Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0118400-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:1096578:1098615:1 gene:Os04g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongation factor EF-2 (Fragment). (Os04t0118400-01);Similar to H0613H07.5 protein. (Os04t0118400-02);Similar to H0613H07.5 protein. (Os04t0118400-03)
Sequence	CTTTGGGGTGAGAACTTCTTTGACCCGGCCACAAAGAAGTGGACCAACAAGAGCACTGGC TCAGCTACCTGCAAAAGAGGTTTCGTTCAGTTCTGTTATGAGCCAATCAAGCAAATCATC AACACTTGCATGAATGACCAGAAGGACAAGTTGTGGCCTATGCTGCAGAAGCTTGGTGTG GTCATGAAGGCTGATGAGAAGGATCTTATGGGCAAGGCTCTCATGAAGCGTGTTATGCAA ACTTGGCTGCCAGCCAGTAATGCACTTCTTGAGATGATGATATACCACCTTCCATCTCCT TCGAAGGCCCAGAAGTACCGTGTGGAGAATCTGTACGAGGGTCCTCTTGATGATGTCTAT GCAACTGCTATCAGGAACTGTGATCCGGAAGGTCCTCTCATGCTGTATGTTTCCAAGATG ATTCCAGCATCAGACAAAGGTAGATTCTTTGCCTTTGGCCGTGTCTTCTCTGGGAGGGTT GCAACTGGCATGAAGGTGCGTATTATGGGTCCCAACTATGTCCCTGGCCAGAAGAAGGAT CTGTATGTGAAGAGTGTCCAGCGTACTGTTATCTGGATGGGAAAGAAACAAGAGTCTGTT GAGGATGTTCCTTGTGGTAACACTGTCGCTATGGTCGGTCTGGATCAGTTCATCACAAAG AATGCCACCCTAACAAATGAGAAGGAAGCTGATGCCTGCCCAATCAGAGCAATGAAGTTC TCAGTGTCCCCAGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCATCTGATCTTCCCAAG CTTGTTGAAGGTTTAAAGCGTCTGGCAAAGTCTGATCCTATGGTCCTCTGTACCATTGAG GAGTCCGGTGAGCATATCATTGCTGGAGCTGGAGAGCTTCACCTTGAAATCTGCTTGAAG GATCTACAGGAAGACTTCATGGGTGGTGCTGAGATTATTGTTTCCCCTCCTGTTGTCTCC TTCCGTGAGACTGTTCTTGAGAAGTCCTGCCGTACAGTTATGAGCAAATCCCCAAACAAG CACAACCGTCTTTACATGGAAGCTCGCCCCTTGGAGGAGGGACTGGCCGAGGCCATCGAC GATGGACGTATTGGCCCACGTGACGATCCCAAGGTGCGGTCCAAGATCCTGTCTGAGGAG TTTGGGTGGGACAAGGACCTCGCCAAGAAGATTTGGTGCTTTGGACCTGAGACCACTGGC CCCAACATGGTGGTCGACATGTGTAAGGGAGTTCAGTATCTTAATGAAATCAAGGACTCT GTTGTGGCTGGGTTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAGGAGAACATGCGC GGCATCTGCTTCGAGGTATGTGATGTGGTTCTCCACGCTGATGCTATTCACAGGGGCGGT GGCCAGGTCATTCCGACAGCGAGGAGGGTCATCTATGCTTCTCAGCTCACCGCGAAGCCA AGGCTGCTGGAGCCAGTCTACCTGGTGGAGATCCAGGCCCCTGAGAATGCCCTTGGCGGT ATCTATGGCGTTCTGAACCAGAAGAGAGGCCATGTGTTCGAGGAGATGCAGAGGCCCGGT ACCCCGCTGTACAACATCAAGGCTTACCTCCCCGTCATCGAGTCGTTTGGGTTCTCGAGC CAGCTCCGTGCCGCAACATCGGGCCAGGCCTTCCCTCAGTGTGTCTTTGATCACTGGGAC ATGATGACTTCTGATCCTCTGGAGGTGAGCTCGCAGGCGAACCAGCTGGTGCTGGACATC CGCAAGAGGAAGGGTCTCAAGGAGCAGATGACCCCTCTCTCGGATTTCGAGGACAAGCTC TAA

Peptide Sequence

PEP ID	Os04t0118400-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:1096578:1098615:1 gene:Os04g0118400 transcript:Os04t0118400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongation factor EF-2 (Fragment). (Os04t0118400-01);Similar to H0613H07.5 protein. (Os04t0118400-02);Similar to H0613H07.5 protein. (Os04t0118400-03)
Sequence	LWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGV VMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQKYRVENLYEGPLDDVY ATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKD LYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEADACPIRAMKF SVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLK DLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAID DGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDS VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKP RLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSS QLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFEDKL

