Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0127800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1754439:1759735:1 gene:Os04g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 3, Mediator 15_1 description:Coactivator CBP, KIX domain containing protein. (Os04t0127800-01)
Sequence	ATGGAGCGCGCCACCGCTGCACACCCCGCCTCCTCCTCCGTCTCCGCCGCCCACTGGATG GCGACGGAGGATCTCGGCCTCCGCCGCAACATCATCAACAACATGGTGAAGAAATTTATG ACCATTACCAATTCTCAGCAAGATCATCATTACCGGGAGATCCAAAATTATGCTATCAGA TGTGAACAGGACGCGCTTAACAAGACCACCAATAAGGAAGATTATTTGAGATGCATAGCT CAAAGAATCATGAATATGGAGATGAAAGTAAGACGATCACAATCACTGCAGGCAGGGACG ACACCTAGCACACAGAGGCCATCTTCCCAGCAACAAAATGTATGTACCACACCACAAAAT CCAGGCCAAGTGCCAGACCAGCACAGGGCTTCTGCACCAAATTCACAGATCGAAGCTAGC CAAGAACAGACTGTGATGGTGGCAGCTCCGGATTGTTACCTCAACTTCAATACCACAGCA ATTAGTCCAGTGGCAATGTGTGTCCATCCTAGCCAGCAACCTCAGAGTCAACAACACCAA CAACAGGCCAAGCAACTACACCCCACAAACGTTGTCGGATACAACCCAACTAGCTTGAAT CAGATTCAAGGACAATCAGTTAGTGGACAAAATTTTCAGCAGAATCATGTACTAGGGCAG AATGCCAGTGGCAGTGGTACACAACAGAGGCAACTAGTTGAGACACCGGAGCAGCACCAG CTGTTGAGGATGAAGCAGCAACATATGAGGGGAAACCAGCAGCAGAATTTCACCCAGAGA AACCAAATTCTTCCAGCACAGCAGGCCCATCTTGGCAAGATGCAGATTGGTCATCCTGCA GTACAGAACAATCAGCAGAATGTTGGAATGTCATGTCAGCATATGACTCCGCCTCAATGT CAAGTTGCCACAGCTCAACAAAGCAGTCTTGGTTGTGATAGCCCTCAAACTTTAGAACCG ATCGTAATTGCCGGAGAAGTGGATTGGAGGGAAGAAATATTTCAGAAGATCAAGTCATTC AAGGATGCATACCTTTCCGAAGTTTTGGAATATGATCAAATCGTTCATGTTCCGAAGTTA ACAGAGGAGCAACTCCGTTCATTACCTGTTGAGAATGCTGAGAAATTGAGGCGTATAAGA CATGTCAAGAAAATTATCGCAATAATGCTAGACTTGTTGAATACCCAGAAAAGCAACGTG CGCAAGGGTATGCAGAATATATTCCCCATATTCCAGCAGTACCTGGGGCAATTGCGACTT TCCATATCAAAAAGTAAAGCTCGGAAGACAGTGGCAAAAATAGGGTGTCAGTCGCAGAAT TGCAGTGAGAATTCTCATATCGTCAATCTTGGTAGCAATACAGCCCCATTCACTTGTGAT GCAAGACAGCAAAAACAGCAAGAGCAAGTTATCAGTGCTAAAACTTCCAGGATGGAGCAA GCAATCATGACCCGAACTCCCACACCTCAACAAGAAAGTCATGGCTGCCACCTACTAGGA GTACCAAGCTCTTGTTTCTCACCAAAAGCACTGCAACCTTCCTCAACCAATACTATTGAG GAGTGCTTCACCCCATCCCCGGTAACCCAGACAGTTCAACCAATTCAAGTAGCTTCACCC CATGTTACTTCACCCAGTGCTTATGGAAAATCATCTGTTCCAAAGCCTAGTGTTGCACGA GTTGTTTCACACTCTGCTTCGATAAAGTCAAGATTGGCATCATCCCCTAGCAGGCCAGAA