCACCATAGGACAGTTCAATTTGCTCTACTTCCGT GCCACGCAGGTCAACCCAACCAACAAGCAATTCGGTAGGCTCATTAAGAAGCTAGGGTAT GGTGACGAGTGGGACACCGGTTGTTATTTGTGGGACATCACAATTCCCGAGCTGGTGAAG CAGAAAGCATTGAGAATGGTCTCCAAGTATGATCTCAACACCATGGGCTTGCTCAGGCAT AATTGGGGTGAACTGGCACTGAAAAAGCATACTGAACCCTCAAAAAAAAATAAAAATTGT ACTGAACTGCTGGAAGAGCTAGAGAAATTGTGGGGTGACGACTTCCACGGGAGCATCATC ATCTGCCACATTGCCACAGACCTTATCCTCGCTGAGATAGAAAAGAACAAGGCCGGCGAA GACGACGCAGCACAACTCCAGTGTGTCGGCTCGATCAGGGCACTATCCAACTACTTGATG TTCCTCCTTGTGGCTCACCCGGATATGCTTCGAGGCCTTCCCCAAAAATGGTTGTACCAG CGGACCTGTGAGAACGTTGATCAAAACTGCAAAGAGCATCGTGAAGAACTCATTTCTTCT GGTGGAAAGGCTAATAATGTGATCTTTATGGTGCTCATGAAGCTGTTCGGTGGCCATAGT AATAGCTCAACATCTATTGGGCTCAGGCAGACGAATGCACTCGCTAAAATCCTATACAAG AGCCTGCCCAGCCAATTTGACCCCGCAATTCCTCGCCTTACTTATGCAAGGTTGGTTGCC AAGGAAATAATAAATTGGAAAGATGAAGATGGTCAATTGAAGAAGCCAGATGCAATATTG AAGGTGCTGCTTAACCTGTGGACAGATTTTCTCCTCTATGCTGCCAACAGGTGTAACAGG GAGTCTCATGCCAAGAAGCTCAACACTGGTGGTGAGTTTATTACTATTGTGTGGCTAATG GTTGAACACATATACAAAACAAAATCAAAAGGAAAAAAAGTTGTACCTGTCGGGCCATGA

Peptide Sequence

PEP ID	Os04t0141800-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:2863655:2865814:1 gene:Os04g0141800 transcript:Os04t0141800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147M20.4 protein. (Os04t0141800-00)
Sequence	VSCVTPFYYCRIHVSTWGIQFFVLLSLALQVILLLLAGTRRRKVLVPKIILWIAYQLADS TAIYALGNLSFGSVAIEEHRLAAFWAPFLLLHLGGPDNITAYALEDNKLWLRHALNLIFQ VIGACYVVYKHIIVRREATILRVATGLISAVGVVKYCERTWALYRSNFSSIGSSLEELQG NQLHWYQGYLHNEDHNNTNNEFLLQRAHSLFHICKRGIVDSVINEDTENAEAETTKEIIN NLSEEPQRMYKVMEMELSLMYDILYTKAAVVHTWIGYCIRALSPFAIATSFLLFYFCGSE VKDGQNGVDTAVTYVLLGGALLMETTSLLSALGSSWTLSFLCARRWSWLQHVALCVGRWY QLRRAVLAVRKRVAALTGGLLGGSRNWSGTIGQFNLLYFRATQVNPTNKQFGRLIKKLGY GDEWDTGCYLWDITIPELVKQKALRMVSKYDLNTMGLLRHNWGELALKKHTEPSKKNKNC TELLEELEKLWGDDFHGSIIICHIATDLILAEIEKNKAGEDDAAQLQCVGSIRALSNYLM FLLVAHPDMLRGLPQKWLYQRTCENVDQNCKEHREELISSGGKANNVIFMVLMKLFGGHS NSSTSIGLRQTNALAKILYKSLPSQFDPAIPRLTYARLVAKEIINWKDEDGQLKKPDAIL KVLLNLWTDFLLYAANRCNRESHAKKLNTGGEFITIVWLMVEHIYKTKSKGKKVVPVGP

