Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0132500-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:2034764:2038824:1 gene:Os04g0132500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 127 description:Protein kinase, core domain containing protein. (Os04t0132500-01);Leucine-rich repeat receptor-like kinase, Cold tolerance (Os04t0132500-02)
Sequence	ATGCAGCTGCCATTGCCACCATTGTTGCCAAGCCCCATGCACTTCCTTCTCCTCTTACTC CACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTG ACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCG CCGTGCAAGTGGTCGCACGTCGGCTGCGATGCCGCCACGGGGAGCGTCACCTCCGTCACG TTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCGCCGCGCTCCCGTCG CTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCAC CTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCG GCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCG GGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTC GACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCG CTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTC TCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCG CTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCC ATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCG CTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTA TGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTC TCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTC CCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCG CTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTC ATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAG CTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTC TCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACC AAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCG GCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCG GTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGC GTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACG CTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTG TCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGC CGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGC CGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAA CTCTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGG CCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAAC GCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTG TCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACG TCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGC ATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCAC CGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATG GTCGGGATCCTACGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGC GGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTC CAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATC GGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCC GTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGC GGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAG AACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGAC TACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGC GGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAG GGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCC AACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAG CTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTAC ATCGCCCCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTAC GGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGAC GGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCGCCGACGTGCTCGACCCG GCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCC CTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATG CTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCAAGTCC GGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGC ACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCC AAGGCCAAGTCGCCATTCGATTGA

Peptide Sequence

PEP ID	Os04t0132500-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:2034764:2038824:1 gene:Os04g0132500 transcript:Os04t0132500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 127 description:Protein kinase, core domain containing protein. (Os04t0132500-01);Leucine-rich repeat receptor-like kinase, Cold tolerance (Os04t0132500-02)
Sequence	MQLPLPPLLPSPMHFLLLLLHLLSFSSSTAASASSEVAFLTQWLNTTAARPPDWSPSASS PCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICAALPSLASLVVSDANLTGGVPDDLH LCRRLAVLDLSGNSLSGPIPASLGNATAMASLALNSNQLSGPIPASLGNLAASLRDLLLF DNRLSGELPASLGELRLLESLRAGGNRDLGGEIPESFSRLSNLVVLGLADTKISGALPAS LGRLQSLQTLSIYTTMLSGSIPAELAGCGNLTNVYLYENSLSGPLPPSLGALPRLQKLLL WQNSLTGPIPDTFGNLTSLVSLDLSINAISGAIPASLGRLPALQDLMLSDNNLTGTIPPA LANATSLVQLQLDTNAISGLIPPELGRLAALQVVFAWQNQLEGSIPASLAGLANLQALDL SHNHLTGAIPPGIFLLRNLTKLLLLSNDLSGVIPPEIGKAASLVRLRLGGNRLAGTIPAA VAGMRSINFLDLGSNRLAGGVPAELGNCSQLQMLDLSNNTLTGALPESLAGVRGLQEIDV SHNQLTGGVPDAFGRLEALSRLVLSGNSLSGAIPAALGKCRNLELLDLSDNALSGRIPDE LCAIDGLDIALNLSRNGLTGPIPARISALSKLSVLDLSYNALDGGLAPLAGLDNLVTLNV SNNNFTGYLPDTKLFRQLSTSCLAGNSGLCTKGGDVCFVSIDASGRPVMSADEEEVQRMH RLKLAIALLVTATVAMVLGMVGILRARGMGIVGGKGGHGGGSSDSESGGDLAWPWQFTPF QKLSFSVEQVVRNLVDANIIGKGCSGVVYRVGLDTGEVIAVKKLWPSTRNGADKDDVAGG GRVRDSFSAEVRTLGCIRHKNIVRFLGCCWNKTTRLLMYDYMANGSLGAVLHERRHGGHG GGGAQLEWDVRYRIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEAYIADFGLAK LVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPD GQHVVDWVRRRKGAADVLDPALRGRSDAEVDEMLQVMGVALLCVAPSPDDRPAMKDVAAM LNEIRLDRDDYANVDLLLKSGAAAASPPRAAAAATSTSSSTPPSSSSFSGSSAMIYNSSS KAKSPFD

Transcript Sequence

Transcript ID	Os04t0132500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:2034764:2038824:1 gene:Os04g0132500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 127 description:Protein kinase, core domain containing protein. (Os04t0132500-01);Leucine-rich repeat receptor-like kinase, Cold tolerance (Os04t0132500-02)
Sequence	AGCATAGTGTATTGTGCACTGCCCCAAGCAAGCACAGCACGATTTTTGATGCAGCTGCCA TTGCCACCATTGTTGCCAAGCCCCATGCACTTCCTTCTCCTCTTACTCCACCTCCTCTCC TTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTC AACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGG TCGCACGTCGGCTGCGATGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTG CACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCGCCGCGCTCCCGTCGCTCGCGTCGCTC GTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGC CTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGG AACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCG GCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTC TCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGC GGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTC GTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTC CAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAG CTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCG CTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCG CTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTC TCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAG GACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCG ACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAG CTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCC ATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCAC CTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTC CTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTG CGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATG AGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAG CTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCG CTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAG CTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTC AGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAG CTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTCTGCGCCATT GATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCG AGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGC GGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAAC TTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCC GGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGC GGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTC GCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTA CGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGAC TCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGC TTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGC TCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTC TGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGC GACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGG TTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAAC GGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCG CAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTAC CTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTC ATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGAC GGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGAG TACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTG CTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTC GTCGACTGGGTCCGCCGCCGGAAGGGCGCCGCCGACGTGCTCGACCCGGCGCTGCGCGGC CGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTC GCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATC CGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCAAGTCCGGCGCCGCCGCC GCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGC AGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCG CCATTCGATTGAAACCACCATATAACTCTGAACAGAAAACATAAGAAAAATGTTTGTGCC TTCTTGGGCTTGTTTGATGATCTTACATGTGTTTGTGGTGGAGAATTTGATGCGAGTTTG TTGTGAATTTGTGATGGTAGGTGGTGAGCTGTGTAAATGAATGGGGGGAAGAGGAGGAGA AGGATAGGCTGTTTGAATTCGTTTCTTTTTGTTTTGTTTTTGGAGAGTAGAAGTAGATGG AGCTGAGGAATTAGGAAGAACTAGAACCTGCAGAAGCAAAAAGCTTGATGGCTTTGTTTT GTTAGTGTTCAGTGTATGCCTGTTGAATAAAGATCCAAGATTACCTTACATTCCT