Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0122000-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:1330063:1335560:-1 gene:Os04g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-01);Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-02);Leucine-rich repeat domain containing protein. (Os04t0122000-03)
Sequence	AGCCGCCGGCGAACGGCGCCGACACTTTCCACCACTCTGTCGTCGTTGCTTCTCCTACTG GCGACGACGACGACCAAATTGTGCCGGAGCTGCAGCGACGGCGAGCGTCACGCCCTCCTA CGCCGCATCCAGCCGCTCATCGGCCCTGAGTTCTCCTCCAGCGGACGGTTGGATTGGGAC GAGGCCGTGGACTGCTGCCGCTGGGAGGGCGTCACATGCAGCGTCGCCGGCCGACGACGA GAAGCAGCAGCTGGTGGCCGCCGTGTCGTGTCGCTGTCGCTCCCTGGAGTCGGCATCGCC GGCGCCGTGGATGCCGCCGTGCTTGCGCCGTTCACGGCGCTTGAGAAGCTCGACCTGTCC GGCAATCAAATCACTAGCTTTTCAGCTGCTAATCGCTCAGACATGGTTGTCGGTGCTGTT CTCAACAACTTAACCGCACTTACGGAGCTGCACCTAGCCGGGAATGAGATCACCACCACA GGCTGGATTTCCAATTTGACGTCCCTGCAGGTTATTGACATGTCCAGCAATAAAGTACAT GAGCTCAACGGTATTTGTGGCCTCCATCAACTAAAATATCTAAGCCTTGGTTTTAACATG ATACAAGGAGTAATTAATCCATGCTTGGGGAAATTGCAGTACCTGGTATACTTGGACATG GGATCAAATTTTCTCACAGGTGAGATTGGACAATATTTACTAAGCAACTTAACCCAAGTA GAAGAAGTACATCTTGGGGACAACAATCTTACTGGCACATTTGACTTCTCGTCTTTGGCT AACAACTCTGAGCTCCACAGCATCGTCCTCTCGAACAACTGCAAACTAGAAATCGAAACG GAGCTTGTAAGGTGGACACCGTTGTTCCAGCTCGAATACTTGAATCTAAGCAATAGTATT GTCAACAAGAGAAGCAACGGGATCATCCCAACTTTTCTGTCAGCCCAAGTGAGCCTCTCT GGGATTGATCTCTCCATATGTTCACTCCAGGGGAGGATCCCATCTTGGATGTTGTTGTAT AACGTTTCTTTAGGTTTCCTCTTGCTGCGCGGTAATAGCATGGATTTCCTCGACACTGGC AATCTCGGAGCCAACGTTACGTCATCAATGGAGGTGCTTGATCTGTCTGACAACAGGATA TCAATGAAAATGCCATACAACTTTGGAAGTCTATTTCCATATCTAAAGTACCTTGACATG TCTTCCAACATGCTGAATGGCGGAGTTCCATCACTAGCAGAAGCCGCGTCATCGTTGCAG TTTCTTGACTTGTCATTTAACATGCTCAATGGGGAGATATCGCCGGAATTAATAGGGAAT GCATCCATTTTGACATCCCTTCTGCTCTCACACAATGACCTAACTGGGCCTATGCCACCC TTCCATTGGAGCCTAGGGCAGTTGACTCACCTGAGCGTTGAAAACAACCAACTATCTGGT CGTTTGCCGCCTCTACTTACGAACTGCACCAACCTTGAGAATCTCAATGTGAGGAATAAC CGTTTATCTGGTGTAATCCCAGTAGGCCTCCTCAGCTTTGAGAAGCTTGGTGCTCTCCTC CTTGGAGGAAACCAGTTTCATGGTGTCATTCCTTGGGATATTTGCCTCAACAACCATATC CACTTCATAGATCTTTCCAATAATTGGTTCTCTGGTGAGATACAGGTTGCTTATACAGTG TTTTCTGGTCAGAGCTGCCAATGA

Peptide Sequence

PEP ID	Os04t0122000-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:1330063:1335560:-1 gene:Os04g0122000 transcript:Os04t0122000-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-01);Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-02);Leucine-rich repeat domain containing protein. (Os04t0122000-03)
Sequence	SRRRTAPTLSTTLSSLLLLLATTTTKLCRSCSDGERHALLRRIQPLIGPEFSSSGRLDWD EAVDCCRWEGVTCSVAGRRREAAAGGRRVVSLSLPGVGIAGAVDAAVLAPFTALEKLDLS GNQITSFSAANRSDMVVGAVLNNLTALTELHLAGNEITTTGWISNLTSLQVIDMSSNKVH ELNGICGLHQLKYLSLGFNMIQGVINPCLGKLQYLVYLDMGSNFLTGEIGQYLLSNLTQV EEVHLGDNNLTGTFDFSSLANNSELHSIVLSNNCKLEIETELVRWTPLFQLEYLNLSNSI VNKRSNGIIPTFLSAQVSLSGIDLSICSLQGRIPSWMLLYNVSLGFLLLRGNSMDFLDTG NLGANVTSSMEVLDLSDNRISMKMPYNFGSLFPYLKYLDMSSNMLNGGVPSLAEAASSLQ FLDLSFNMLNGEISPELIGNASILTSLLLSHNDLTGPMPPFHWSLGQLTHLSVENNQLSG RLPPLLTNCTNLENLNVRNNRLSGVIPVGLLSFEKLGALLLGGNQFHGVIPWDICLNNHI HFIDLSNNWFSGEIQVAYTVFSGQSCQ

