Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0121300-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:1280571:1284856:1 gene:Os04g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 35, SUBTILISIN 35 description:Similar to OSIGBa0115D20.4 protein. (Os04t0121300-00)
Sequence	ATGCTGATTAGCGCCAAAACTCTATACATCGTTTACCTCGGTGAGAGGCAGCACGAAGAT GCTGATCTTGTCACTGCATCACACCATGATATGCTCACCTCAATTCTTGGGAGCAAGGAG GAGACTCTCAGGTCGATTGTCTACAGCTACAGGCATGGTTTTTCTGGCTTCTCTGCTATG CTCACACAATCACAAGCCAGAAAGATAGCGGGCCTGCCCGGGGTCCTCAGTGTAACTGAA AACCAAATATACAAAACGCATACAACACGAAGTTGGGATTTTCTTGGACTTGATTACAAG CCGACAAATGGGCTGCTCGCGAAAGCTAGATATGGAGAAGGCGTGATCATTGGTGTCGTT GACACAGGAATCACACCCGAGTCACCAAGCTTTGACGATGCCGGATATGGCACCCCTCCA TCCAAGTGGAAGGGGATTTGCCAAGTAGGTCCTTCATTTGGTACTAACAGTTGCAACAGG AAGATCATCGGTGCACGGTGGTACGCTTACGATGTCCCAAATGGCACGCTCGACACAGAA GTGCTATCACCCAGGGATGTCCATGGGCATGGCACCCACACGGCCTCAACAGCCGGTGGT AACATCGTCCACAATGTTAGCCGTCTCGGGCTAGCGGCTGGCACAGCGCACGGTGGCGCA CCCCGTGCACGGTTAGCCATATACAAGGCTTGTTGGGCCACACCTGACGGCACTGGATGT TCTGGCGCTGGCTTGTTGAAAGCCATGGACGATGCTATCCATGATGGTGTTGACATTTTA TCACTTTCCATTGGTGGTCCGTTTGAACATATGGGCACACTGCATGTTGTTGCTAATGGC ATTGCTGTTGTGTACTCTGCTGGGAACGATGGACCCATCGCTCAGACGGTGGAGAACTCA TCCCCGTGGTTACTAACGGTGGCTGCAGCCACCATGGATCGGTCTTTCCCTGTGGTTATC ACCTTAGGAAATAATGAAAAGTTTGTGGCACAATCCTTCGTCGTAACAGGAAGTGCGAGT CAGTTCAGTGAAATACAAATGTACGACAATGACAACTGCAATGCTGACAATATCGACAAC ACTGTGAAGGGGATGATCGTTTTCTGCTTCATCACGAAATTTGACATGGAAAACTATGAT AGAATCATCAACACAGTGGCCTCCAAAGTAGCCTCCAAAGGAGGCCGAGGGGTTATCTTT CCGAAATACAGCACTGACTTATTCCTCAGGGAGGACTTGATCACTTTTGATATTCCATTT GTCCTCGTGGACTACGAGATTTCTTACAGGATTCGCCAGTACATCATAAATAATGAAAAT GGTAACATCCCAAAGGCGAAGATATCATTAACCAAGACAATGGTGGGAAGTGAAAATTCT GCTCCCAAAATAGCAGCTTTCTCATCGAGGGGCCCTAGTTATATCTATCCTGGGGTTCTC AAGCCAGACATTGCTGCACCAGGGGTTGCGATTTTAGCTGCTTCACCAAATACTCCAGAG TTCAAAGGTGTTCCCTACCGTTTTGATTCTGGAACATCTATGGCTTGCCCACATGTATCT GGGATCATTGCCGTGCTCAAATCCCTTCATCCTGAATGGTCACCTGCTGCCCTCAAATCT GCGATTATGACTACAGCAAATACCTTTGACAACAATGGGATGCCTATGCAAGCTAATGGA