Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0111900-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:681115:687685:-1 gene:Os04g0111900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC22 description:Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)
Sequence	ATGGCTCTCCCCTCGCGTCGGTGGGCAGGGGCGGTGGAATCCGGCGTGGATCCGGTGGCG GAGGCTTGGGCGAAGCTGCTGCGGTCGCTTTCCCAGGCCATGGCGCGGCTGAGGGTGCAG ATGGAGTCGTTCGACGATGCCCAGATGAGGTGGGCGCTGGCCGCCGGTGTCCGAGCCAAG GCGCAGCTGCTGGCTAGCCGCCTGGCTCAGATCCTCGCCCTCTTCTGGGACGAGGGGCAG CGCGCGGCGCTCCCGGCCTGCGTGCGGGATGCCCTGTACGGCATGGAAGACATGGTCGAC GATTTGGAGTACCACATGCTCAAGTTCCAGCCTCATCAACAAGAGGTCAGATGCAATCTG CTCATCTCTCTTGTCAATCTCCGCTACCGGCTCATCATCAGCCACGCGTCTCGCTCCCGC TTCCTCAAGGATTTGGATTTCGTTGCGAGCGAGGCAGGCAGCCTCCTCTCCGCGATGCAT AAGCTCGAGCCCACCGCTCCGTCGCTCCCTGCCCTGCTGCTTGCTGACGACGATCATCAG GTTGTGTTTGGGCGCCACAAGGAGGTCACTGACATTGTTCGAATACTCATTGATCCGCCG GCAAGCCACCACCACCACCCTACTTACGACATCCTCCCAATCGTTGGCATGGGGGGCGTG GGGAAGACCACACTCGCCAAGTTAGTCTATGATGATGCCAAGGTTAAGCAGCATTTCGAG CTCAGGCTCTGGGCGAGTGTCTCTACTAGTGGAGGGTTTCACAAAATTGACATCACCGAA CAAATCTTGCGTTCAGCCAACCCAACATACCCTGCTTCTATTCACAGTGAACCTACGCTT GACATGCTTCAGTTCCATCTCAGCCAACTGGTAGCGTCCAAGAGATTCTTGCTTGTTCTC GATGACATCAGGGAGGAGTCCTTCACCAGCATGGCCTGCCAAGAGATCCTCAGTCCTCTA TCATCGGCAGAAAAGGGGAGCAGAATTCTGGTGACTACTACAACAGCCTCAGTGCCTGCC ATGCTGGGGGCATCTTGTACATACCACCTGAATGTATTGGACATCGAGGATTTGTGGTCC TTGCTCAAGAAATATGCTTTCCATGGAGGCCCAACTCATGATTCCACCCAGGAGCTTGAA GAAATTGGGAGGAACATCGCATCCAAGCTCAAAGGATTGCCATTGGCTGCCAAGATGCTT GGGGGGCTGCTTGGAGCTACAAAGAGCACAAAGACCTGGATGAATGTCTTGGACAAAGAA CTTTATGGCGATAGTATTCTTCCCGTACTAGAATTGAGTTACAGTTACCTGCCTCGACGA CTCAAGCAGTGCTTTTCGTTCTGCAGTTTGTTTCCGAGGAACTATAAATTTAACAAAAGA GTGTTGATCCAACTTTGGATGGCCCAAGGTTTTGTTCAGTCACAGAACAGTGCTGACAAA AATATGGAGGACCTGGCAGAAGATTATTTTGAGGAACTTCTTTCGCGATCCTTCTTTGAT GTACGCAGGGAAGCGTGTGAAACACACTACGTGATGCATGACCTTGTCCATGACCTCGCG CAGTCTGTTTCGGCAGATCAATGCCTTCGTGTTGAGCATGGCATGATTTCTGAGAAGCCA TCAACTGCTCGCTATGTATCTGTCACCCAAGATGGACTACAAGGCCTTGGGAGCTTCTGC AAACCTGAAAATTTGCGTACCTTGATAGTTCTAAGATCATTTATATTCTCCTCAAGTTGC TTCCAAGATGAATTCTTCAGGAAGATAAGGAACTTGCGTGTCTTAGACCTTAGTTGCTCT