Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0119400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1136017:1139638:1 gene:Os04g0119400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 component, alpha subunit. (Os04t0119400-01)
Sequence	ATGGCCGCCGCGTCCTCCTTCACCGCCGCCGCCAAGTTCTTGGCGCCGGTGTCCGCGAGA TCCGCCGGGGACTACAAGCCGCCGCTCCCGCTCCCGGCCTCCGCCTCCCTCAGGCCCGGG AGGAAGCCCGCGCCCCGCCTCCGCACCGCGCTCGCCGTCTCCTCCGACGTGCTCCCCGGG AACAAGGCCGCCCCCGCCGCCGCCGCCCACTCCGCTGTCACGCGGGAAGAGGCTTTGGAG CTGTACGAGGACATGGTTCTTGGCCGTATTTTCGAGGATATGTGCGCGCAAATGTACTAC CGTGGCAAGATGTTTGGTTTTGTCCATTTATACAATGGGCAAGAAGCTGTCTCCACTGGC TTCATCAAGCTGCTCAACCAAGCTGACTGTGTTGTCAGCACATACCGTGACCACGTCCAT GCCCTATCCAAGGGTGTCCCTGCACGTTCTGTCATGGCTGAGCTTTTCGGTAAGGCCACT GGCTGCTGCCGTGGACAAGGTGGTTCTATGCACATGTTCTCTGAACCCCACAACCTCCTT GGAGGTTTTGCCTTCATCGGAGAGGGCATCCCTGTTGCTACTGGTGCTGCCTTTGCTGCT AAATACCGCCATGAGGTGCTCAAGCAGTCTAGCCCTGATGGACTTGATGTAACCCTGGCA TTCTTTGGTGATGGTACCTGTAACAATGGCCAATTCTTTGAGTGCCTGAACATGGCTCAG CTTTGGAAGCTTCCTATTGTGTTTGTTGTGGAGAACAATCTATGGGCAATTGGGATGTCG CATCTTAGGGCTACTTCAGACCCAGAGATTTATAAGAAGGGTCCAGCGTTTGGAATGCCC GGCGTGCATGTTGATGGGATGGATGTCCTGAAGGTCAGGGAGGTGGCTAAGGAGGCCATT GAGAGGGCAAGGAGAGGTGAAGGACCGACTCTTGTGGAGTGTGAGACTTACCGGTTCAGA GGGCATTCTCTTGCTGATCCAGATGAGCTCAGGAGACCTGATGAGAAATCTCATTACGCC GCAAGGGACCCCATTACAGCCTTGAAGAAGTACATCATCGAACAGAACCTTGCAACTGAA TCCGAGCTGAAGAGCATCGAGAAAAAGATCGATGATGTTGTTGAAGAGGCCGTGGAGTTC GCTGACGCAAGCCCGCTCCCTCCCCGGAGCCAGCTTCTGGAAAACGTGTTCTCAGATCCC AAGGGCTTTGGAATTGGCCCTGACGGGAAGTACCGGTGTGAGGATCCCTTGTTCACGCAA GGCACGGCCCAAGTCTGA

Peptide Sequence

PEP ID	Os04t0119400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1136017:1139638:1 gene:Os04g0119400 transcript:Os04t0119400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 component, alpha subunit. (Os04t0119400-01)
Sequence	MAAASSFTAAAKFLAPVSARSAGDYKPPLPLPASASLRPGRKPAPRLRTALAVSSDVLPG NKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG FIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLL GGFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQ LWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAI ERARRGEGPTLVECETYRFRGHSLADPDELRRPDEKSHYAARDPITALKKYIIEQNLATE SELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVFSDPKGFGIGPDGKYRCEDPLFTQ GTAQV