GGTGCGCATGCTGCCTCGCCCAATATTACTTCAGTTGAATCCACATTGCCAACTCCTATT GCCAAGCCAGGGACTGTACGAGCTGCCTCACCTTGCACTCCAGTCAAATCCACATCGCAA TCGCAGCTTAGCAAGCCAGCAGTTACAGAAGTTGATTCATGCCGTGCTTGTGTGACATCT AAACTGAAATCTCCTGTTGGCAAGCCAGAGACTGCAGGAGCTGCTTCACCATGTGCTTCT GTGAAGTCCACAGTGTCACTGGACGTTGACAGTGTTACTGAATTCTTGCAGCACCGTGTT GTAGCACCTACAGTAGCAAATGGTGGTTCTTCTAACCAGGCAATTCATACTCTGGTATCA GCAGCGCCACCTAAAGCTGCTCATCAAGCAGATGATCAGGTGCAAAACGGAGCTGAAGAA ATGGAAGCCAAAAAGCCCTTCAGCCGCCTAATTGAAACACTCCTGTCTTCATCACCGGAA GCACTCCTCCACTCATCTAATTCCATGAGATTGGCTATCTGGGAGGCTGACCGAATACCA GCACCATCACCACTACCATACCGACCAAGGAACGGTAAAATGAAGCGTGACTTTGATCAT GTGACATCACGTCCTATCTCATCACCATTGAGAAGCATGGATGAGAGTTGCATGACTTAT GAGTGTGTTGCGTTCGAGGATGAATCGAGTGGGGAATATAATGCGAAGAGGCAGAAAACA CAAGTGAATGCCAACGATGCTCTGGTGGACGAGATAAAAACTATCAACAACAAACTAGTT GATACTGTGATGAACTTTGCTGATGAAAATGGGACAGATGAAATCATTTATCAGAACGGT GGCGGGATGTTGATCAAACTCTCTTACATTTCCATGTCGCTTTCGCCAAGCCTGAAATCT CTTTTCGCAGCATCTGAAATGACCATTGTCATGCCCGTGAAGCTGTTGGTCCCCGCGGAT TATCCGAAAAGCTCTCCGATCCTTGTCGACAATGACGATGAACAGAGGAGGTTGAGTGAC ATCTCGTACGCGGTCGCAGTGGCATTTGGGTGCGCCGTCGACGAGTTGCCGGAGCCGCGG TCGATCGAGGCGATGGCCATGGCGTGGGATGGCTGCGTGCGGCGGGCCGTCACCGAGGTG GCGCATCGGCACGGCGGAGGAACGTTCAGCTCGAGGCACAACCAGTGGAGGGCCGGGTAC CTGCATGGGCCCATGATGAGCCTGTAG

Peptide Sequence

PEP ID	Os04t0127800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1754439:1759735:1 gene:Os04g0127800 transcript:Os04t0127800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 3, Mediator 15_1 description:Coactivator CBP, KIX domain containing protein. (Os04t0127800-01)
Sequence	MERATAAHPASSSVSAAHWMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIR CEQDALNKTTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSTQRPSSQQQNVCTTPQN PGQVPDQHRASAPNSQIEASQEQTVMVAAPDCYLNFNTTAISPVAMCVHPSQQPQSQQHQ QQAKQLHPTNVVGYNPTSLNQIQGQSVSGQNFQQNHVLGQNASGSGTQQRQLVETPEQHQ LLRMKQQHMRGNQQQNFTQRNQILPAQQAHLGKMQIGHPAVQNNQQNVGMSCQHMTPPQC QVATAQQSSLGCDSPQTLEPIVIAGEVDWREEIFQKIKSFKDAYLSEVLEYDQIVHVPKL TEEQLRSLPVENAEKLRRIRHVKKIIAIMLDLLNTQKSNVRKGMQNIFPIFQQYLGQLRL