Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0109900-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:586142:587523:1 gene:Os04g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.5 protein. (Os04t0109900-00)
Sequence	TCCACCGTGGACGTGGAGGAGGAGCTCGACGCGGCGCGCGCCGCGATACGACGGGCGGCG CGGCAGCATCGCCGCGGCGGAGGCGGAGACGTCGGCTCCGCCAACTGGCTGAGGTTCTAC GGCGGCGAGGCGGACTACGACCTCCTCTCGCGCGTCTACCGCAACCCGGCGGCGTTCTAC CGGAGCTACGTGGAGATGGAGAGGCGGTTCAAGGTGTACGTGTACGAGGAAGGCGAGCCG CCCATCCTGCACGAGGGCCCGTGCAAGAACATCTACACCATCGAGGGCAGCTTCATCGAG CAGCTCGAGCTCATGTCGCCGTCGGACGCCGGCGGCGGCGTCCGGACGTGGGACCCAACG CGCGCCCACGCCTTCTTCCTGCCGTTCAGCGTCTCCCAGATGGTCAAGTTCGTCTACCGC CCGCCCTCCCAGGACCGCGCCCCGCTCCGCGCCATCGTCGCCGACTACGTCCGCGTCGTC GCCGCCCGCCACCCCTTCTGGAATCGCTCCGCCGGCGCCGACCACTTCATGCTCTCCTGC CATGATTGGGGGCCATACGCGTCGAGGGGGCAGCCGGAGCTGTACACGAACGCCATCCGC GCGCTCTGCAACGCCAACACGTCGGAGGGGTTCCGGCCGGGGAAGGACGTGAGCGTCCCG GAGATCAACCTCTACGACGGCGACATGCCGCGGGAGCTCCTGGCGCCGGCGCCGGGGCTG GAGTCCCGCCCGCTCCTCGCCTTCTTCGCCGGCGGCCGGCACGGGCACGTCCGCGACCTC CTGCTCCGCCACTGGAAGGGACGGGACGCGGCCACGTTCCCGGTGTACGAGTACGACCTC CCCGCCGCCGGCGACTACTACTCGTTCATGCGGCGCGCGCGCTTCTGCCTGTGCCCGAGC GGGCACGAGGTGGCGAGCCCGCGGGTGGTGGAGGCGATCCAGGCCGAGTGCGTGCCCGTG GTCATCGCCGACGGGTACGCGCTGCCGTTCGCCGACGTGCTGCGGTGGGAGGCGTTCTCG GTGGCGGTGGCGGTGGGCGACATCCCCAGGCTGAGGGAGAGGCTGGAGAGGATACCGGCG GCGGAGGTGGAGCGGCTCCGGCGAGGGGTGAGGCTGGTGAAGCGACACCTGATGCTGCAG CAGCCGCCGCGGAGGCTGGACATGTTCAACATGATCCTGCACTCTGTCTGGCTCAGGGGG CTCAACTTGAGACTCCACCGTTGA

Peptide Sequence

PEP ID	Os04t0109900-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:586142:587523:1 gene:Os04g0109900 transcript:Os04t0109900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.5 protein. (Os04t0109900-00)
Sequence	STVDVEEELDAARAAIRRAARQHRRGGGGDVGSANWLRFYGGEADYDLLSRVYRNPAAFY RSYVEMERRFKVYVYEEGEPPILHEGPCKNIYTIEGSFIEQLELMSPSDAGGGVRTWDPT RAHAFFLPFSVSQMVKFVYRPPSQDRAPLRAIVADYVRVVAARHPFWNRSAGADHFMLSC HDWGPYASRGQPELYTNAIRALCNANTSEGFRPGKDVSVPEINLYDGDMPRELLAPAPGL ESRPLLAFFAGGRHGHVRDLLLRHWKGRDAATFPVYEYDLPAAGDYYSFMRRARFCLCPS GHEVASPRVVEAIQAECVPVVIADGYALPFADVLRWEAFSVAVAVGDIPRLRERLERIPA AEVERLRRGVRLVKRHLMLQQPPRRLDMFNMILHSVWLRGLNLRLHR

Transcript Sequence

Transcript ID	Os04t0109900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:586142:587523:1 gene:Os04g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.5 protein. (Os04t0109900-00)
Sequence	TCCACCGTGGACGTGGAGGAGGAGCTCGACGCGGCGCGCGCCGCGATACGACGGGCGGCG CGGCAGCATCGCCGCGGCGGAGGCGGAGACGTCGGCTCCGCCAACTGGCTGAGGTTCTAC GGCGGCGAGGCGGACTACGACCTCCTCTCGCGCGTCTACCGCAACCCGGCGGCGTTCTAC CGGAGCTACGTGGAGATGGAGAGGCGGTTCAAGGTGTACGTGTACGAGGAAGGCGAGCCG CCCATCCTGCACGAGGGCCCGTGCAAGAACATCTACACCATCGAGGGCAGCTTCATCGAG CAGCTCGAGCTCATGTCGCCGTCGGACGCCGGCGGCGGCGTCCGGACGTGGGACCCAACG CGCGCCCACGCCTTCTTCCTGCCGTTCAGCGTCTCCCAGATGGTCAAGTTCGTCTACCGC CCGCCCTCCCAGGACCGCGCCCCGCTCCGCGCCATCGTCGCCGACTACGTCCGCGTCGTC GCCGCCCGCCACCCCTTCTGGAATCGCTCCGCCGGCGCCGACCACTTCATGCTCTCCTGC CATGATTGGGGGCCATACGCGTCGAGGGGGCAGCCGGAGCTGTACACGAACGCCATCCGC GCGCTCTGCAACGCCAACACGTCGGAGGGGTTCCGGCCGGGGAAGGACGTGAGCGTCCCG GAGATCAACCTCTACGACGGCGACATGCCGCGGGAGCTCCTGGCGCCGGCGCCGGGGCTG GAGTCCCGCCCGCTCCTCGCCTTCTTCGCCGGCGGCCGGCACGGGCACGTCCGCGACCTC CTGCTCCGCCACTGGAAGGGACGGGACGCGGCCACGTTCCCGGTGTACGAGTACGACCTC CCCGCCGCCGGCGACTACTACTCGTTCATGCGGCGCGCGCGCTTCTGCCTGTGCCCGAGC GGGCACGAGGTGGCGAGCCCGCGGGTGGTGGAGGCGATCCAGGCCGAGTGCGTGCCCGTG GTCATCGCCGACGGGTACGCGCTGCCGTTCGCCGACGTGCTGCGGTGGGAGGCGTTCTCG GTGGCGGTGGCGGTGGGCGACATCCCCAGGCTGAGGGAGAGGCTGGAGAGGATACCGGCG GCGGAGGTGGAGCGGCTCCGGCGAGGGGTGAGGCTGGTGAAGCGACACCTGATGCTGCAG CAGCCGCCGCGGAGGCTGGACATGTTCAACATGATCCTGCACTCTGTCTGGCTCAGGGGG CTCAACTTGAGACTCCACCGTTGA