Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0110200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:599975:600881:1 gene:Os04g0110200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.7 protein. (Os04t0110200-01)
Sequence

ATGCCGACGGTGCGGCGGCGCCACCCGGACGTGCACGTGAAGGCGCTGGAGGGCATCGTG
TCGGCCAACACCTTCTTCACGGTGGCCGTCTTCATCGGCATCACCGGCACCATCACGCCG
TCGTCCTCGATCCCCCCCAACTGCGTCGCCGGCGACGACATCGCCCGCAACTTCTTCCTC
TTCGAGATCCTCTCCTTCGGCTTCTACCTGCTCTCCAGCCTGGTGGCGCAGGGCATGAAG
CTGGCCGTCACCCTCCTCGCCACCGACGACTTCTACGGCGACGGCGAGCAGAAGCCCCCG
CCGTCCGACGACTGCGAGGAGATGCCCGCGTGGCGCGCCGCCGCGCCGCGGGAGCGCCGC
CGCGCCGTGCTCCGGTTCGCGCGGCCGATGATGCTGCTCGCGGCGGGCTGCTCCATCATG
GGCACCTTCTTCCTGCTGCTGTCCATGGTGGACGCCATCCAGCTCAAGTTCGGCCTCGTC
TCCTGCAACATCCCCCTCGCCGTCGGCACCACCTTCGCGCTCGCCGTGCTCGTCGTCGCC
GGCCTCGTCTTCTACGGCGCCACCGTCGCCTACGCGCTCACGCACTACCTGCCCTGA

Peptide Sequence

PEP ID

Os04t0110200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:599975:600881:1 gene:Os04g0110200 transcript:Os04t0110200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.7 protein. (Os04t0110200-01)
Sequence

MPTVRRRHPDVHVKALEGIVSANTFFTVAVFIGITGTITPSSSIPPNCVAGDDIARNFFL
FEILSFGFYLLSSLVAQGMKLAVTLLATDDFYGDGEQKPPPSDDCEEMPAWRAAAPRERR
RAVLRFARPMMLLAAGCSIMGTFFLLLSMVDAIQLKFGLVSCNIPLAVGTTFALAVLVVA
GLVFYGATVAYALTHYLP

Transcript Sequence

Transcript ID

Os04t0110200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:599975:600881:1 gene:Os04g0110200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.7 protein. (Os04t0110200-01)
Sequence

ACTCGGTGCGTGCGTGGGTCACTTGATCACTGAAGCGCACCAGCTAAGCTCACCGTCTTC
TTCCTCGCCGTCGCCGGAGGCCGGAGCAATGCCGACGGTGCGGCGGCGCCACCCGGACGT
GCACGTGAAGGCGCTGGAGGGCATCGTGTCGGCCAACACCTTCTTCACGGTGGCCGTCTT
CATCGGCATCACCGGCACCATCACGCCGTCGTCCTCGATCCCCCCCAACTGCGTCGCCGG
CGACGACATCGCCCGCAACTTCTTCCTCTTCGAGATCCTCTCCTTCGGCTTCTACCTGCT
CTCCAGCCTGGTGGCGCAGGGCATGAAGCTGGCCGTCACCCTCCTCGCCACCGACGACTT
CTACGGCGACGGCGAGCAGAAGCCCCCGCCGTCCGACGACTGCGAGGAGATGCCCGCGTG
GCGCGCCGCCGCGCCGCGGGAGCGCCGCCGCGCCGTGCTCCGGTTCGCGCGGCCGATGAT
GCTGCTCGCGGCGGGCTGCTCCATCATGGGCACCTTCTTCCTGCTGCTGTCCATGGTGGA
CGCCATCCAGCTCAAGTTCGGCCTCGTCTCCTGCAACATCCCCCTCGCCGTCGGCACCAC
CTTCGCGCTCGCCGTGCTCGTCGTCGCCGGCCTCGTCTTCTACGGCGCCACCGTCGCCTA
CGCGCTCACGCACTACCTGCCCTGATCATCAATCACTCCACTCATCAGTTAAATTAATTA
GTTACTCCTCCTTCCTCTTCTGCTGCTTAATTATTTTCAGTTTTGATTTTTGCATGAAAT
GTACAGATGTCTTTGATTTCTTGGTCAGATGATGATACGAATGAGAGAGACTTCATCATA
TTAAGCGTCGATATGATTGGATTCTTGTTGTTTTCGTTTGTGAAAAGTGGTGCGAAAGAG
TAGGTTT