SISKSKARKTVAKIGCQSQNCSENSHIVNLGSNTAPFTCDARQQKQQEQVISAKTSRMEQ AIMTRTPTPQQESHGCHLLGVPSSCFSPKALQPSSTNTIEECFTPSPVTQTVQPIQVASP HVTSPSAYGKSSVPKPSVARVVSHSASIKSRLASSPSRPEGAHAASPNITSVESTLPTPI AKPGTVRAASPCTPVKSTSQSQLSKPAVTEVDSCRACVTSKLKSPVGKPETAGAASPCAS VKSTVSLDVDSVTEFLQHRVVAPTVANGGSSNQAIHTLVSAAPPKAAHQADDQVQNGAEE MEAKKPFSRLIETLLSSSPEALLHSSNSMRLAIWEADRIPAPSPLPYRPRNGKMKRDFDH VTSRPISSPLRSMDESCMTYECVAFEDESSGEYNAKRQKTQVNANDALVDEIKTINNKLV DTVMNFADENGTDEIIYQNGGGMLIKLSYISMSLSPSLKSLFAASEMTIVMPVKLLVPAD YPKSSPILVDNDDEQRRLSDISYAVAVAFGCAVDELPEPRSIEAMAMAWDGCVRRAVTEV AHRHGGGTFSSRHNQWRAGYLHGPMMSL

Transcript Sequence

Transcript ID	Os04t0127800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1754439:1759735:1 gene:Os04g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 3, Mediator 15_1 description:Coactivator CBP, KIX domain containing protein. (Os04t0127800-01)
Sequence	ACTGCGTCATCTCCAGATTCCCTTCTCCTGCAAGCCTCCTCTTCCGATCGCCGCCGCCCC CGCCGCCGATGGAGCGCGCCACCGCTGCACACCCCGCCTCCTCCTCCGTCTCCGCCGCCC ACTGGATGGCGACGGAGGATCTCGGCCTCCGCCGCAACATCATCAACAACATGGTGAAGA AATTTATGACCATTACCAATTCTCAGCAAGATCATCATTACCGGGAGATCCAAAATTATG CTATCAGATGTGAACAGGACGCGCTTAACAAGACCACCAATAAGGAAGATTATTTGAGAT GCATAGCTCAAAGAATCATGAATATGGAGATGAAAGTAAGACGATCACAATCACTGCAGG CAGGGACGACACCTAGCACACAGAGGCCATCTTCCCAGCAACAAAATGTATGTACCACAC CACAAAATCCAGGCCAAGTGCCAGACCAGCACAGGGCTTCTGCACCAAATTCACAGATCG AAGCTAGCCAAGAACAGACTGTGATGGTGGCAGCTCCGGATTGTTACCTCAACTTCAATA CCACAGCAATTAGTCCAGTGGCAATGTGTGTCCATCCTAGCCAGCAACCTCAGAGTCAAC AACACCAACAACAGGCCAAGCAACTACACCCCACAAACGTTGTCGGATACAACCCAACTA GCTTGAATCAGATTCAAGGACAATCAGTTAGTGGACAAAATTTTCAGCAGAATCATGTAC TAGGGCAGAATGCCAGTGGCAGTGGTACACAACAGAGGCAACTAGTTGAGACACCGGAGC AGCACCAGCTGTTGAGGATGAAGCAGCAACATATGAGGGGAAACCAGCAGCAGAATTTCA CCCAGAGAAACCAAATTCTTCCAGCACAGCAGGCCCATCTTGGCAAGATGCAGATTGGTC ATCCTGCAGTACAGAACAATCAGCAGAATGTTGGAATGTCATGTCAGCATATGACTCCGC CTCAATGTCAAGTTGCCACAGCTCAACAAAGCAGTCTTGGTTGTGATAGCCCTCAAACTT TAGAACCGATCGTAATTGCCGGAGAAGTGGATTGGAGGGAAGAAATATTTCAGAAGATCA AGTCATTCAAGGATGCATACCTTTCCGAAGTTTTGGAATATGATCAAATCGTTCATGTTC CGAAGTTAACAGAGGAGCAACTCCGTTCATTACCTGTTGAGAATGCTGAGAAATTGAGGC