AACTTTGTACAGTTGCCTAACTCGATTGGTGAACTAGTGCACCTGCGTTACCTATCTCTC CCTCGCACCCTCAATATGCTTCCTGAGTCAGTCAGCAAGCTACTGCACCTCGAATCATTG TGCTTTCACAAGTGTTCCCTTGAAAAGCTTCCCGCAGGCATAACTATGCTGGTCAACTTG CGGCACCTTAACATTGCCACAAGGTTCATTGCACAGGTGTCCGGCATTGGGCGGCTTGTA AACCTTCAGGGATCAGTTGAATTCCATGTTAAAAAGGGGGTAGGATGTACCTTGGAAGAG CTGAAGGGCTTAAAAGATCTCCGTGGGAAACTAAAAATAAAGGGCCTTGATAATGTTTTA AGCAAAGAAGCAGCCAGCAAAGCCGAGTTGTACAAGAAACGACATCTTAGGGAGCTCAGT CTGGAATGGAACTCTGCAAGTAGAAATCTAGTCCTTGATGCAGATGCTATAATATTAGAA AACCTACAGCCACCCTCTAGCTTAGAAGTACTCAATATCAATAGGTACCAAGGTGCCATA TGCCCTAGTTGGCTGCAGTTATCATCACTTAAGCAGCTTCAATCCTTGGACCTTATTAAC TGCAGGAATTTGGAGATCCTACCTCCATTGGGACTATTACCGTCACTCAAATATCTATGT ATGAAGGAACTGTGCACTGTTAATCAAATTGGACATGAGTTCTACGGCGATGATGATGTA CCATTTCCATCCCTGATAATGCTTGTTTTCGATGATTTTCCAAGTTTATTTGATTGGTCT GGTGAAGTGAAAGGCAATCCGTTTCCCCATCTCCAAAAGCTAACACTTATAGACTGTCCA AATTTGGTTCAGGTTCCTCCATTGCCCCCTTCTGTCAGTGATGTTACAATGGAGCGTACA GCATTGATATCCTATTTGAGGCTTGCCAGATTGTCTTCGCCAAGGTCAGATATGCTCACG CTTGATGTTCGTAATATTAGTATACTTTGCTGGGGACTGTTCCATCAGTTACATTTGGAA TCTGTCATATCTTTAAAAATAGAAGGTCGTGAGACACCTTTTGCCACCAAAGGATTGTGT TCGTTTACTTCTCTTCAAAGGCTTCAGTTATGTCAATTTGACTTAACAGACAATACGTTA AGTGGAACTCTCTACGCGCTTCCTTCGCTATGCTCCTTGGAGATGATCGATCTGCCCAAT ATAACATCCCTTTCAGTTCCATCAGACATTGATTTCTTCCCGAAACTTGCTGAATTGTAC ATATGCAACTGTCTGTTGTTTGCTTCCCTTGATTCCTTGCACATTTTCATTTCCCTAAAG CGATTGGTGATCGAGAGATGCCCCAAACTGACAGCAGGATCCTTCCCAGCAAACTTTAAG AACCTCACATCTCTCAAGGTACTAAGCATATCACACTGCAAGGATTTCCAATCTTTTCCT GTGGGTAGTGTACCACCGTCACTGGAAGCACTTCATCTCGTTGGTTGCCACCAAAGTTAA

Peptide Sequence

PEP ID	Os04t0111900-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:681115:687685:-1 gene:Os04g0111900 transcript:Os04t0111900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC22 description:Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)
Sequence	MALPSRRWAGAVESGVDPVAEAWAKLLRSLSQAMARLRVQMESFDDAQMRWALAAGVRAK AQLLASRLAQILALFWDEGQRAALPACVRDALYGMEDMVDDLEYHMLKFQPHQQEVRCNL LISLVNLRYRLIISHASRSRFLKDLDFVASEAGSLLSAMHKLEPTAPSLPALLLADDDHQ VVFGRHKEVTDIVRILIDPPASHHHHPTYDILPIVGMGGVGKTTLAKLVYDDAKVKQHFE LRLWASVSTSGGFHKIDITEQILRSANPTYPASIHSEPTLDMLQFHLSQLVASKRFLLVL