Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0110300-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:602300:608876:1 gene:Os04g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein CHB704 description:Similar to H0201G08.8 protein. (Os04t0110300-01);Myb, DNA-binding domain containing protein. (Os04t0110300-02)
Sequence	ATGGAGCCCAATCCCCCGCCGCCGCCCGCCGCCGCCACCGCAACCTACCGCCGCCGCGGC AAGCCCAAGCCCAAACCCAAGCGCAAGGCAGCCAAGCCCCCCTCGCCGTCCCCGCCGCCC AAGCGCCAGGCCCGGGACGACCCCCCGCACACGGGGCCACTCACCCGCCACTCGCCGCTC AACCCTGCGCCGGAGGATGCACCGCCCCAGCTCCACGCCGGGGAGCGCGACCCGCCTCCG CGCGCCTGGATAGAGCCCGCAAAGCTTCCGCCGGTGAGCGAGGAAGTCCAGGCCGTCCTG TCGCGCGGAGCCGGCGTCCACGTCGTCCCCTCCTTCGCAGGATGGTTTTCATGGAAGGAA ATCCACCAAATTGAAAAGCAAGCATTGCCTTCGTTTTTTGATGGGATATCTTTACGGAGG ACACCTGAGATATATTTGGGAATTAGAAATTTTATTATGAAGAAATTTCATTCTAATCCT CAAATGCATTTGGAGTTGAAGGATTTGTCTGAGTTGTCAGATGGGGAGATGGATGCTCAG TTGAAAGTCTTGGAGTTCTTGTCACACTGGGGTTTGATCAATTTCCACCCTTTTCCACCA GCTGTACAGGGGGTGAGTGAGCTGGTTGAGAGCATAACAAATGCTGATACAGAAGAGAAA ATTTCTGTAGTGGATAAATTATTTCAGTTTGAAACATTGCAGTCATATCTCATTCCTGCT CCTAACCAAGCAGAGGTGACAGCTCCGATTCACACCCCGAGCTTGCTTTCTGAGCCTACT CTAACTGAAGATTCGATTACCCAAGCTGAGTCTTCTGTTGAGTACCACTGCAACTCTTGC TCAGTTGATTGCTCAAGGAAGCGCTACCATTGCAGAACTCAGGCAGACTTTGACTTGTGT TGTGACTGTTATGACAAAGGAAATTTGGATGCAGGCATGTCACAAACTGATTTCATCATT ATGGAATCTGCAGAAATTCCAGGCTTTGGTGGTACTAGCTGGACTGACCAGGAGACCTTG CTTCTTTTGGAAGCTTTAGAAATTTTCCAAGCAAAATGGGGTGACATTGCCGAGCATGTT GCTACAAAAAGCAAAGCACAATGCATGCTACACTTCCTTAAAATGCCAATTATGGACCCA TTTCTGCATGATGGAGATGTTAATGAAATATCTCAGGAAACTGCAGAGCAGGTCTCAGCA GAACAAGGTACTTCTCGTGTAACTGAGAAAATGGAAGTAGAAGACAAAACAAAAGAAATA AAAACTAATGATAGAAAAACTGCTGCAAAACCAAAATTGAACTTGACAGAAACAGAAGTA AACCTAGACGACAATGTTGTTGCAAATAATGATACCAAGAGTTCAGGTGATATCAATGTG GATGTATGTAGCAATACTGGTGTATCAAATAGATCTTCAGATACCGAACCTACAAAGAAG GAAACTTCTGGGGAAAACACATCAAACATTGTTAATGATGTCCTGAAATATGCTTTTGAG GCTGTTGGTCACATTCCAAAGATAGAGGGCTTGGGTTCATTTACTGAAGCAGGAAATCCT GTCATGGCACTGGTGGCATTTCTATCTGGCCTTGTGGATCATGACGATGTTACTACGTTG TGCTGTAGTTCACTGAAAGCTATATCTGATATGTCTCCTGCTCTTCAACTGGCAACAATG CATTGTTTTATTCTTCAGGATCCACCAAATGACCTCAAAGATCCACCGGTCAGTATAAGC TTTGCAAACACAGATTGTGGGCAACAAAAAGACAAGGATGCTACTTCAAATCCAAGTGTT ACTGACAATGATGACAATTTAAAAGAAGAGTCTGCTTTATCTGTGGAAGAGCCAAATACC ACATCCACATCATCGAAAAACACCAGGAAATTATCTAATGCGAAGGAATCTAAGGATGAA TCTCCCCAAGTGGAGCCCAAACCCAGTAGTGCCAACGATTGTGACAATCCAATTTCTCAG GTGGCAAAGAGGGCTTCTGATAATATAAGAGGACACAGTTCCACTGTGCTTCCTGTCAGT CTGAATAATACAAATGAACCTTGTTCCATATCTTCCCAAGAGGCTAGTGCAGGAAACACA AAGGATACAAGTCATACAGAACACATAGAAGGAGATAAACCAATTTATGAGGATCCACCA