GTATAAGACATGTCAAGAAAATTATCGCAATAATGCTAGACTTGTTGAATACCCAGAAAA GCAACGTGCGCAAGGGTATGCAGAATATATTCCCCATATTCCAGCAGTACCTGGGGCAAT TGCGACTTTCCATATCAAAAAGTAAAGCTCGGAAGACAGTGGCAAAAATAGGGTGTCAGT CGCAGAATTGCAGTGAGAATTCTCATATCGTCAATCTTGGTAGCAATACAGCCCCATTCA CTTGTGATGCAAGACAGCAAAAACAGCAAGAGCAAGTTATCAGTGCTAAAACTTCCAGGA TGGAGCAAGCAATCATGACCCGAACTCCCACACCTCAACAAGAAAGTCATGGCTGCCACC TACTAGGAGTACCAAGCTCTTGTTTCTCACCAAAAGCACTGCAACCTTCCTCAACCAATA CTATTGAGGAGTGCTTCACCCCATCCCCGGTAACCCAGACAGTTCAACCAATTCAAGTAG CTTCACCCCATGTTACTTCACCCAGTGCTTATGGAAAATCATCTGTTCCAAAGCCTAGTG TTGCACGAGTTGTTTCACACTCTGCTTCGATAAAGTCAAGATTGGCATCATCCCCTAGCA GGCCAGAAGGTGCGCATGCTGCCTCGCCCAATATTACTTCAGTTGAATCCACATTGCCAA CTCCTATTGCCAAGCCAGGGACTGTACGAGCTGCCTCACCTTGCACTCCAGTCAAATCCA CATCGCAATCGCAGCTTAGCAAGCCAGCAGTTACAGAAGTTGATTCATGCCGTGCTTGTG TGACATCTAAACTGAAATCTCCTGTTGGCAAGCCAGAGACTGCAGGAGCTGCTTCACCAT GTGCTTCTGTGAAGTCCACAGTGTCACTGGACGTTGACAGTGTTACTGAATTCTTGCAGC ACCGTGTTGTAGCACCTACAGTAGCAAATGGTGGTTCTTCTAACCAGGCAATTCATACTC TGGTATCAGCAGCGCCACCTAAAGCTGCTCATCAAGCAGATGATCAGGTGCAAAACGGAG CTGAAGAAATGGAAGCCAAAAAGCCCTTCAGCCGCCTAATTGAAACACTCCTGTCTTCAT CACCGGAAGCACTCCTCCACTCATCTAATTCCATGAGATTGGCTATCTGGGAGGCTGACC GAATACCAGCACCATCACCACTACCATACCGACCAAGGAACGGTAAAATGAAGCGTGACT TTGATCATGTGACATCACGTCCTATCTCATCACCATTGAGAAGCATGGATGAGAGTTGCA TGACTTATGAGTGTGTTGCGTTCGAGGATGAATCGAGTGGGGAATATAATGCGAAGAGGC AGAAAACACAAGTGAATGCCAACGATGCTCTGGTGGACGAGATAAAAACTATCAACAACA AACTAGTTGATACTGTGATGAACTTTGCTGATGAAAATGGGACAGATGAAATCATTTATC AGAACGGTGGCGGGATGTTGATCAAACTCTCTTACATTTCCATGTCGCTTTCGCCAAGCC TGAAATCTCTTTTCGCAGCATCTGAAATGACCATTGTCATGCCCGTGAAGCTGTTGGTCC CCGCGGATTATCCGAAAAGCTCTCCGATCCTTGTCGACAATGACGATGAACAGAGGAGGT TGAGTGACATCTCGTACGCGGTCGCAGTGGCATTTGGGTGCGCCGTCGACGAGTTGCCGG AGCCGCGGTCGATCGAGGCGATGGCCATGGCGTGGGATGGCTGCGTGCGGCGGGCCGTCA CCGAGGTGGCGCATCGGCACGGCGGAGGAACGTTCAGCTCGAGGCACAACCAGTGGAGGG CCGGGTACCTGCATGGGCCCATGATGAGCCTGTAGCACTTGCTCCATCTCTACCATGTTC GTTGTAGACTTTGTTGTAGTGTGTATGGTCAGATTTAAGTTATATCGATGTATACCGGTT ATTTACTCCCGGAAATTCCATTATAGAAGACAAAATTGCATATGTATACAGCGGGAACAA ATGAGGCAGAATCACCAATACATGTTTGTATTTC