Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0117200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:1015435:1019694:-1 gene:Os04g0117200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os04t0117200-01)
Sequence	ATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGAC AGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTG CGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTC GTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAG CAGGCGAGGAAGGCGGACGCCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTT ATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAAT GATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAG GAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCAC ATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACT TTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGG AACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAG GCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGAT CAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAAC ATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTG GAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATC AACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAAT TTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCAGACAGCATGCATCAAGTTCA AAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAG TCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGT TCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCC CCAATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAG

Peptide Sequence

PEP ID	Os04t0117200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:1015435:1019694:-1 gene:Os04g0117200 transcript:Os04t0117200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os04t0117200-01)
Sequence	MAGGGGGRGRGARVAAPAGDSGKGAQAEWLRIYDGIVAMLRKTQAQVEELVAERDHLAAF VKIQHDFMVSRVGRLQSSLQQARKADAIRKRYEAANMEILIGDKEREARSYQKIAELTEN DLEDFRTSIAALAAENYELKEKLKEVERHAELAENTVDHHIHSPRDLRAELKKLKHAYKT LSSEKEKEVSALRAENDFVWNQLRTMENDYTDLLKKKKIEAAQATEAAQKLQKNLEELQD QNKGNEIGRLQAEAVDAKMNISILEDKLQEMLSLVKEKDLEIEQLKHGQPMTSQINKKDI NQKNRKCRSQDPPSRDKSTNLQATPPGRKVKISRQHASSSKQKQVQSRNNSRRQKLEGDK SEVGEKRKRALPSSSGLQRCSARQQAKSSASPVVQPLLFSPIFRVPKVKTPTPP

Transcript Sequence

Transcript ID	Os04t0117200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:1015435:1019694:-1 gene:Os04g0117200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os04t0117200-01)
Sequence	AAATCCCCAATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATC CATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGG GGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGA TGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGG CCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCC TGCAGCAGGCGAGGAAGGCGGACGCCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGA TCCTTATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGG AGAATGATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAAC TGAAGGAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATC ACCACATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACA AGACTTTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTG TGTGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAA TAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGC AAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAA TGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAG ACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGG ATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAA CAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCAGACAGCATGCATCAA GTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTG ATAAGTCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAAC GATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCT TCTCCCCAATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAG TCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACT TGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCA GGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCAT ACTTGACGCAGCTCTTGAACAAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTT CTTCATCTTTTCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGA GAAATTTGTCGATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAAT TTTTTTTCCATTGTTCGATGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTG TATATATGTAATGTACGTATCTCGTACATCGTTAACAACATCCAT