Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0125700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1562252:1572696:-1 gene:Os04g0125700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0125700-01)
Sequence	ATGTTTGTTGTGACAATGTTGCAGCTTCTCCTCCTACTCCTCCTACTCCTCTCCATTTCG CTTGATGTTTCACACCTCATTGCTGAAGCAGCAGCAGCAGCAAAGCCACCTGTGTCCTTC AGCTTCAACTTCTCTGATCCATCCACCTACAGCCTAGATGACCTCCTGTTCGAAGGCGAC GCGGCCAAGCCGAAAGACGGGCTGGTCGACCTCACCTCCGGCCGCAGTTGTTATCCCTAT TGCCCCGCCGGCCGGATGTCGTACGCTCACCCGGTGCAGCTCTACGACGACACCACCGGC GGCGAAAAGGTGGTGGTGGCCAGCTTCTCCACGAGGTTCACCTTCACAATCAGACCCATC GACGACGGTATCAGAGGGGATGGTCTGGCTTTCTTCCTGGCCAGTTACCCATCTAAGCTG CCGGCCAACTCGTTCGGCGGCAACCTTGGACTCATCAATAACGGGACGACCACCGCCTTC GGTTCGGACCGATTCATCGCCGTCGAGTTCGACACATACAACAACACTTTCGACCCCAAG AGCATCAACCACATTGGCATTGACATCAACTCCGTCGTCAGTTCCTTGAACACCACACTC TTGCCCAACTTCAGTCTGAACGGGACAATGACAGCCCACATCGAATTCAACGGCATAACG CAGATGCTGGTCGCCTCACTGTGGCTCGCTGGCCGTCCATGGTCTGCAGCGCCTGATTAT CAGGTGAGTTTACGACTGCCAGATCCGATCACGTCGTTGCTCCTGCCGCAGGTGGCCGTG GGTTTTACTGGAGCCACCGCGGACCTCAAGGAGCTCAACCAGATAATGTTATGGTCATTC AACTCAACTCTTACGCTAGTAAACCAAGACAGACGCAATAAGGCACTGCTTTTTGGAGGA CCGATCATCGGAGGAGCTGTTGCATTGGCGTTAGTGCTGTGGTTCTTGATCTCTTGTTTG ATGCAGAAGAGGGTACGTAATACCTTTGGAAAGGGCACAGGCGGCGCCAGGCGATTCGAA TACGACGATTTGGCCATCGCGACTGGCAATTTCTCTGATGATCGCAAGCTCGGAGAGGGG GCCTTTGGGGTAGTGTACAGCGGATTCCTGAAGCGGTTGGAGCGTGAAGTTGCTGTGAAG AAAATAGTGAGGGAGTCCAGCCAAGAGCATAAAGACTTCTTCGCCGAAGTCAGCACTATC AGCGAAGCTAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTGCCGGGGACACAGC TGGAACATTCTCCGTTTCATGTGCAGCTGTTTATGGAGCAACAATAATAAGGAGCTCTTC CTTGTATATGAATTGATGAAAAATGGCAACCTCAACGACTACTTGTACAAGAGCGAGTCA GCAGCAGTACTTTCATGGCAAACAAGGTATAAAATAGCCAAGGACATTGGGTCAGGCCTG TTGTACCTACATCACGAGTGCTACCCATATATCATACACAGAGATATCAAACCAGGCAAC GTACTCTTGGACGACGATTTCAACGCCAAGCTCGCTGATTTTGGTCTGTCAAGGGTCGCG AACCCGAACAATGCAACGCTGAAGACAACTGCCATAGGCTCACAAGGATACATTGATCCA CAGTGCATGAAGGATGGTGAGGTCAGCTTCAACCGTAACTCCGACGTGTACAGCTTCGGC