DDIREESFTSMACQEILSPLSSAEKGSRILVTTTTASVPAMLGASCTYHLNVLDIEDLWS LLKKYAFHGGPTHDSTQELEEIGRNIASKLKGLPLAAKMLGGLLGATKSTKTWMNVLDKE LYGDSILPVLELSYSYLPRRLKQCFSFCSLFPRNYKFNKRVLIQLWMAQGFVQSQNSADK NMEDLAEDYFEELLSRSFFDVRREACETHYVMHDLVHDLAQSVSADQCLRVEHGMISEKP STARYVSVTQDGLQGLGSFCKPENLRTLIVLRSFIFSSSCFQDEFFRKIRNLRVLDLSCS NFVQLPNSIGELVHLRYLSLPRTLNMLPESVSKLLHLESLCFHKCSLEKLPAGITMLVNL RHLNIATRFIAQVSGIGRLVNLQGSVEFHVKKGVGCTLEELKGLKDLRGKLKIKGLDNVL SKEAASKAELYKKRHLRELSLEWNSASRNLVLDADAIILENLQPPSSLEVLNINRYQGAI CPSWLQLSSLKQLQSLDLINCRNLEILPPLGLLPSLKYLCMKELCTVNQIGHEFYGDDDV PFPSLIMLVFDDFPSLFDWSGEVKGNPFPHLQKLTLIDCPNLVQVPPLPPSVSDVTMERT ALISYLRLARLSSPRSDMLTLDVRNISILCWGLFHQLHLESVISLKIEGRETPFATKGLC SFTSLQRLQLCQFDLTDNTLSGTLYALPSLCSLEMIDLPNITSLSVPSDIDFFPKLAELY ICNCLLFASLDSLHIFISLKRLVIERCPKLTAGSFPANFKNLTSLKVLSISHCKDFQSFP VGSVPPSLEALHLVGCHQS

Transcript Sequence

Transcript ID	Os04t0111900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:681115:687685:-1 gene:Os04g0111900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC22 description:Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)
Sequence	GGGGAAAGTTGTTGCGCACAGCACACATTCTCTTTCTGAAACGCTCGAAATCCCCCAAAA ATTGGCCCCCCTCGCTCGTAGTCCGGCGTCCGGCGATGGCTCTCCCCTCGCGTCGGTGGG CAGGGGCGGTGGAATCCGGCGTGGATCCGGTGGCGGAGGCTTGGGCGAAGCTGCTGCGGT CGCTTTCCCAGGCCATGGCGCGGCTGAGGGTGCAGATGGAGTCGTTCGACGATGCCCAGA TGAGGTGGGCGCTGGCCGCCGGTGTCCGAGCCAAGGCGCAGCTGCTGGCTAGCCGCCTGG CTCAGATCCTCGCCCTCTTCTGGGACGAGGGGCAGCGCGCGGCGCTCCCGGCCTGCGTGC GGGATGCCCTGTACGGCATGGAAGACATGGTCGACGATTTGGAGTACCACATGCTCAAGT TCCAGCCTCATCAACAAGAGGTCAGATGCAATCTGCTCATCTCTCTTGTCAATCTCCGCT ACCGGCTCATCATCAGCCACGCGTCTCGCTCCCGCTTCCTCAAGGATTTGGATTTCGTTG CGAGCGAGGCAGGCAGCCTCCTCTCCGCGATGCATAAGCTCGAGCCCACCGCTCCGTCGC TCCCTGCCCTGCTGCTTGCTGACGACGATCATCAGGTTGTGTTTGGGCGCCACAAGGAGG TCACTGACATTGTTCGAATACTCATTGATCCGCCGGCAAGCCACCACCACCACCCTACTT ACGACATCCTCCCAATCGTTGGCATGGGGGGCGTGGGGAAGACCACACTCGCCAAGTTAG TCTATGATGATGCCAAGGTTAAGCAGCATTTCGAGCTCAGGCTCTGGGCGAGTGTCTCTA CTAGTGGAGGGTTTCACAAAATTGACATCACCGAACAAATCTTGCGTTCAGCCAACCCAA CATACCCTGCTTCTATTCACAGTGAACCTACGCTTGACATGCTTCAGTTCCATCTCAGCC AACTGGTAGCGTCCAAGAGATTCTTGCTTGTTCTCGATGACATCAGGGAGGAGTCCTTCA