Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0117900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1054609:1070887:1 gene:Os04g0117900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amidase family protein. (Os04t0117900-01)
Sequence	ATGGCAGAAGACTTCGGCGCCTTCATGGAGAGGTTCGTGCTGCCGCCGCCGCCGCCGCCG TCGTCGCAGCAACTCCCCCTGCACGGCCTCACCTTCGCCATCAAGGACATCTTCGACATC GCCGGCCGCGTCACCGGGTTCGGCAACCCGGACTGGGCGAGGACCCACGCGCCCGCCGCC GCCACCTCCCCCGTCGTCCTCGCCGCGCTCGCCGCCGGCGCCACCAGCCTCGGCACCACC ATCATGGACGAGATGGCATACAGCATCTATGGCGAGAACGCGCACTACGGCACGCCGGCC AACCCGTGCGCCCCCGGCAGAGTCCCCGGCGGATCCTCCAGTGGCTCCGCCGTCGCCGTC GCCGCCAACCTCGTCGACTTCTCCCTCGGCACCGACACCGGCGGCAGCGTCAGGGTGCCC GCTGCCTACTGCGGCATCTTCGGCCTCCGCACCTCCCATGGCCTCGTTTCCGCTCAAAAC GTCATCCCCATGGCACAAATGTTTGATACTGTTGGTTGGTTTGCCAGAGATCTATCTACG TTGTCTCGTGTAACCAAAGTGTTGTTGCCACTTCCTGATGACACTGTCAAGCACCCAACT CATGTCACAATTCCCATGGACTGTTTCCAAATCTTAGGGTCTCCTGATGACCATACATAT CAAATCGTCAATGCTTCAGTAGCCAAGAAATTTGGTAGTCACGCAATAGACAATGCCAAC CTTGGAGACTTCGTCTCTGACAATGTTCCAAGCATAGGGAAGTTCATTGCTGACTTCTCT GAAAGCGAACTACCTTCCGTGCCAGCTCTCTCTGTCATTTCACATGTCATGTTCAGCCTT CTGAGGTCTCAGTTCAAAGCAAACCATGCAGAGTGGGTTAACTCTGTAAAACCTAACCTA GGCCCTGGATTACGAGAGAACATACATGGGGCCGTTGCATCAGGGGATGATGAACCCCTG GAGGAATTTCTAGCCGTAAGGGCCGAATTCAAGTCTGCACTTGCTGCTCTTCTCAAGGAT CATGGAATCCTTGCGATTCCTACGGTTCCTGGCCCTCCACCAATGGTGGGCATTCAGGCG CAGGCTGCTCCTCTGGATAATTACCAAGCAAGAGCATTTTCCCTTCTCGACATCGCTGTA GTATCCGGGTTTTGCCAGGTGAGTATTCCACTGGGCAAGCGCAATGGTCTTCCTGTGTCA GTTTCGCTGGTGGCACGACATGGCGCAGACCATTTCCTCCTCAATGTGGCTGAGGAGCTG TACCAGACGCTCATAGACGAAGCCGCTAAAGCTTGGGCCTCCTGA

Peptide Sequence

PEP ID	Os04t0117900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1054609:1070887:1 gene:Os04g0117900 transcript:Os04t0117900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amidase family protein. (Os04t0117900-01)
Sequence	MAEDFGAFMERFVLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAA ATSPVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAVAV AANLVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDLST LSRVTKVLLPLPDDTVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDNAN LGDFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKPNL GPGLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLKDHGILAIPTVPGPPPMVGIQA QAAPLDNYQARAFSLLDIAVVSGFCQVSIPLGKRNGLPVSVSLVARHGADHFLLNVAEEL YQTLIDEAAKAWAS

Transcript Sequence

Transcript ID	Os04t0117900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1054609:1070887:1 gene:Os04g0117900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amidase family protein. (Os04t0117900-01)
Sequence	AAGTGATCGAAGCGGTAGCCGCCGAGTGAGAGTGACGCGTCGCGACGCCATGGCAGAAGA CTTCGGCGCCTTCATGGAGAGGTTCGTGCTGCCGCCGCCGCCGCCGCCGTCGTCGCAGCA ACTCCCCCTGCACGGCCTCACCTTCGCCATCAAGGACATCTTCGACATCGCCGGCCGCGT CACCGGGTTCGGCAACCCGGACTGGGCGAGGACCCACGCGCCCGCCGCCGCCACCTCCCC CGTCGTCCTCGCCGCGCTCGCCGCCGGCGCCACCAGCCTCGGCACCACCATCATGGACGA GATGGCATACAGCATCTATGGCGAGAACGCGCACTACGGCACGCCGGCCAACCCGTGCGC CCCCGGCAGAGTCCCCGGCGGATCCTCCAGTGGCTCCGCCGTCGCCGTCGCCGCCAACCT CGTCGACTTCTCCCTCGGCACCGACACCGGCGGCAGCGTCAGGGTGCCCGCTGCCTACTG CGGCATCTTCGGCCTCCGCACCTCCCATGGCCTCGTTTCCGCTCAAAACGTCATCCCCAT GGCACAAATGTTTGATACTGTTGGTTGGTTTGCCAGAGATCTATCTACGTTGTCTCGTGT AACCAAAGTGTTGTTGCCACTTCCTGATGACACTGTCAAGCACCCAACTCATGTCACAAT TCCCATGGACTGTTTCCAAATCTTAGGGTCTCCTGATGACCATACATATCAAATCGTCAA TGCTTCAGTAGCCAAGAAATTTGGTAGTCACGCAATAGACAATGCCAACCTTGGAGACTT CGTCTCTGACAATGTTCCAAGCATAGGGAAGTTCATTGCTGACTTCTCTGAAAGCGAACT ACCTTCCGTGCCAGCTCTCTCTGTCATTTCACATGTCATGTTCAGCCTTCTGAGGTCTCA GTTCAAAGCAAACCATGCAGAGTGGGTTAACTCTGTAAAACCTAACCTAGGCCCTGGATT ACGAGAGAACATACATGGGGCCGTTGCATCAGGGGATGATGAACCCCTGGAGGAATTTCT AGCCGTAAGGGCCGAATTCAAGTCTGCACTTGCTGCTCTTCTCAAGGATCATGGAATCCT TGCGATTCCTACGGTTCCTGGCCCTCCACCAATGGTGGGCATTCAGGCGCAGGCTGCTCC TCTGGATAATTACCAAGCAAGAGCATTTTCCCTTCTCGACATCGCTGTAGTATCCGGGTT TTGCCAGGTGAGTATTCCACTGGGCAAGCGCAATGGTCTTCCTGTGTCAGTTTCGCTGGT GGCACGACATGGCGCAGACCATTTCCTCCTCAATGTGGCTGAGGAGCTGTACCAGACGCT CATAGACGAAGCCGCTAAAGCTTGGGCCTCCTGAATCCTCCAGCCCGATTTCATCTGTAT ATACCTACTAATACAAAGTCTAAACACGTATTATATTGCATATATGGAATAATGGAAATG GGGTGATACAATCCACCCAATGTAAACTTGCATATGCATATATACATGAACTAGCTGATA CCTCGCACTTTGCTGCGAAATACGTGGATGAATGTATGTTATACATCAGATAAATGTATA TGTTTAAATAATGTGAAAATGATGTGGAGATTAAAATACTCCACATAATAGTTGCTAGTG AGTCATATAATTTAAAATATTTTAGATAATAATTGCTAGTGGATGATGATGTGACACACT TGCACGTTAAGTTTTAGACAATGTTATTTGGATT