AGAGTTCCAAAGATTGCCGATCCGTTTGATTATGGAGCAGGCTTTGTTAATCCGATCATG GCGGCTGATCCAGGCCTCATCTATGACATCAACCCATTGGATTATCTCAAGTTCTTCAAT TGCATGGGAGGACTAGGCTCACAAGACAACTGCACGACGACAAAAGGATCCGTGATTGAC TTGAACCTGCCATCGATCGCCATTCCCAACCTTAGGACATCCGAAACTGCGGTGCGCACT GTCACTAACGTTGGTGTCCAGCAAGAGGTGGTGTACAAAGCTTTCCTCGACCCTCCTGCT GGAATCGAGATGGCTGTCGAGCCATCAGAGCTAGTGTTCAGCAAGGACAAGAAGGATCAA AGCTTCAAGGTGACCTTCAAGGCGACACGGAAGGTCCAAGGGGACTACACGTTCGGAAGT TTGGCATGGCATGATGGTGGCAGCCACTGGGTTCGAATCCCCATCGCAGTTCACATTGTG ATTGAAGAGATATACTCCAATATTTCCTAA

Peptide Sequence

PEP ID	Os04t0121300-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:1280571:1284856:1 gene:Os04g0121300 transcript:Os04t0121300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 35, SUBTILISIN 35 description:Similar to OSIGBa0115D20.4 protein. (Os04t0121300-00)
Sequence	MLISAKTLYIVYLGERQHEDADLVTASHHDMLTSILGSKEETLRSIVYSYRHGFSGFSAM LTQSQARKIAGLPGVLSVTENQIYKTHTTRSWDFLGLDYKPTNGLLAKARYGEGVIIGVV DTGITPESPSFDDAGYGTPPSKWKGICQVGPSFGTNSCNRKIIGARWYAYDVPNGTLDTE VLSPRDVHGHGTHTASTAGGNIVHNVSRLGLAAGTAHGGAPRARLAIYKACWATPDGTGC SGAGLLKAMDDAIHDGVDILSLSIGGPFEHMGTLHVVANGIAVVYSAGNDGPIAQTVENS SPWLLTVAAATMDRSFPVVITLGNNEKFVAQSFVVTGSASQFSEIQMYDNDNCNADNIDN TVKGMIVFCFITKFDMENYDRIINTVASKVASKGGRGVIFPKYSTDLFLREDLITFDIPF VLVDYEISYRIRQYIINNENGNIPKAKISLTKTMVGSENSAPKIAAFSSRGPSYIYPGVL KPDIAAPGVAILAASPNTPEFKGVPYRFDSGTSMACPHVSGIIAVLKSLHPEWSPAALKS AIMTTANTFDNNGMPMQANGRVPKIADPFDYGAGFVNPIMAADPGLIYDINPLDYLKFFN CMGGLGSQDNCTTTKGSVIDLNLPSIAIPNLRTSETAVRTVTNVGVQQEVVYKAFLDPPA GIEMAVEPSELVFSKDKKDQSFKVTFKATRKVQGDYTFGSLAWHDGGSHWVRIPIAVHIV IEEIYSNIS

Transcript Sequence

Transcript ID	Os04t0121300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1280571:1284856:1 gene:Os04g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 35, SUBTILISIN 35 description:Similar to OSIGBa0115D20.4 protein. (Os04t0121300-00)