CCAGCATGGCCTGCCAAGAGATCCTCAGTCCTCTATCATCGGCAGAAAAGGGGAGCAGAA TTCTGGTGACTACTACAACAGCCTCAGTGCCTGCCATGCTGGGGGCATCTTGTACATACC ACCTGAATGTATTGGACATCGAGGATTTGTGGTCCTTGCTCAAGAAATATGCTTTCCATG GAGGCCCAACTCATGATTCCACCCAGGAGCTTGAAGAAATTGGGAGGAACATCGCATCCA AGCTCAAAGGATTGCCATTGGCTGCCAAGATGCTTGGGGGGCTGCTTGGAGCTACAAAGA GCACAAAGACCTGGATGAATGTCTTGGACAAAGAACTTTATGGCGATAGTATTCTTCCCG TACTAGAATTGAGTTACAGTTACCTGCCTCGACGACTCAAGCAGTGCTTTTCGTTCTGCA GTTTGTTTCCGAGGAACTATAAATTTAACAAAAGAGTGTTGATCCAACTTTGGATGGCCC AAGGTTTTGTTCAGTCACAGAACAGTGCTGACAAAAATATGGAGGACCTGGCAGAAGATT ATTTTGAGGAACTTCTTTCGCGATCCTTCTTTGATGTACGCAGGGAAGCGTGTGAAACAC ACTACGTGATGCATGACCTTGTCCATGACCTCGCGCAGTCTGTTTCGGCAGATCAATGCC TTCGTGTTGAGCATGGCATGATTTCTGAGAAGCCATCAACTGCTCGCTATGTATCTGTCA CCCAAGATGGACTACAAGGCCTTGGGAGCTTCTGCAAACCTGAAAATTTGCGTACCTTGA TAGTTCTAAGATCATTTATATTCTCCTCAAGTTGCTTCCAAGATGAATTCTTCAGGAAGA TAAGGAACTTGCGTGTCTTAGACCTTAGTTGCTCTAACTTTGTACAGTTGCCTAACTCGA TTGGTGAACTAGTGCACCTGCGTTACCTATCTCTCCCTCGCACCCTCAATATGCTTCCTG AGTCAGTCAGCAAGCTACTGCACCTCGAATCATTGTGCTTTCACAAGTGTTCCCTTGAAA AGCTTCCCGCAGGCATAACTATGCTGGTCAACTTGCGGCACCTTAACATTGCCACAAGGT TCATTGCACAGGTGTCCGGCATTGGGCGGCTTGTAAACCTTCAGGGATCAGTTGAATTCC ATGTTAAAAAGGGGGTAGGATGTACCTTGGAAGAGCTGAAGGGCTTAAAAGATCTCCGTG GGAAACTAAAAATAAAGGGCCTTGATAATGTTTTAAGCAAAGAAGCAGCCAGCAAAGCCG AGTTGTACAAGAAACGACATCTTAGGGAGCTCAGTCTGGAATGGAACTCTGCAAGTAGAA ATCTAGTCCTTGATGCAGATGCTATAATATTAGAAAACCTACAGCCACCCTCTAGCTTAG AAGTACTCAATATCAATAGGTACCAAGGTGCCATATGCCCTAGTTGGCTGCAGTTATCAT CACTTAAGCAGCTTCAATCCTTGGACCTTATTAACTGCAGGAATTTGGAGATCCTACCTC CATTGGGACTATTACCGTCACTCAAATATCTATGTATGAAGGAACTGTGCACTGTTAATC AAATTGGACATGAGTTCTACGGCGATGATGATGTACCATTTCCATCCCTGATAATGCTTG TTTTCGATGATTTTCCAAGTTTATTTGATTGGTCTGGTGAAGTGAAAGGCAATCCGTTTC CCCATCTCCAAAAGCTAACACTTATAGACTGTCCAAATTTGGTTCAGGTTCCTCCATTGC CCCCTTCTGTCAGTGATGTTACAATGGAGCGTACAGCATTGATATCCTATTTGAGGCTTG CCAGATTGTCTTCGCCAAGGTCAGATATGCTCACGCTTGATGTTCGTAATATTAGTATAC TTTGCTGGGGACTGTTCCATCAGTTACATTTGGAATCTGTCATATCTTTAAAAATAGAAG GTCGTGAGACACCTTTTGCCACCAAAGGATTGTGTTCGTTTACTTCTCTTCAAAGGCTTC AGTTATGTCAATTTGACTTAACAGACAATACGTTAAGTGGAACTCTCTACGCGCTTCCTT CGCTATGCTCCTTGGAGATGATCGATCTGCCCAATATAACATCCCTTTCAGTTCCATCAG