Transcript Sequence

Transcript ID	Os04t0118400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1096578:1098615:1 gene:Os04g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongation factor EF-2 (Fragment). (Os04t0118400-01);Similar to H0613H07.5 protein. (Os04t0118400-02);Similar to H0613H07.5 protein. (Os04t0118400-03)
Sequence	GCTTTGGGGTGAGAACTTCTTTGACCCGGCCACAAAGAAGTGGACCAACAAGAGCACTGG CTCAGCTACCTGCAAAAGAGGTTTCGTTCAGTTCTGTTATGAGCCAATCAAGCAAATCAT CAACACTTGCATGAATGACCAGAAGGACAAGTTGTGGCCTATGCTGCAGAAGCTTGGTGT GGTCATGAAGGCTGATGAGAAGGATCTTATGGGCAAGGCTCTCATGAAGCGTGTTATGCA AACTTGGCTGCCAGCCAGTAATGCACTTCTTGAGATGATGATATACCACCTTCCATCTCC TTCGAAGGCCCAGAAGTACCGTGTGGAGAATCTGTACGAGGGTCCTCTTGATGATGTCTA TGCAACTGCTATCAGGAACTGTGATCCGGAAGGTCCTCTCATGCTGTATGTTTCCAAGAT GATTCCAGCATCAGACAAAGGTAGATTCTTTGCCTTTGGCCGTGTCTTCTCTGGGAGGGT TGCAACTGGCATGAAGGTGCGTATTATGGGTCCCAACTATGTCCCTGGCCAGAAGAAGGA TCTGTATGTGAAGAGTGTCCAGCGTACTGTTATCTGGATGGGAAAGAAACAAGAGTCTGT TGAGGATGTTCCTTGTGGTAACACTGTCGCTATGGTCGGTCTGGATCAGTTCATCACAAA GAATGCCACCCTAACAAATGAGAAGGAAGCTGATGCCTGCCCAATCAGAGCAATGAAGTT CTCAGTGTCCCCAGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCATCTGATCTTCCCAA GCTTGTTGAAGGTTTAAAGCGTCTGGCAAAGTCTGATCCTATGGTCCTCTGTACCATTGA GGAGTCCGGTGAGCATATCATTGCTGGAGCTGGAGAGCTTCACCTTGAAATCTGCTTGAA GGATCTACAGGAAGACTTCATGGGTGGTGCTGAGATTATTGTTTCCCCTCCTGTTGTCTC CTTCCGTGAGACTGTTCTTGAGAAGTCCTGCCGTACAGTTATGAGCAAATCCCCAAACAA GCACAACCGTCTTTACATGGAAGCTCGCCCCTTGGAGGAGGGACTGGCCGAGGCCATCGA CGATGGACGTATTGGCCCACGTGACGATCCCAAGGTGCGGTCCAAGATCCTGTCTGAGGA GTTTGGGTGGGACAAGGACCTCGCCAAGAAGATTTGGTGCTTTGGACCTGAGACCACTGG CCCCAACATGGTGGTCGACATGTGTAAGGGAGTTCAGTATCTTAATGAAATCAAGGACTC TGTTGTGGCTGGGTTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAGGAGAACATGCG CGGCATCTGCTTCGAGGTATGTGATGTGGTTCTCCACGCTGATGCTATTCACAGGGGCGG TGGCCAGGTCATTCCGACAGCGAGGAGGGTCATCTATGCTTCTCAGCTCACCGCGAAGCC AAGGCTGCTGGAGCCAGTCTACCTGGTGGAGATCCAGGCCCCTGAGAATGCCCTTGGCGG TATCTATGGCGTTCTGAACCAGAAGAGAGGCCATGTGTTCGAGGAGATGCAGAGGCCCGG TACCCCGCTGTACAACATCAAGGCTTACCTCCCCGTCATCGAGTCGTTTGGGTTCTCGAG CCAGCTCCGTGCCGCAACATCGGGCCAGGCCTTCCCTCAGTGTGTCTTTGATCACTGGGA CATGATGACTTCTGATCCTCTGGAGGTGAGCTCGCAGGCGAACCAGCTGGTGCTGGACAT CCGCAAGAGGAAGGGTCTCAAGGAGCAGATGACCCCTCTCTCGGATTTCGAGGACAAGCT CTAAGAAAAAACCCTTTTGGTCTCGCATATGTTTTTGCCATTAATTTACCTGTTCTAATA GCTGTTCTACTATTGTTAAAGAGTTATAAGACAAGTCAGAAATATGATGTGTTTGTTACA CATCAAGTATCGGTGTTGGTAGTGTTGTGCTGTGGAACTATATATTTTGCTGTCTGGTGA TATGCAACAGATATGGAACTTTGATAATGTATCTGTTGATAGTTTTTACGGTTTTCTG