Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0128900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1813960:1816070:-1 gene:Os04g0128900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 7 description:Flavin monooxygenase-like enzyme, Auxin biosynthesis (Os04t0128900-01)
Sequence	ATGGTGCTCCAACACAGTGATCGCATGGACAGCCTCTTCTCCCCACAGACGAGCTGGGTG AGCGGCCCGATCATCGTGGGCGCCGGGCCGTCGGGGCTCGCCGTGGCGGCGAGCCTGCGG GAGCAGGGCGTGCCGTTCACCATGCTGGAGCGCGCCGACTGCATCGCGTCGCTGTGGCAG AAGCGCACCTACGACCGCCTCAAGCTCCACCTCCCCAAGCAGTTCTGCGAGCTCCCGCGC ATGGCGTTCCCGGCGCACTACCCGGAGTACCCGACGCGCCGCCAGTTCATCGACTACCTC GAGGACTACGCCGCCGCGTTCGACATCAACCCGCTCTTCGGCCACACCGTGCTCTCCGCG CGCTACGACGAGACGTCCGGCCTGTGGCGCGTGCGCGCCTCCTCGTCCGCCGGCGCCGAG ATGGAGTACATTGGCAGCTGGCTCGTCGTCGCCACCGGCGAGAACGCCGAGAGCGTCGTC CCGGACATCCCCGGGATCGATGGGTTCGGCGGCGAGGTGGTGCACGTCGCCGACTACAAG TCCGGCGAGGCGTACCGCGGCAAGAGGGTGCTCGTCGTCGGGTGCGGCAACTCCGGTATG GAGGTGTCGCTGGACCTGTGCGACCACGGCGCACGCCCGGCGATGGTGGTGCGCGACGCC GTCCACGTCCTCCCCCGGGAGGTGCTCGGCAAGTCCACGTTCGAGCTCGCCGTGCTGCTC ATGGCGTGGCTCCCGCTCTGGCTCGTCGACAAGATCCTCGTCCTCCTCGCCTGGCTCGTC CTCGGCAACCTCGCCAAGCTCGGCATCCGCCGCCCCGCCACCGGCCCGCTCGAGCTCAAG AACACCACCGGCCGCACCCCGGTGCTCGACTACGGCGCCCTCGCCAGGATCCGCTCCGGC GAGATCACCGTCGTCCCCGGCGTCGCCCGCTTCGGCAGGGGCTTCGCCGAGCTCGCCGAC GGCCGCGTCATCGCCCTCGACGCCGTCGTCCTCGCCACCGGCTACCGCAGCAATGTGCCC CAATGGCTCCAGGGAAATGACTTCTTCAACAAGGACGGGTACCCAAAGACGGCGTTCCCC AACGGATGGAAGGGTGAGTCGGGGCTGTACGCCGTCGGCTTCACCCGGCGCGGCCTCTCC GGCGCCTCCGCCGACGCCATGCGCGCCGCCAAGGACCTTGCCAGGGTGTGGAAGGAGGCG ACGAAGCCAACCAAGAAGAGCACGGCGTGCCACCGGAGGTGCATCTCCGTCATCTTCTAA

Peptide Sequence

PEP ID	Os04t0128900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1813960:1816070:-1 gene:Os04g0128900 transcript:Os04t0128900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 7 description:Flavin monooxygenase-like enzyme, Auxin biosynthesis (Os04t0128900-01)
Sequence	MVLQHSDRMDSLFSPQTSWVSGPIIVGAGPSGLAVAASLREQGVPFTMLERADCIASLWQ KRTYDRLKLHLPKQFCELPRMAFPAHYPEYPTRRQFIDYLEDYAAAFDINPLFGHTVLSA RYDETSGLWRVRASSSAGAEMEYIGSWLVVATGENAESVVPDIPGIDGFGGEVVHVADYK SGEAYRGKRVLVVGCGNSGMEVSLDLCDHGARPAMVVRDAVHVLPREVLGKSTFELAVLL MAWLPLWLVDKILVLLAWLVLGNLAKLGIRRPATGPLELKNTTGRTPVLDYGALARIRSG EITVVPGVARFGRGFAELADGRVIALDAVVLATGYRSNVPQWLQGNDFFNKDGYPKTAFP NGWKGESGLYAVGFTRRGLSGASADAMRAAKDLARVWKEATKPTKKSTACHRRCISVIF