TTAGAAGGAAAGGTAGAGTTGAACAAGATCGAACATGAAGTCACTGACTTATCTGCTGTA CAGCAACATGAGTCCATCCAAACAAGTTTGAAGAAGGGCTACATACAAGATCATAACAGT ATTAAGAAAACAGTTGCCGATGATGTCTCCGTACAAAGGCTACAGCGGGCAGCAGCCAGT GCTATTTCAGCAGCTGCTGTGAAGTCGAAACTCCTTGCAAAGCATGAGGAATATCAAATC CAGCGACTAGCTGCACTTGTGATTGATAAACAGCTCCACAAGATGCAAGCGAAAATGTCA GTTTTCACTGAAGCAGATAATTTGGTCCTGCGAGCGAGAGAACACACCGAGAGAACTCGG AAGAAGCTTCTGATGGAGAGGAGCGCGATAATCGCTTCTCGGATGGCGGCATTGCCACCC AGACCAAACCACCAACCTGGGATGCCTGGGAGCAGATTGCCGGTAGGGTATGGTGTGAAT CAGCATCTGAGGCGATCTTGA

Peptide Sequence

PEP ID	Os04t0110300-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:602300:608876:1 gene:Os04g0110300 transcript:Os04t0110300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein CHB704 description:Similar to H0201G08.8 protein. (Os04t0110300-01);Myb, DNA-binding domain containing protein. (Os04t0110300-02)
Sequence	MEPNPPPPPAAATATYRRRGKPKPKPKRKAAKPPSPSPPPKRQARDDPPHTGPLTRHSPL NPAPEDAPPQLHAGERDPPPRAWIEPAKLPPVSEEVQAVLSRGAGVHVVPSFAGWFSWKE IHQIEKQALPSFFDGISLRRTPEIYLGIRNFIMKKFHSNPQMHLELKDLSELSDGEMDAQ LKVLEFLSHWGLINFHPFPPAVQGVSELVESITNADTEEKISVVDKLFQFETLQSYLIPA PNQAEVTAPIHTPSLLSEPTLTEDSITQAESSVEYHCNSCSVDCSRKRYHCRTQADFDLC CDCYDKGNLDAGMSQTDFIIMESAEIPGFGGTSWTDQETLLLLEALEIFQAKWGDIAEHV ATKSKAQCMLHFLKMPIMDPFLHDGDVNEISQETAEQVSAEQGTSRVTEKMEVEDKTKEI KTNDRKTAAKPKLNLTETEVNLDDNVVANNDTKSSGDINVDVCSNTGVSNRSSDTEPTKK ETSGENTSNIVNDVLKYAFEAVGHIPKIEGLGSFTEAGNPVMALVAFLSGLVDHDDVTTL CCSSLKAISDMSPALQLATMHCFILQDPPNDLKDPPVSISFANTDCGQQKDKDATSNPSV TDNDDNLKEESALSVEEPNTTSTSSKNTRKLSNAKESKDESPQVEPKPSSANDCDNPISQ VAKRASDNIRGHSSTVLPVSLNNTNEPCSISSQEASAGNTKDTSHTEHIEGDKPIYEDPP LEGKVELNKIEHEVTDLSAVQQHESIQTSLKKGYIQDHNSIKKTVADDVSVQRLQRAAAS AISAAAVKSKLLAKHEEYQIQRLAALVIDKQLHKMQAKMSVFTEADNLVLRAREHTERTR KKLLMERSAIIASRMAALPPRPNHQPGMPGSRLPVGYGVNQHLRRS

Transcript Sequence

Transcript ID	Os04t0110300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:602300:608876:1 gene:Os04g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein CHB704 description:Similar to H0201G08.8 protein. (Os04t0110300-01);Myb, DNA-binding domain containing protein. (Os04t0110300-02)
Sequence	AAAAATGGAGCCCAATCCCCCGCCGCCGCCCGCCGCCGCCACCGCAACCTACCGCCGCCG CGGCAAGCCCAAGCCCAAACCCAAGCGCAAGGCAGCCAAGCCCCCCTCGCCGTCCCCGCC GCCCAAGCGCCAGGCCCGGGACGACCCCCCGCACACGGGGCCACTCACCCGCCACTCGCC GCTCAACCCTGCGCCGGAGGATGCACCGCCCCAGCTCCACGCCGGGGAGCGCGACCCGCC TCCGCGCGCCTGGATAGAGCCCGCAAAGCTTCCGCCGGTGAGCGAGGAAGTCCAGGCCGT CCTGTCGCGCGGAGCCGGCGTCCACGTCGTCCCCTCCTTCGCAGGATGGTTTTCATGGAA GGAAATCCACCAAATTGAAAAGCAAGCATTGCCTTCGTTTTTTGATGGGATATCTTTACG GAGGACACCTGAGATATATTTGGGAATTAGAAATTTTATTATGAAGAAATTTCATTCTAA