Sequence	ATGCTGATTAGCGCCAAAACTCTATACATCGTTTACCTCGGTGAGAGGCAGCACGAAGAT GCTGATCTTGTCACTGCATCACACCATGATATGCTCACCTCAATTCTTGGGAGCAAGGAG GAGACTCTCAGGTCGATTGTCTACAGCTACAGGCATGGTTTTTCTGGCTTCTCTGCTATG CTCACACAATCACAAGCCAGAAAGATAGCGGGCCTGCCCGGGGTCCTCAGTGTAACTGAA AACCAAATATACAAAACGCATACAACACGAAGTTGGGATTTTCTTGGACTTGATTACAAG CCGACAAATGGGCTGCTCGCGAAAGCTAGATATGGAGAAGGCGTGATCATTGGTGTCGTT GACACAGGAATCACACCCGAGTCACCAAGCTTTGACGATGCCGGATATGGCACCCCTCCA TCCAAGTGGAAGGGGATTTGCCAAGTAGGTCCTTCATTTGGTACTAACAGTTGCAACAGG AAGATCATCGGTGCACGGTGGTACGCTTACGATGTCCCAAATGGCACGCTCGACACAGAA GTGCTATCACCCAGGGATGTCCATGGGCATGGCACCCACACGGCCTCAACAGCCGGTGGT AACATCGTCCACAATGTTAGCCGTCTCGGGCTAGCGGCTGGCACAGCGCACGGTGGCGCA CCCCGTGCACGGTTAGCCATATACAAGGCTTGTTGGGCCACACCTGACGGCACTGGATGT TCTGGCGCTGGCTTGTTGAAAGCCATGGACGATGCTATCCATGATGGTGTTGACATTTTA TCACTTTCCATTGGTGGTCCGTTTGAACATATGGGCACACTGCATGTTGTTGCTAATGGC ATTGCTGTTGTGTACTCTGCTGGGAACGATGGACCCATCGCTCAGACGGTGGAGAACTCA TCCCCGTGGTTACTAACGGTGGCTGCAGCCACCATGGATCGGTCTTTCCCTGTGGTTATC ACCTTAGGAAATAATGAAAAGTTTGTGGCACAATCCTTCGTCGTAACAGGAAGTGCGAGT CAGTTCAGTGAAATACAAATGTACGACAATGACAACTGCAATGCTGACAATATCGACAAC ACTGTGAAGGGGATGATCGTTTTCTGCTTCATCACGAAATTTGACATGGAAAACTATGAT AGAATCATCAACACAGTGGCCTCCAAAGTAGCCTCCAAAGGAGGCCGAGGGGTTATCTTT CCGAAATACAGCACTGACTTATTCCTCAGGGAGGACTTGATCACTTTTGATATTCCATTT GTCCTCGTGGACTACGAGATTTCTTACAGGATTCGCCAGTACATCATAAATAATGAAAAT GGTAACATCCCAAAGGCGAAGATATCATTAACCAAGACAATGGTGGGAAGTGAAAATTCT GCTCCCAAAATAGCAGCTTTCTCATCGAGGGGCCCTAGTTATATCTATCCTGGGGTTCTC AAGCCAGACATTGCTGCACCAGGGGTTGCGATTTTAGCTGCTTCACCAAATACTCCAGAG TTCAAAGGTGTTCCCTACCGTTTTGATTCTGGAACATCTATGGCTTGCCCACATGTATCT GGGATCATTGCCGTGCTCAAATCCCTTCATCCTGAATGGTCACCTGCTGCCCTCAAATCT GCGATTATGACTACAGCAAATACCTTTGACAACAATGGGATGCCTATGCAAGCTAATGGA AGAGTTCCAAAGATTGCCGATCCGTTTGATTATGGAGCAGGCTTTGTTAATCCGATCATG GCGGCTGATCCAGGCCTCATCTATGACATCAACCCATTGGATTATCTCAAGTTCTTCAAT TGCATGGGAGGACTAGGCTCACAAGACAACTGCACGACGACAAAAGGATCCGTGATTGAC TTGAACCTGCCATCGATCGCCATTCCCAACCTTAGGACATCCGAAACTGCGGTGCGCACT GTCACTAACGTTGGTGTCCAGCAAGAGGTGGTGTACAAAGCTTTCCTCGACCCTCCTGCT GGAATCGAGATGGCTGTCGAGCCATCAGAGCTAGTGTTCAGCAAGGACAAGAAGGATCAA AGCTTCAAGGTGACCTTCAAGGCGACACGGAAGGTCCAAGGGGACTACACGTTCGGAAGT TTGGCATGGCATGATGGTGGCAGCCACTGGGTTCGAATCCCCATCGCAGTTCACATTGTG ATTGAAGAGATATACTCCAATATTTCCTAA