ACATTGATTTCTTCCCGAAACTTGCTGAATTGTACATATGCAACTGTCTGTTGTTTGCTT CCCTTGATTCCTTGCACATTTTCATTTCCCTAAAGCGATTGGTGATCGAGAGATGCCCCA AACTGACAGCAGGATCCTTCCCAGCAAACTTTAAGAACCTCACATCTCTCAAGGTACTAA GCATATCACACTGCAAGGATTTCCAATCTTTTCCTGTGGGTAGTGTACCACCGTCACTGG AAGCACTTCATCTCGTTGGTTGCCACCAAAGTTAACTGACAATGTGGTGTCAAGAAAAAT GCTCCTTAACACACCAAAGCTCACTGATGGACCATGAAGAACATAAACAAAAAAAAATCT TGACAACGGATAGCAGGTTACACAAATAATGTTGCATGGAGAAATCAAGTGACGGCTCGC AAGTAGTAGGAGAGGACGAGCGGTAGTGCATATGACGTCGACCTTGCCAAGTAACTTCAG GCTCATCCCTTGGAGACATGAGAGATGAGCGACCATACAATACAAGGCCAATGTATTCTG ATCTGTTTAGGATCTCTTCATCACCTCGTCTCTTTATATTTCTTTGTTAAGCCAGGGTTG GACGGCCATCTCCTTGCTAGGCTGAAGAAACAATGGAACACATCCTAGTCTCTGTTTTTA GCCTTCAGAATTGAAAGTTGATCCTATAGAGGTTAGGCTTCTCTTCCATCTCCCCAACTC TTGACACAAACAACTTCTCCAGTTGCTGGTCTAGGGCTTTGAAGGGCACAAGAAAGTAGG ATAAGAAAGGATTTAACTCGCTTAATTTGTTTTGGAAATCTAGAAGCAATGGGAGCGATT GCATGTTTAATGGTGCAAATCCTAGTGTGCTGGCTGTAATTCAAGGCGCCTTATGGTGCT TGGCTGGTGCTTCTGAGCTCCGTGGGGGTGCTCGAATCTCGATAGGTCGTTAGCCCGTAT GGTTTAAGGGGTAGTTTATTTTTGAATTTTTTTTAAAGGGAAGTCTATATGGGATTTGGA TGATATTTTAGGCTTCAATCATGCAGATTTTAAATCCAATTGGATGCTCTTTCACCAAGT AGATCGAAAATGTTTCACCAAGTAGATCGAAAATGTTTTAATCTTTTAAAAAACTGAAAC ACAATCAAATCATCTTATGAAACATTTTGCTATAACATATGTAACAACGGTTCTCAATAT ACTAAAACATGAATGATTTAGCTATCAAAAATCATTCAAATCATTCGACAGCTATTTAAC CTTCCATAGGATGGGGGATTTTCTAATTCCCCATCCATTTGTATCTCTCTCTTGCTTAAT GAAATATGTGTAGATCACCTACGTGTTCAAGAAAATGATGCAAAGGAAAGGGCCGTTAGT TCAGATATAGGCAAATTATTATGCTTGTGCTTGATTCCAAATACTCTGTCCGTTTCAAAA TTATATTCTTGTCCTTTCTTGTTTTTGGTGCCTTAACTTCATCTTTATTTTTATTAGAAA ATAACATCCTCTAAGAGCAAGGATAATAATAGAGCCCACTTCCTACTATTAGCTCATTTT AAAGCCAACATATATAATAGATTAGCTATAAGATTGGCTACAATTTTCTTCTCATCTCTC TATCTCTCAGTTATACATTTAATGCATTTGTCTTAGAGCTTGTGATAAGCTAGCTGAGAG CCAACATCCTTAATTTTTCACTACATCTCTCCGCCACCTAAGGTTATAATAGGCTTATAG CTCACTATTATACTTGCTCTAAGTAGGAGATAAAGGGCATCGATACGGTGTCAAAAGGTA CGCATGTACATGCCTTTGGAATTTAGGTGGGCAGCACCGGACGCGATTGCGTGGAAATCT AATAGCCTACGACGGTGGACCGGTCGGTTTAAATGATAGTTGATGGTCAGATTTTTTTTT TAGAATTTCGAGGATTTCTCTGATTTTAGAAGGTATCATGTGATGGTGTACGAGTGTTTT TTAGGAAATGTACTGAACTTTTAGTTTATAATAGTATTGTCGAAACGACAACCGCATACG TCGAAAGACGTGGTTACTCAACAGTGGTTGG