Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0110100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:593362:594453:-1 gene:Os04g0110100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0110100-01)
Sequence	ATGCAATCTCTCTATAATCTGTACAAGATGATGCTAGTCGTCCTAGCTCTTCTCGGCGTC GCGACGGCGGCGGCGGCGGCGGCCGGCGACGTTGTGTCGTACAGCTACCCGGCCTTCAAC GCGACGACGACACGCGACGACAGCCTCGTCGCCGCCACCAACGCGTCAATCCTCACCACC GCCCGCCTCCTCTTCGACCCCGATTTCCCCCACGGCTTCAACGTCTCCGAGGGCTTCCTG CTCCTCTCCGGCGACATCGACGTCTGGCGCGACGGCGTCGGCTCCGCCGGGGCGCCGGCT CGCGAGGCATCCTTCAACACGACGTTCACCGTCGTCGCCGCCGCCTCTCCCGTCGCGTTC GTCGTCCTCCTCGACAGGTATCCACCGCTCCTTGACCAGAGTGGCCTCCGTGGGAGCAAC GTCTCATCCGCCGCCGATGGCGACGACGGCAACGCCACGAACAGCCTCGTCGCCGTCGAG GTCGGCACGGTGAAGTCCTACGGCAGAGAGTCCCCCGACGTCGGCCTCAACGTCACCGTC ACGCCAAACCGCACTACGGCGCCGAGCGGCAGCACGGTGTGGATCCAGTACGACGCCGTC GAGCACCGCCTGTCGGTGCACGTCGCCGCCGCCGGCGAGCCACGGCCATCTAATGCCCTC CTCGACGTGCCGCTATACCTCGCCGGCGGGCGCACCACCCAGACCGCGCTCGTCGGCTTC TTTGGCGGGACGATCGGGGATATCATCGTCGGCGTCCGTGGCTGGGAGCTGACCGTGGAG AGGTTGCGCGGCGATGACGGCGGCGGGGGGAAGAAGAGGACGTCGTGGGTGGTGATACTG CTGGCGGTGGTCGGGTCGGTGGCGGGCGTGGCGGCCATGGTGTCCGTGCTGGTGTGTCGC TTTGTGCGCAAGCGACGACACACGGAACCTAAGCACTAG

Peptide Sequence

PEP ID	Os04t0110100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:593362:594453:-1 gene:Os04g0110100 transcript:Os04t0110100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0110100-01)
Sequence	MQSLYNLYKMMLVVLALLGVATAAAAAAGDVVSYSYPAFNATTTRDDSLVAATNASILTT ARLLFDPDFPHGFNVSEGFLLLSGDIDVWRDGVGSAGAPAREASFNTTFTVVAAASPVAF VVLLDRYPPLLDQSGLRGSNVSSAADGDDGNATNSLVAVEVGTVKSYGRESPDVGLNVTV TPNRTTAPSGSTVWIQYDAVEHRLSVHVAAAGEPRPSNALLDVPLYLAGGRTTQTALVGF FGGTIGDIIVGVRGWELTVERLRGDDGGGGKKRTSWVVILLAVVGSVAGVAAMVSVLVCR FVRKRRHTEPKH

Transcript Sequence

Transcript ID	Os04t0110100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:593362:594453:-1 gene:Os04g0110100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase domain containing protein. (Os04t0110100-01)
Sequence	CATCACAAGTAAATGCAATCTCTCTATAATCTGTACAAGATGATGCTAGTCGTCCTAGCT CTTCTCGGCGTCGCGACGGCGGCGGCGGCGGCGGCCGGCGACGTTGTGTCGTACAGCTAC CCGGCCTTCAACGCGACGACGACACGCGACGACAGCCTCGTCGCCGCCACCAACGCGTCA ATCCTCACCACCGCCCGCCTCCTCTTCGACCCCGATTTCCCCCACGGCTTCAACGTCTCC GAGGGCTTCCTGCTCCTCTCCGGCGACATCGACGTCTGGCGCGACGGCGTCGGCTCCGCC GGGGCGCCGGCTCGCGAGGCATCCTTCAACACGACGTTCACCGTCGTCGCCGCCGCCTCT CCCGTCGCGTTCGTCGTCCTCCTCGACAGGTATCCACCGCTCCTTGACCAGAGTGGCCTC CGTGGGAGCAACGTCTCATCCGCCGCCGATGGCGACGACGGCAACGCCACGAACAGCCTC GTCGCCGTCGAGGTCGGCACGGTGAAGTCCTACGGCAGAGAGTCCCCCGACGTCGGCCTC AACGTCACCGTCACGCCAAACCGCACTACGGCGCCGAGCGGCAGCACGGTGTGGATCCAG TACGACGCCGTCGAGCACCGCCTGTCGGTGCACGTCGCCGCCGCCGGCGAGCCACGGCCA TCTAATGCCCTCCTCGACGTGCCGCTATACCTCGCCGGCGGGCGCACCACCCAGACCGCG CTCGTCGGCTTCTTTGGCGGGACGATCGGGGATATCATCGTCGGCGTCCGTGGCTGGGAG CTGACCGTGGAGAGGTTGCGCGGCGATGACGGCGGCGGGGGGAAGAAGAGGACGTCGTGG GTGGTGATACTGCTGGCGGTGGTCGGGTCGGTGGCGGGCGTGGCGGCCATGGTGTCCGTG CTGGTGTGTCGCTTTGTGCGCAAGCGACGACACACGGAACCTAAGCACTAGTATCATATT CATATAGGACTATGTATAGGTGTATAAGCTTGTACGTTAACTAGCTTATTTCGTTTTCAA TATTTCCTCATCTTTCTACGGATTTGTTATATATAGACTTCCTGCGACAGAAAATTGGAT AAATAACTTTCG