Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0136900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:2441510:2447771:1 gene:Os04g0136900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147B06.6 protein. (Os04t0136900-01)
Sequence

ATGCCAGCTAGTGACAAGCAACTAGCATCCACAGTGAAGAAAGTAACATCGCGTGAGCTG
CCAAAGAAAGGTGCAGACATTGTAAATATGTCTCAGGGCACTTCACCGCTGCCAAAGGAT
AAAGGTACTGCGACAGAGCCTGGAAAGACCGTGGGCACCAAACGGTCTGATGCTCCTTCA
AGTCCTGGGTATCATAATGTTTATGTACGAAGAAAAGTGGAAAATGACCATAGTAAAGTG
AGTTCTTCTCAGGAGGTGAAGGGTAATGGAAGAGACAAAACAAAAGAGCAGGAGACACAG
CAAAATGTGCAACATGATCAGACCAATAAACCAGAAGTGTCATCTTCTGTTGCTGTGCAA
CATGATCAGTCCAATAAGCCAGATTTGTCATCTTCTGTTGCTGTGCAACATGATCAGACC
AATAAACCAGAATTGTCATCTTCTGTTGCTGTGCAACATGATCAGTCCAATAAGCCAGAT
TTGTCATCTTCTGTTGCTGTGCAACATGATCAGACCAATAAGCCAGAATGGCCATCTTCT
GTTGCTGTGCAACATGATCAGACCAATAAGCCAGAATTGCCATCTTCTGTTGCTGTGCAA
CATGATCAGACCAATAAGCCAGAATTGCCATCTTCTGTTGCTGTGCAACATGATCAGACC
AATAAGCCAGAATTGCCATCTTCTGTTGCTGAATCTGGAGGCATAGTGTCTCCTAAATCT
CCTGAAAAAACAAATGAACAAATTGTGAACAAGAAAAATGAGCCTCCTGTAGCTCCTGGT
ACTACCGTTCAAGATGATACCCATAAGTCAAGCAATCAATACTGGAATGCGAGATTTAAT
CGGTTACAGACATATTTGGAGAGCTGTGATCGGTCAACTCAGGAGGGTTATATGCGAATG
CTTAGGTCCCTCTCGGCGGCTGATCGAAGCATGCATGCAATTGATCTGGAGAAAAGGGCA
ATTCACTTATTAGTGGAGGAAGGGAAAGAGCTGCAACGGATGAAGGCTTTGAATGTTCTG
GGAAAAGTTTCGCCAAACGGTCCTTCAAAACAGGCCCCTTTGTAG

Peptide Sequence

PEP ID

Os04t0136900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:2441510:2447771:1 gene:Os04g0136900 transcript:Os04t0136900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147B06.6 protein. (Os04t0136900-01)
Sequence

MPASDKQLASTVKKVTSRELPKKGADIVNMSQGTSPLPKDKGTATEPGKTVGTKRSDAPS
SPGYHNVYVRRKVENDHSKVSSSQEVKGNGRDKTKEQETQQNVQHDQTNKPEVSSSVAVQ
HDQSNKPDLSSSVAVQHDQTNKPELSSSVAVQHDQSNKPDLSSSVAVQHDQTNKPEWPSS
VAVQHDQTNKPELPSSVAVQHDQTNKPELPSSVAVQHDQTNKPELPSSVAESGGIVSPKS
PEKTNEQIVNKKNEPPVAPGTTVQDDTHKSSNQYWNARFNRLQTYLESCDRSTQEGYMRM
LRSLSAADRSMHAIDLEKRAIHLLVEEGKELQRMKALNVLGKVSPNGPSKQAPL

Transcript Sequence

Transcript ID

Os04t0136900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:2441510:2447771:1 gene:Os04g0136900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147B06.6 protein. (Os04t0136900-01)
Sequence

AAATCCCCATTTTCTCTCCCTCCTCTCTTCTCTTCTCTTCTCTGCCTCTCGCCGCCCGCT
CGTCAGCCCGGCGTCCCCCTCCACCGCCGCCTCTCCACCATCTCCCCCTCCTCATCTACC
TCGTCCCGCCTCCCTGCCTCGCTCGCAGCACCGCCGGGTCGCTCCTCCTCCGCCCACCCC
ACCGTGGGCACCACCCCCGCGCCTCCACCGCCGATCTCAGGTTCCATTAACTTCGATTAT
ATAATGTAGAAAAGTGTAGCAGGAGCCAATAGCCATGCCAGCTAGTGACAAGCAACTAGC
ATCCACAGTGAAGAAAGTAACATCGCGTGAGCTGCCAAAGAAAGGTGCAGACATTGTAAA
TATGTCTCAGGGCACTTCACCGCTGCCAAAGGATAAAGGTACTGCGACAGAGCCTGGAAA
GACCGTGGGCACCAAACGGTCTGATGCTCCTTCAAGTCCTGGGTATCATAATGTTTATGT
ACGAAGAAAAGTGGAAAATGACCATAGTAAAGTGAGTTCTTCTCAGGAGGTGAAGGGTAA
TGGAAGAGACAAAACAAAAGAGCAGGAGACACAGCAAAATGTGCAACATGATCAGACCAA
TAAACCAGAAGTGTCATCTTCTGTTGCTGTGCAACATGATCAGTCCAATAAGCCAGATTT
GTCATCTTCTGTTGCTGTGCAACATGATCAGACCAATAAACCAGAATTGTCATCTTCTGT
TGCTGTGCAACATGATCAGTCCAATAAGCCAGATTTGTCATCTTCTGTTGCTGTGCAACA
TGATCAGACCAATAAGCCAGAATGGCCATCTTCTGTTGCTGTGCAACATGATCAGACCAA
TAAGCCAGAATTGCCATCTTCTGTTGCTGTGCAACATGATCAGACCAATAAGCCAGAATT
GCCATCTTCTGTTGCTGTGCAACATGATCAGACCAATAAGCCAGAATTGCCATCTTCTGT
TGCTGAATCTGGAGGCATAGTGTCTCCTAAATCTCCTGAAAAAACAAATGAACAAATTGT
GAACAAGAAAAATGAGCCTCCTGTAGCTCCTGGTACTACCGTTCAAGATGATACCCATAA
GTCAAGCAATCAATACTGGAATGCGAGATTTAATCGGTTACAGACATATTTGGAGAGCTG
TGATCGGTCAACTCAGGAGGGTTATATGCGAATGCTTAGGTCCCTCTCGGCGGCTGATCG
AAGCATGCATGCAATTGATCTGGAGAAAAGGGCAATTCACTTATTAGTGGAGGAAGGGAA
AGAGCTGCAACGGATGAAGGCTTTGAATGTTCTGGGAAAAGTTTCGCCAAACGGTCCTTC
AAAACAGGCCCCTTTGTAGCGACAGGACCAAGAACGAGATGGATGGTGTAATTCGAAGAG
CTGAAATGTTCCAGGTCCATCGCAGCAAAGACTATGGTCTACTCATGTAGCTCCATTTTT
CCTTGGGCCTCCTTTGCCATGTAACTCATTTTCCTTCATTTCTTTCTGCTTTTACCTCTC
GACGACTTACCAACCTCATGTGCTGTGAGATTGCTGTAATGTGGTGTAATTAACTTGTAT
GGATAAACCTGCCATGCTTAATGGCCAAGCGTGACAATTTCAATC