Transcript Sequence

Transcript ID	Os04t0141800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:2863655:2865814:1 gene:Os04g0141800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147M20.4 protein. (Os04t0141800-00)
Sequence	GTCTCGTGCGTTACCCCGTTTTATTATTGCCGAATTCATGTTTCGACATGGGGGATACAA TTCTTTGTACTCCTCAGCCTCGCGCTGCAGGTCATTCTCCTCCTCCTGGCTGGTACTCGC CGGCGTAAAGTACTCGTGCCAAAGATCATCCTGTGGATAGCTTACCAGCTGGCCGACTCG ACGGCGATATACGCCCTTGGGAACCTCTCCTTCGGCAGCGTGGCAATTGAAGAGCACCGT CTGGCAGCATTTTGGGCACCATTCTTGTTGCTGCACCTCGGTGGCCCAGACAACATCACG GCCTATGCACTAGAGGACAACAAACTCTGGTTGCGCCACGCACTGAATCTTATTTTCCAG GTAATCGGAGCTTGCTATGTGGTCTACAAGCATATTATCGTTCGCAGGGAGGCCACAATC CTTAGAGTGGCCACCGGATTGATCTCCGCCGTGGGCGTTGTCAAGTATTGTGAGAGAACA TGGGCGCTCTATCGCAGCAATTTTAGCAGCATCGGGAGCTCTCTCGAGGAGTTACAGGGT AACCAACTCCATTGGTACCAAGGGTACCTACACAATGAGGATCATAACAACACTAACAAT GAATTCCTTCTGCAACGTGCTCACTCCCTGTTTCACATATGTAAGCGTGGGATAGTAGAC TCCGTGATCAATGAGGATACTGAGAATGCTGAGGCGGAAACCACCAAGGAAATAATCAAC AATCTTAGTGAAGAGCCCCAGCGGATGTATAAGGTAATGGAGATGGAACTGTCCCTGATG TACGATATTCTCTATACCAAGGCAGCCGTAGTCCACACTTGGATTGGCTACTGCATCCGA GCCTTGTCACCCTTTGCTATTGCCACCTCCTTTCTGCTGTTCTATTTCTGCGGCAGCGAG GTCAAGGATGGCCAGAATGGAGTCGACACCGCTGTTACCTATGTCCTGTTAGGCGGTGCC CTCTTGATGGAAACAACGTCCCTCCTCAGCGCTCTGGGGTCAAGCTGGACGCTTTCCTTC TTGTGCGCCAGGAGGTGGAGTTGGCTTCAACATGTCGCTCTATGTGTCGGAAGATGGTAC CAGCTCCGACGGGCAGTCCTGGCTGTTCGCAAGCGCGTCGCAGCCTTGACGGGAGGCCTT CTCGGTGGATCAAGAAACTGGTCGGGCACCATAGGACAGTTCAATTTGCTCTACTTCCGT GCCACGCAGGTCAACCCAACCAACAAGCAATTCGGTAGGCTCATTAAGAAGCTAGGGTAT GGTGACGAGTGGGACACCGGTTGTTATTTGTGGGACATCACAATTCCCGAGCTGGTGAAG CAGAAAGCATTGAGAATGGTCTCCAAGTATGATCTCAACACCATGGGCTTGCTCAGGCAT AATTGGGGTGAACTGGCACTGAAAAAGCATACTGAACCCTCAAAAAAAAATAAAAATTGT ACTGAACTGCTGGAAGAGCTAGAGAAATTGTGGGGTGACGACTTCCACGGGAGCATCATC ATCTGCCACATTGCCACAGACCTTATCCTCGCTGAGATAGAAAAGAACAAGGCCGGCGAA GACGACGCAGCACAACTCCAGTGTGTCGGCTCGATCAGGGCACTATCCAACTACTTGATG TTCCTCCTTGTGGCTCACCCGGATATGCTTCGAGGCCTTCCCCAAAAATGGTTGTACCAG CGGACCTGTGAGAACGTTGATCAAAACTGCAAAGAGCATCGTGAAGAACTCATTTCTTCT GGTGGAAAGGCTAATAATGTGATCTTTATGGTGCTCATGAAGCTGTTCGGTGGCCATAGT AATAGCTCAACATCTATTGGGCTCAGGCAGACGAATGCACTCGCTAAAATCCTATACAAG AGCCTGCCCAGCCAATTTGACCCCGCAATTCCTCGCCTTACTTATGCAAGGTTGGTTGCC AAGGAAATAATAAATTGGAAAGATGAAGATGGTCAATTGAAGAAGCCAGATGCAATATTG AAGGTGCTGCTTAACCTGTGGACAGATTTTCTCCTCTATGCTGCCAACAGGTGTAACAGG GAGTCTCATGCCAAGAAGCTCAACACTGGTGGTGAGTTTATTACTATTGTGTGGCTAATG GTTGAACACATATACAAAACAAAATCAAAAGGAAAAAAAGTTGTACCTGTCGGGCCATGA