Transcript Sequence

Transcript ID	Os04t0122000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1330063:1335560:-1 gene:Os04g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-01);Leucine-rich repeat, N-terminal domain containing protein. (Os04t0122000-02);Leucine-rich repeat domain containing protein. (Os04t0122000-03)
Sequence	GGAGCCGCCGGCGAACGGCGCCGACACTTTCCACCACTCTGTCGTCGTTGCTTCTCCTAC TGGCGACGACGACGACCAAATTGTGCCGGAGCTGCAGCGACGGCGAGCGTCACGCCCTCC TACGCCGCATCCAGCCGCTCATCGGCCCTGAGTTCTCCTCCAGCGGACGGTTGGATTGGG ACGAGGCCGTGGACTGCTGCCGCTGGGAGGGCGTCACATGCAGCGTCGCCGGCCGACGAC GAGAAGCAGCAGCTGGTGGCCGCCGTGTCGTGTCGCTGTCGCTCCCTGGAGTCGGCATCG CCGGCGCCGTGGATGCCGCCGTGCTTGCGCCGTTCACGGCGCTTGAGAAGCTCGACCTGT CCGGCAATCAAATCACTAGCTTTTCAGCTGCTAATCGCTCAGACATGGTTGTCGGTGCTG TTCTCAACAACTTAACCGCACTTACGGAGCTGCACCTAGCCGGGAATGAGATCACCACCA CAGGCTGGATTTCCAATTTGACGTCCCTGCAGGTTATTGACATGTCCAGCAATAAAGTAC ATGAGCTCAACGGTATTTGTGGCCTCCATCAACTAAAATATCTAAGCCTTGGTTTTAACA TGATACAAGGAGTAATTAATCCATGCTTGGGGAAATTGCAGTACCTGGTATACTTGGACA TGGGATCAAATTTTCTCACAGGTGAGATTGGACAATATTTACTAAGCAACTTAACCCAAG TAGAAGAAGTACATCTTGGGGACAACAATCTTACTGGCACATTTGACTTCTCGTCTTTGG CTAACAACTCTGAGCTCCACAGCATCGTCCTCTCGAACAACTGCAAACTAGAAATCGAAA CGGAGCTTGTAAGGTGGACACCGTTGTTCCAGCTCGAATACTTGAATCTAAGCAATAGTA TTGTCAACAAGAGAAGCAACGGGATCATCCCAACTTTTCTGTCAGCCCAAGTGAGCCTCT CTGGGATTGATCTCTCCATATGTTCACTCCAGGGGAGGATCCCATCTTGGATGTTGTTGT ATAACGTTTCTTTAGGTTTCCTCTTGCTGCGCGGTAATAGCATGGATTTCCTCGACACTG GCAATCTCGGAGCCAACGTTACGTCATCAATGGAGGTGCTTGATCTGTCTGACAACAGGA TATCAATGAAAATGCCATACAACTTTGGAAGTCTATTTCCATATCTAAAGTACCTTGACA TGTCTTCCAACATGCTGAATGGCGGAGTTCCATCACTAGCAGAAGCCGCGTCATCGTTGC AGTTTCTTGACTTGTCATTTAACATGCTCAATGGGGAGATATCGCCGGAATTAATAGGGA ATGCATCCATTTTGACATCCCTTCTGCTCTCACACAATGACCTAACTGGGCCTATGCCAC CCTTCCATTGGAGCCTAGGGCAGTTGACTCACCTGAGCGTTGAAAACAACCAACTATCTG GTCGTTTGCCGCCTCTACTTACGAACTGCACCAACCTTGAGAATCTCAATGTGAGGAATA ACCGTTTATCTGGTGTAATCCCAGTAGGCCTCCTCAGCTTTGAGAAGCTTGGTGCTCTCC TCCTTGGAGGAAACCAGTTTCATGGTGTCATTCCTTGGGATATTTGCCTCAACAACCATA TCCACTTCATAGATCTTTCCAATAATTGGTTCTCTGGTGAGATACAGGTTGCTTATACAG TGTTTTCTGGTCAGAGCTGCCAATGAACTCTGAGGATGACCCATTTGGCAACATCACACA GAGAAGACAGACATATGTCGAATTCACGACGAAAGGGGAGAGCTTGACATACATGGGAAT GCCTTTAGAGCTCATGATAGGCATAGATTTGTCGATGAATCGGCTATCTGGACCCATCCC TAGCTCTGTTGGGTTCTTGCTGCAGCTCAAATCGCTCAACCTATCACACAACAAGCTTGT TGGTTCGATACCTGACACGTTCATGTACCTGCATGAAATGGAGAGCATGGATCTCTCACA CAACCATCTCAATGGGAGTGTCCCAGTGGAGCTAGCCAACCTCTCCTTCCTGAGCTTCTT CAGTGTTGCATACAACAATCTCTCCGGTGAGATTCCCTTTGAATCACAGTTTTGTACGTT GAACGGAACGGCATTCGAAGGGAATGAGAACCTCTGTGGAGAAATTGTTGACAAGATTTG TCCAATGAACTCGAACTGCTCACATGATAGCGATGATGAGATGCATCAGTTGTTGTCAAC GGATACCATGGACACGCCGCTGATCTACTGGTCCTTCGTTGCTGGGTCCTTCGCCATTGG CTTTTGGGGCATCATTGCATTACTTATATGGAATACAGCCTTCAGGAGCAGGCTCTGCAG CTTCATGGATGGATGCATGTCTAAGATGGGCTGGTTTCTTGTGCCTTGATTTAAAGCCAC TTGTGCCCTCAACTACAATATCAATCAATTTTTGCTCTGTTTCTATTCCAATACAGTATT CCGCATTAAACAGATTTTTGTAAGAGGAGTTGAATTTACAGAATTCCTTTTGATGGAAAA GCTAGTAACTCCTTATTCACTCAACATTGGAAACTGGTTGTTTTGAAGTCC