Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0129200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:1837130:1839583:-1 gene:Os04g0129200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0131J24.2 protein. (Os04t0129200-00)
Sequence

ATGAACTCCGGCGAGCCTCCTGCCTCGTCCTCCCTCGGCAATGCCGGAGAGGAGGAGGAG
GAGGACGACTTCTACTGGGACGCCGAGGCGGAGGCCGAGCTGCAGGCCATCGAGGCCGCC
TACGCCGCCGCCAAGCGCCGCCGCCTCCCCGACTGGCCAAGCCCCAACCCGGTCACCGCA
TCCGCATCCGCATCCGCATCCGGGGGTTGTTCCCCCGCGCCGCCATGGGCTCCCTCTCCT
CCCGCTTTCCGAGGTAATGTGAAGGCAAGGTACCAACCAGTAATGTTCAATGGCAGCATA
GTGTACTGCAGGACCCCTTCAGAAGTGGAGAAAGCCACAAGGGACATTTTATGCAAAATT
GAAACCATGAAGGCCTCTGGCCAGGTTTCTCTTGGATTCGATCTCGAGTGGAGGCCCTTT
CCGAGAAGAGGAGATCCACCATGTAAAGTTGCTGTAATGCAGTTATGCATGGAGAGAACT
CGTTGTTATGTCATGCACATCATTCACTCCGGAGTGCCACCTGTACTAAAGTCTCTTTTG
GAGGATAGTTCGTCCGTTAAAGTTGGAATATGTATAGATAATGACGCAAGGAAAATGTTC
AATGACTATGATGTCCATGTACAGCCATTGATGGATCTGTCAAATCTTGCTAATGCCAAG
TTAGGTTTCCCTCCTAAAAGATGGAGTCTTGCTTCATTAACTGAAATGGTCACATGTAGA
GAGTTGCCGAAGCCAAGCAACATAAGAATGGGAAACTGGGAGGCATATGTTCTCTCAAAG
CAACAACTTCAGTATGCTGCTACAGATGCCTACATATCTTGGCACTTGTATGAGGTACTG
CAGAGTCTCCCAGACAATAATGTTGAGGTTGAAAAGGAGACAATTACAGCAGCATAG

Peptide Sequence

PEP ID

Os04t0129200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:1837130:1839583:-1 gene:Os04g0129200 transcript:Os04t0129200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0131J24.2 protein. (Os04t0129200-00)
Sequence

MNSGEPPASSSLGNAGEEEEEDDFYWDAEAEAELQAIEAAYAAAKRRRLPDWPSPNPVTA
SASASASGGCSPAPPWAPSPPAFRGNVKARYQPVMFNGSIVYCRTPSEVEKATRDILCKI
ETMKASGQVSLGFDLEWRPFPRRGDPPCKVAVMQLCMERTRCYVMHIIHSGVPPVLKSLL
EDSSSVKVGICIDNDARKMFNDYDVHVQPLMDLSNLANAKLGFPPKRWSLASLTEMVTCR
ELPKPSNIRMGNWEAYVLSKQQLQYAATDAYISWHLYEVLQSLPDNNVEVEKETITAA

Transcript Sequence

Transcript ID

Os04t0129200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:1837130:1839583:-1 gene:Os04g0129200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0131J24.2 protein. (Os04t0129200-00)
Sequence

AGGAAAAAAAAATTCCTCCTTTTCCCCGTCTTCCCATCGCTCGCCGGCGACCGCCATGAA
CTCCGGCGAGCCTCCTGCCTCGTCCTCCCTCGGCAATGCCGGAGAGGAGGAGGAGGAGGA
CGACTTCTACTGGGACGCCGAGGCGGAGGCCGAGCTGCAGGCCATCGAGGCCGCCTACGC
CGCCGCCAAGCGCCGCCGCCTCCCCGACTGGCCAAGCCCCAACCCGGTCACCGCATCCGC
ATCCGCATCCGCATCCGGGGGTTGTTCCCCCGCGCCGCCATGGGCTCCCTCTCCTCCCGC
TTTCCGAGGTAATGTGAAGGCAAGGTACCAACCAGTAATGTTCAATGGCAGCATAGTGTA
CTGCAGGACCCCTTCAGAAGTGGAGAAAGCCACAAGGGACATTTTATGCAAAATTGAAAC
CATGAAGGCCTCTGGCCAGGTTTCTCTTGGATTCGATCTCGAGTGGAGGCCCTTTCCGAG
AAGAGGAGATCCACCATGTAAAGTTGCTGTAATGCAGTTATGCATGGAGAGAACTCGTTG
TTATGTCATGCACATCATTCACTCCGGAGTGCCACCTGTACTAAAGTCTCTTTTGGAGGA
TAGTTCGTCCGTTAAAGTTGGAATATGTATAGATAATGACGCAAGGAAAATGTTCAATGA
CTATGATGTCCATGTACAGCCATTGATGGATCTGTCAAATCTTGCTAATGCCAAGTTAGG
TTTCCCTCCTAAAAGATGGAGTCTTGCTTCATTAACTGAAATGGTCACATGTAGAGAGTT
GCCGAAGCCAAGCAACATAAGAATGGGAAACTGGGAGGCATATGTTCTCTCAAAGCAACA
ACTTCAGTATGCTGCTACAGATGCCTACATATCTTGGCACTTGTATGAGGTACTGCAGAG
TCTCCCAGACAATAATGTTGAGGTTGAAAAGGAGACAATTACAGCAGCATAGATGCAAAT
GCATAAACTGAAAAGTGGGTTGTTAATCTATTTGATTGCTCCCTAATGTTCTGCATCTTC
ACTTCTCAACCAGGTTG