ATTGCCCTTCTTGAGATCGTCTGCGCGAGGAAACACAGGGAGCAGATCTGGGGCCTATAC AAAAGCGGCGGTGATGTCGTCGAGGCTGCAGACTCAAGGCTAGCCATTGGTGTTGATGGC GCTGAAAGGAGGGAGATGGAGCGTGCCATCATCTTAGGGCTCTGGTGCTCTGTCTTCGAG ACTAAACACCGGCCTACCATGCTCCAAGCAATGGATGTCCTGGAGCGTGATGCGCAGTTG CCTGACCTTAACTTAATCGTCAACTCTAATTTATCTTCAACAGACGCATCGTCAAGTTCG CCGGTCGAGAAGAGATATGACTCTGAGGAGGCACCGCTGGTTGCAGGCAGCTCTTCTAGC CAGCTAGCTGGTCGGTGA

Peptide Sequence

PEP ID	Os04t0125700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1562252:1572696:-1 gene:Os04g0125700 transcript:Os04t0125700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0125700-01)
Sequence	MFVVTMLQLLLLLLLLLSISLDVSHLIAEAAAAAKPPVSFSFNFSDPSTYSLDDLLFEGD AAKPKDGLVDLTSGRSCYPYCPAGRMSYAHPVQLYDDTTGGEKVVVASFSTRFTFTIRPI DDGIRGDGLAFFLASYPSKLPANSFGGNLGLINNGTTTAFGSDRFIAVEFDTYNNTFDPK SINHIGIDINSVVSSLNTTLLPNFSLNGTMTAHIEFNGITQMLVASLWLAGRPWSAAPDY QVSLRLPDPITSLLLPQVAVGFTGATADLKELNQIMLWSFNSTLTLVNQDRRNKALLFGG PIIGGAVALALVLWFLISCLMQKRVRNTFGKGTGGARRFEYDDLAIATGNFSDDRKLGEG AFGVVYSGFLKRLEREVAVKKIVRESSQEHKDFFAEVSTISEAKHKNLVKFFGWCCRGHS WNILRFMCSCLWSNNNKELFLVYELMKNGNLNDYLYKSESAAVLSWQTRYKIAKDIGSGL LYLHHECYPYIIHRDIKPGNVLLDDDFNAKLADFGLSRVANPNNATLKTTAIGSQGYIDP QCMKDGEVSFNRNSDVYSFGIALLEIVCARKHREQIWGLYKSGGDVVEAADSRLAIGVDG AERREMERAIILGLWCSVFETKHRPTMLQAMDVLERDAQLPDLNLIVNSNLSSTDASSSS PVEKRYDSEEAPLVAGSSSSQLAGR

Transcript Sequence

Transcript ID	Os04t0125700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1562252:1572696:-1 gene:Os04g0125700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0125700-01)
Sequence	CAGCCTGCTTAATTAGTTCACACATCATGTTTGTTGTGACAATGTTGCAGCTTCTCCTCC TACTCCTCCTACTCCTCTCCATTTCGCTTGATGTTTCACACCTCATTGCTGAAGCAGCAG CAGCAGCAAAGCCACCTGTGTCCTTCAGCTTCAACTTCTCTGATCCATCCACCTACAGCC TAGATGACCTCCTGTTCGAAGGCGACGCGGCCAAGCCGAAAGACGGGCTGGTCGACCTCA CCTCCGGCCGCAGTTGTTATCCCTATTGCCCCGCCGGCCGGATGTCGTACGCTCACCCGG TGCAGCTCTACGACGACACCACCGGCGGCGAAAAGGTGGTGGTGGCCAGCTTCTCCACGA GGTTCACCTTCACAATCAGACCCATCGACGACGGTATCAGAGGGGATGGTCTGGCTTTCT