Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0128001-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:1766911:1768449:-1 gene:Os04g0128001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126J24.7 protein. (Os04t0128001-00)
Sequence

ATGATGCTGCTTCTTACTCTCCTCCTCGTCCTTACTCTCTTCTTATGCCTCGCCGTCTTC
CGGCGAACGACTAGCCGTGCCCGCCGTGCTCCGGTATCCCTTCGGCAGCCAACCGTTGAG
ATCCACGACGGCGACGTCGCCCGCCGCGCACTCCTCGACCACGCCGACGCATTCGTCAAC
CGCCCGGCCATCGGCGCGGAGCCCCGCGGCCGCCGGAGCGACAATCTCACCACCGTGCGC
TACGGCCCGCAGTGGCGCGTGCTCTGGCGCAACCTCACCGCCGGATTCCTCCGCCCGTCG
CGCGTCGGCCTCCTCGCGCCGCTGCAGCAGAAGGCCGTCGACGCCCTCGTCGCCGACATC
GCCGCCCGTGGTGCCGACGGCGGCGAGGTGGGCGTCCGCGACGTCGTCCACGACGCCTTG
TTCCCGCTGGCCGTGCGCTTCTGCTTCGGCGACGACATCGACGAGCGCCATGTGCGCGAC
CTACGGCGCGTGATGCAGGAGTTGAAGCTCGACGTCGTGGTCAAGGGCTTCAGTGGCTCG
ATGCTGGCGAACCTCGTGCACTGGTGGCGGCTGCGCCGCTTCATCGCATCCGGCCGCCGG
CGGGCCGAGATTTTCCTCCCACTCATCGCCCAACGGCGGCGAACACAGCATCGCGACGCC
GACGGCGGCGTGTTCCGTCCTTACGTCGACTCGCTGCTCGACCTGCGCGTCCCTGTCGGA
CACGACGCCGACGCCGACGCCGCCGGCTGCGAGGACAACGAAGGGCGCAACTCCGGCCGT
GCACTCACCGACGACGAGATGGTGGGCCTCGTGGCGGAGTTCCTCAGCGGCGGCACGGAG
ACTGTCGTGTCGTGCGTCGAGTGGACCCTCGCGCACCTCGTCATCGAGCCGGAAATCCAG
GACAAGCTGTGCCGCCAGGTCGTCGCCGCCGCCGACCACCACGGCGGCGAGCGCGGCACC
ACGCCGGCGTACCTCCGCGCCGTGATCCTCGAGAGCCTCCGCATGCACCCGCCGGTGCCG
CTGACCATGCGCGACGTCCGCTCGCCGCAGGCGGTCGAACACCTTTCCCTGCCGGACGGC
GGCGCGCGGGTGCACTTCATCCTCGGGGACATTGGGCGGGACGGCAAGGCGTGGACGGAT
CCCGACGAGTTCCGGCCGGAGAGGTTCATGGCCGGCGGCGAGGCGGAGGGGGTGGGCCCG
CTGCCGGGGCCGAGGGAGGTGAGGATGATGCCGTTCGGCGCGGGGCGGAGGTATTGCCCC
GGCATGGGGCTCGGGGTGGCGCACGCCTGCCTCTTGGTGGCGGCGCTGGTGCGCGAGTTT
GAGTGGGCTCCGACGGCGGTGGCGGCGACCGGCGGTGTGGACTTGACGGAGGTGAACGGC
TTCTTCAAGATGATGCGGACGCCGCTCCGGGCGCGCGCTACGCCGCGAGGCACGTCCGCG
TGA

Peptide Sequence

PEP ID

Os04t0128001-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:1766911:1768449:-1 gene:Os04g0128001 transcript:Os04t0128001-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126J24.7 protein. (Os04t0128001-00)
Sequence

MMLLLTLLLVLTLFLCLAVFRRTTSRARRAPVSLRQPTVEIHDGDVARRALLDHADAFVN
RPAIGAEPRGRRSDNLTTVRYGPQWRVLWRNLTAGFLRPSRVGLLAPLQQKAVDALVADI
AARGADGGEVGVRDVVHDALFPLAVRFCFGDDIDERHVRDLRRVMQELKLDVVVKGFSGS
MLANLVHWWRLRRFIASGRRRAEIFLPLIAQRRRTQHRDADGGVFRPYVDSLLDLRVPVG
HDADADAAGCEDNEGRNSGRALTDDEMVGLVAEFLSGGTETVVSCVEWTLAHLVIEPEIQ
DKLCRQVVAAADHHGGERGTTPAYLRAVILESLRMHPPVPLTMRDVRSPQAVEHLSLPDG
GARVHFILGDIGRDGKAWTDPDEFRPERFMAGGEAEGVGPLPGPREVRMMPFGAGRRYCP
GMGLGVAHACLLVAALVREFEWAPTAVAATGGVDLTEVNGFFKMMRTPLRARATPRGTSA