Transcript Sequence

Transcript ID	Os04t0128900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1813960:1816070:-1 gene:Os04g0128900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 7 description:Flavin monooxygenase-like enzyme, Auxin biosynthesis (Os04t0128900-01)
Sequence	AACACAAATCACTTGCAAAACCAACACAAACACAACACAAGCAACACACACAAGCTTCTC CTTCCAAAATACTCCTCAACTAGCTAAGTCTAAGCTTCATCGATCCAAGCAAGCTAAGCC ATGGTGCTCCAACACAGTGATCGCATGGACAGCCTCTTCTCCCCACAGACGAGCTGGGTG AGCGGCCCGATCATCGTGGGCGCCGGGCCGTCGGGGCTCGCCGTGGCGGCGAGCCTGCGG GAGCAGGGCGTGCCGTTCACCATGCTGGAGCGCGCCGACTGCATCGCGTCGCTGTGGCAG AAGCGCACCTACGACCGCCTCAAGCTCCACCTCCCCAAGCAGTTCTGCGAGCTCCCGCGC ATGGCGTTCCCGGCGCACTACCCGGAGTACCCGACGCGCCGCCAGTTCATCGACTACCTC GAGGACTACGCCGCCGCGTTCGACATCAACCCGCTCTTCGGCCACACCGTGCTCTCCGCG CGCTACGACGAGACGTCCGGCCTGTGGCGCGTGCGCGCCTCCTCGTCCGCCGGCGCCGAG ATGGAGTACATTGGCAGCTGGCTCGTCGTCGCCACCGGCGAGAACGCCGAGAGCGTCGTC CCGGACATCCCCGGGATCGATGGGTTCGGCGGCGAGGTGGTGCACGTCGCCGACTACAAG TCCGGCGAGGCGTACCGCGGCAAGAGGGTGCTCGTCGTCGGGTGCGGCAACTCCGGTATG GAGGTGTCGCTGGACCTGTGCGACCACGGCGCACGCCCGGCGATGGTGGTGCGCGACGCC GTCCACGTCCTCCCCCGGGAGGTGCTCGGCAAGTCCACGTTCGAGCTCGCCGTGCTGCTC ATGGCGTGGCTCCCGCTCTGGCTCGTCGACAAGATCCTCGTCCTCCTCGCCTGGCTCGTC CTCGGCAACCTCGCCAAGCTCGGCATCCGCCGCCCCGCCACCGGCCCGCTCGAGCTCAAG AACACCACCGGCCGCACCCCGGTGCTCGACTACGGCGCCCTCGCCAGGATCCGCTCCGGC GAGATCACCGTCGTCCCCGGCGTCGCCCGCTTCGGCAGGGGCTTCGCCGAGCTCGCCGAC GGCCGCGTCATCGCCCTCGACGCCGTCGTCCTCGCCACCGGCTACCGCAGCAATGTGCCC CAATGGCTCCAGGGAAATGACTTCTTCAACAAGGACGGGTACCCAAAGACGGCGTTCCCC AACGGATGGAAGGGTGAGTCGGGGCTGTACGCCGTCGGCTTCACCCGGCGCGGCCTCTCC GGCGCCTCCGCCGACGCCATGCGCGCCGCCAAGGACCTTGCCAGGGTGTGGAAGGAGGCG ACGAAGCCAACCAAGAAGAGCACGGCGTGCCACCGGAGGTGCATCTCCGTCATCTTCTAA GCCGCCGCCGGCCACCGTTGCTACTGCTACTCGATCCATCAATCCCCTTGGTTAAATTCG TTGTTGATTAAGATTGGTTCTTTCTTTCTTTCTTGAAGAATTAAATTAAATTAAGCTAGG AGAGTGTGATCATACTACGTTGCTAGGTTAGTGATATTGTAGGACACAGCAGTGAGAGTG GGAGAGTATAAAAAAAAATAAGGTTAATTATTTGAGAGTTGAAAAAAAAAGAAAGAAAAA GAGAGACAAGGTGGAGCCCTCTCGTCAGTGGGAAGTGAGAGCCCTAGGGGATTTTTACTG CAGCTAGAGGCGTCTGGTGTACAGAAGAAGTGAGCTTGCCAGTTGATGGAAGATGAGGCT CTTGTCATTGACCTATTGTTTCTTTTGTTCTATATATGTATGTATAATCTTATATAATAT CCCCTACTAGTAGTATGTAGTGGCCTTAATTAATCTGATGATGATGATTAGTAGTAGTAG TAGTAGTAAGCACCTCTTAGTTTAGTTGTTACTGCCTCTCCAGTGACAGTTCTTTTGTAA TCTTTGCAATCACCTTTTGTAACTCCCTTTGTATAACAACTCTTTACTTGAGAGTTGAGA GTGAATATATATATAACTAGTGTAATGTTTTGCTTG