TCCTCAAATGCATTTGGAGTTGAAGGATTTGTCTGAGTTGTCAGATGGGGAGATGGATGC TCAGTTGAAAGTCTTGGAGTTCTTGTCACACTGGGGTTTGATCAATTTCCACCCTTTTCC ACCAGCTGTACAGGGGGTGAGTGAGCTGGTTGAGAGCATAACAAATGCTGATACAGAAGA GAAAATTTCTGTAGTGGATAAATTATTTCAGTTTGAAACATTGCAGTCATATCTCATTCC TGCTCCTAACCAAGCAGAGGTGACAGCTCCGATTCACACCCCGAGCTTGCTTTCTGAGCC TACTCTAACTGAAGATTCGATTACCCAAGCTGAGTCTTCTGTTGAGTACCACTGCAACTC TTGCTCAGTTGATTGCTCAAGGAAGCGCTACCATTGCAGAACTCAGGCAGACTTTGACTT GTGTTGTGACTGTTATGACAAAGGAAATTTGGATGCAGGCATGTCACAAACTGATTTCAT CATTATGGAATCTGCAGAAATTCCAGGCTTTGGTGGTACTAGCTGGACTGACCAGGAGAC CTTGCTTCTTTTGGAAGCTTTAGAAATTTTCCAAGCAAAATGGGGTGACATTGCCGAGCA TGTTGCTACAAAAAGCAAAGCACAATGCATGCTACACTTCCTTAAAATGCCAATTATGGA CCCATTTCTGCATGATGGAGATGTTAATGAAATATCTCAGGAAACTGCAGAGCAGGTCTC AGCAGAACAAGGTACTTCTCGTGTAACTGAGAAAATGGAAGTAGAAGACAAAACAAAAGA AATAAAAACTAATGATAGAAAAACTGCTGCAAAACCAAAATTGAACTTGACAGAAACAGA AGTAAACCTAGACGACAATGTTGTTGCAAATAATGATACCAAGAGTTCAGGTGATATCAA TGTGGATGTATGTAGCAATACTGGTGTATCAAATAGATCTTCAGATACCGAACCTACAAA GAAGGAAACTTCTGGGGAAAACACATCAAACATTGTTAATGATGTCCTGAAATATGCTTT TGAGGCTGTTGGTCACATTCCAAAGATAGAGGGCTTGGGTTCATTTACTGAAGCAGGAAA TCCTGTCATGGCACTGGTGGCATTTCTATCTGGCCTTGTGGATCATGACGATGTTACTAC GTTGTGCTGTAGTTCACTGAAAGCTATATCTGATATGTCTCCTGCTCTTCAACTGGCAAC AATGCATTGTTTTATTCTTCAGGATCCACCAAATGACCTCAAAGATCCACCGGTCAGTAT AAGCTTTGCAAACACAGATTGTGGGCAACAAAAAGACAAGGATGCTACTTCAAATCCAAG TGTTACTGACAATGATGACAATTTAAAAGAAGAGTCTGCTTTATCTGTGGAAGAGCCAAA TACCACATCCACATCATCGAAAAACACCAGGAAATTATCTAATGCGAAGGAATCTAAGGA TGAATCTCCCCAAGTGGAGCCCAAACCCAGTAGTGCCAACGATTGTGACAATCCAATTTC TCAGGTGGCAAAGAGGGCTTCTGATAATATAAGAGGACACAGTTCCACTGTGCTTCCTGT CAGTCTGAATAATACAAATGAACCTTGTTCCATATCTTCCCAAGAGGCTAGTGCAGGAAA CACAAAGGATACAAGTCATACAGAACACATAGAAGGAGATAAACCAATTTATGAGGATCC ACCATTAGAAGGAAAGGTAGAGTTGAACAAGATCGAACATGAAGTCACTGACTTATCTGC TGTACAGCAACATGAGTCCATCCAAACAAGTTTGAAGAAGGGCTACATACAAGATCATAA CAGTATTAAGAAAACAGTTGCCGATGATGTCTCCGTACAAAGGCTACAGCGGGCAGCAGC CAGTGCTATTTCAGCAGCTGCTGTGAAGTCGAAACTCCTTGCAAAGCATGAGGAATATCA AATCCAGCGACTAGCTGCACTTGTGATTGATAAACAGCTCCACAAGATGCAAGCGAAAAT GTCAGTTTTCACTGAAGCAGATAATTTGGTCCTGCGAGCGAGAGAACACACCGAGAGAAC TCGGAAGAAGCTTCTGATGGAGAGGAGCGCGATAATCGCTTCTCGGATGGCGGCATTGCC ACCCAGACCAAACCACCAACCTGGGATGCCTGGGAGCAGATTGCCGGTAGGGTATGGTGT GAATCAGCATCTGAGGCGATCTTGAGGCCTACTTCGCACGTGCTGATGACCTAATGTCCA CCTTCCAAGAAGGATAGATATAGACTGTAGGGCTGGCTTTTGTAGTTGTGCTAATCCAGT AATCCACCATGACCATGTGCAATATCCCATGTTAGTATGTTACAGGCTTAATATTTTGAA GCGTAATATTATTGCCTCACCTAGCTTTTAGTTACCCCCTGGTAGTGTAGAACTGCTGTC ACCTGGAATGTAGTATGTATTATAATGGTTTCAAGATCTAGGTTTTGGTGCTCCTGTCAC CTTGTGCTTC