Transcript Sequence

Transcript ID

Os04t0128001-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:1766911:1768449:-1 gene:Os04g0128001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126J24.7 protein. (Os04t0128001-00)
Sequence

ATGATGCTGCTTCTTACTCTCCTCCTCGTCCTTACTCTCTTCTTATGCCTCGCCGTCTTC
CGGCGAACGACTAGCCGTGCCCGCCGTGCTCCGGTATCCCTTCGGCAGCCAACCGTTGAG
ATCCACGACGGCGACGTCGCCCGCCGCGCACTCCTCGACCACGCCGACGCATTCGTCAAC
CGCCCGGCCATCGGCGCGGAGCCCCGCGGCCGCCGGAGCGACAATCTCACCACCGTGCGC
TACGGCCCGCAGTGGCGCGTGCTCTGGCGCAACCTCACCGCCGGATTCCTCCGCCCGTCG
CGCGTCGGCCTCCTCGCGCCGCTGCAGCAGAAGGCCGTCGACGCCCTCGTCGCCGACATC
GCCGCCCGTGGTGCCGACGGCGGCGAGGTGGGCGTCCGCGACGTCGTCCACGACGCCTTG
TTCCCGCTGGCCGTGCGCTTCTGCTTCGGCGACGACATCGACGAGCGCCATGTGCGCGAC
CTACGGCGCGTGATGCAGGAGTTGAAGCTCGACGTCGTGGTCAAGGGCTTCAGTGGCTCG
ATGCTGGCGAACCTCGTGCACTGGTGGCGGCTGCGCCGCTTCATCGCATCCGGCCGCCGG
CGGGCCGAGATTTTCCTCCCACTCATCGCCCAACGGCGGCGAACACAGCATCGCGACGCC
GACGGCGGCGTGTTCCGTCCTTACGTCGACTCGCTGCTCGACCTGCGCGTCCCTGTCGGA
CACGACGCCGACGCCGACGCCGCCGGCTGCGAGGACAACGAAGGGCGCAACTCCGGCCGT
GCACTCACCGACGACGAGATGGTGGGCCTCGTGGCGGAGTTCCTCAGCGGCGGCACGGAG
ACTGTCGTGTCGTGCGTCGAGTGGACCCTCGCGCACCTCGTCATCGAGCCGGAAATCCAG
GACAAGCTGTGCCGCCAGGTCGTCGCCGCCGCCGACCACCACGGCGGCGAGCGCGGCACC
ACGCCGGCGTACCTCCGCGCCGTGATCCTCGAGAGCCTCCGCATGCACCCGCCGGTGCCG
CTGACCATGCGCGACGTCCGCTCGCCGCAGGCGGTCGAACACCTTTCCCTGCCGGACGGC
GGCGCGCGGGTGCACTTCATCCTCGGGGACATTGGGCGGGACGGCAAGGCGTGGACGGAT
CCCGACGAGTTCCGGCCGGAGAGGTTCATGGCCGGCGGCGAGGCGGAGGGGGTGGGCCCG
CTGCCGGGGCCGAGGGAGGTGAGGATGATGCCGTTCGGCGCGGGGCGGAGGTATTGCCCC
GGCATGGGGCTCGGGGTGGCGCACGCCTGCCTCTTGGTGGCGGCGCTGGTGCGCGAGTTT
GAGTGGGCTCCGACGGCGGTGGCGGCGACCGGCGGTGTGGACTTGACGGAGGTGAACGGC
TTCTTCAAGATGATGCGGACGCCGCTCCGGGCGCGCGCTACGCCGCGAGGCACGTCCGCG
TGACACACTGCGGCATCTATGTACGTGATGCTCAATCATATATACTAGTATACTCTATGG
ACTATGTACGTGAGTACGTCTAATAATTGCGTACATACA