Transcript Sequence

Transcript ID	Os04t0119400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1136017:1139638:1 gene:Os04g0119400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 component, alpha subunit. (Os04t0119400-01)
Sequence	ATTCCCCCATCTTCCTCGTTCTCTCCGCCTCCTCCCCACTCTCCATTTATACTCCTCTTC TCCTCTCCATCGCCGCATTGCTCGCCACCCCGACGACGACGACGACGACGGCGACGGCGG AGGAGTAGAGACAGAGAGATGGCCGCCGCGTCCTCCTTCACCGCCGCCGCCAAGTTCTTG GCGCCGGTGTCCGCGAGATCCGCCGGGGACTACAAGCCGCCGCTCCCGCTCCCGGCCTCC GCCTCCCTCAGGCCCGGGAGGAAGCCCGCGCCCCGCCTCCGCACCGCGCTCGCCGTCTCC TCCGACGTGCTCCCCGGGAACAAGGCCGCCCCCGCCGCCGCCGCCCACTCCGCTGTCACG CGGGAAGAGGCTTTGGAGCTGTACGAGGACATGGTTCTTGGCCGTATTTTCGAGGATATG TGCGCGCAAATGTACTACCGTGGCAAGATGTTTGGTTTTGTCCATTTATACAATGGGCAA GAAGCTGTCTCCACTGGCTTCATCAAGCTGCTCAACCAAGCTGACTGTGTTGTCAGCACA TACCGTGACCACGTCCATGCCCTATCCAAGGGTGTCCCTGCACGTTCTGTCATGGCTGAG CTTTTCGGTAAGGCCACTGGCTGCTGCCGTGGACAAGGTGGTTCTATGCACATGTTCTCT GAACCCCACAACCTCCTTGGAGGTTTTGCCTTCATCGGAGAGGGCATCCCTGTTGCTACT GGTGCTGCCTTTGCTGCTAAATACCGCCATGAGGTGCTCAAGCAGTCTAGCCCTGATGGA CTTGATGTAACCCTGGCATTCTTTGGTGATGGTACCTGTAACAATGGCCAATTCTTTGAG TGCCTGAACATGGCTCAGCTTTGGAAGCTTCCTATTGTGTTTGTTGTGGAGAACAATCTA TGGGCAATTGGGATGTCGCATCTTAGGGCTACTTCAGACCCAGAGATTTATAAGAAGGGT CCAGCGTTTGGAATGCCCGGCGTGCATGTTGATGGGATGGATGTCCTGAAGGTCAGGGAG GTGGCTAAGGAGGCCATTGAGAGGGCAAGGAGAGGTGAAGGACCGACTCTTGTGGAGTGT GAGACTTACCGGTTCAGAGGGCATTCTCTTGCTGATCCAGATGAGCTCAGGAGACCTGAT GAGAAATCTCATTACGCCGCAAGGGACCCCATTACAGCCTTGAAGAAGTACATCATCGAA CAGAACCTTGCAACTGAATCCGAGCTGAAGAGCATCGAGAAAAAGATCGATGATGTTGTT GAAGAGGCCGTGGAGTTCGCTGACGCAAGCCCGCTCCCTCCCCGGAGCCAGCTTCTGGAA AACGTGTTCTCAGATCCCAAGGGCTTTGGAATTGGCCCTGACGGGAAGTACCGGTGTGAG GATCCCTTGTTCACGCAAGGCACGGCCCAAGTCTGAGAGGCTCAACGAGCACGCTTATCA GTTATTATGTCATGCTTTTTCTTGTCTCTCTCTAGCTCTACCCTATCCTAGTTTTTGTCG AACCCATCGTCGTGTTAAGCGTAATGTAAGCACAACCTACTTCTTCATTTGTTTCATTCT TAGACCTCCCATATCAATATGCTCAACTGCTGCCCCAGTTTTTGCTCAGTGTGTTCGATT TGCTCTTCAGTAGTTCTATTGGTTTCAGAACAGCTGGGCCTGTAATCACTCACTCCTATG TCTGGACATGCAAAGATACTTCTGGTTTAGAGTTTCAGCTGAGTTACAGTGATT