TCCTGGCCAGTTACCCATCTAAGCTGCCGGCCAACTCGTTCGGCGGCAACCTTGGACTCA TCAATAACGGGACGACCACCGCCTTCGGTTCGGACCGATTCATCGCCGTCGAGTTCGACA CATACAACAACACTTTCGACCCCAAGAGCATCAACCACATTGGCATTGACATCAACTCCG TCGTCAGTTCCTTGAACACCACACTCTTGCCCAACTTCAGTCTGAACGGGACAATGACAG CCCACATCGAATTCAACGGCATAACGCAGATGCTGGTCGCCTCACTGTGGCTCGCTGGCC GTCCATGGTCTGCAGCGCCTGATTATCAGGTGAGTTTACGACTGCCAGATCCGATCACGT CGTTGCTCCTGCCGCAGGTGGCCGTGGGTTTTACTGGAGCCACCGCGGACCTCAAGGAGC TCAACCAGATAATGTTATGGTCATTCAACTCAACTCTTACGCTAGTAAACCAAGACAGAC GCAATAAGGCACTGCTTTTTGGAGGACCGATCATCGGAGGAGCTGTTGCATTGGCGTTAG TGCTGTGGTTCTTGATCTCTTGTTTGATGCAGAAGAGGGTACGTAATACCTTTGGAAAGG GCACAGGCGGCGCCAGGCGATTCGAATACGACGATTTGGCCATCGCGACTGGCAATTTCT CTGATGATCGCAAGCTCGGAGAGGGGGCCTTTGGGGTAGTGTACAGCGGATTCCTGAAGC GGTTGGAGCGTGAAGTTGCTGTGAAGAAAATAGTGAGGGAGTCCAGCCAAGAGCATAAAG ACTTCTTCGCCGAAGTCAGCACTATCAGCGAAGCTAAGCACAAGAATCTCGTCAAGTTTT TTGGTTGGTGCTGCCGGGGACACAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTAT GGAGCAACAATAATAAGGAGCTCTTCCTTGTATATGAATTGATGAAAAATGGCAACCTCA ACGACTACTTGTACAAGAGCGAGTCAGCAGCAGTACTTTCATGGCAAACAAGGTATAAAA TAGCCAAGGACATTGGGTCAGGCCTGTTGTACCTACATCACGAGTGCTACCCATATATCA TACACAGAGATATCAAACCAGGCAACGTACTCTTGGACGACGATTTCAACGCCAAGCTCG CTGATTTTGGTCTGTCAAGGGTCGCGAACCCGAACAATGCAACGCTGAAGACAACTGCCA TAGGCTCACAAGGATACATTGATCCACAGTGCATGAAGGATGGTGAGGTCAGCTTCAACC GTAACTCCGACGTGTACAGCTTCGGCATTGCCCTTCTTGAGATCGTCTGCGCGAGGAAAC ACAGGGAGCAGATCTGGGGCCTATACAAAAGCGGCGGTGATGTCGTCGAGGCTGCAGACT CAAGGCTAGCCATTGGTGTTGATGGCGCTGAAAGGAGGGAGATGGAGCGTGCCATCATCT TAGGGCTCTGGTGCTCTGTCTTCGAGACTAAACACCGGCCTACCATGCTCCAAGCAATGG ATGTCCTGGAGCGTGATGCGCAGTTGCCTGACCTTAACTTAATCGTCAACTCTAATTTAT CTTCAACAGACGCATCGTCAAGTTCGCCGGTCGAGAAGAGATATGACTCTGAGGAGGCAC CGCTGGTTGCAGGCAGCTCTTCTAGCCAGCTAGCTGGTCGGTGAGCATCATGCTTGTCAA ACAAGCTGAGACAACAAAATTCAATAAGCCTGGTGTATCACCAAGACTTCCATTCTCACG AGAGCTGCTTAGTGCTGACTGCACATTCTCATGTTGATCAGTTTATCATGTAATTGCCTT TTTCAAGAAACTTATAAACGAATAGACTACCTAAATTTGCTGCGTTGCTTTGTACGTAGC CAGATATATTAAACTTATTTCAAAGTACATC