Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0109400-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:560485:562482:1 gene:Os04g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.3 protein. (Os04t0109400-00)
Sequence	ATGGCACATCATGTCCTACCCATATTTCCAATTTTCCTTGTTACATTCTTCTTTGTGATG TTATGCTCAATCTCCTCGTCCAACGCATGCACTGGCCTGGAAGCTTGCACAAGCTTGGAG AAAGACGGGAGTGGCTCGGACAGCATCAGCATCCCGACTTTCGATGGCATCGACGAGCAC CAGTCGCTGCTCGTCCTCAAGAACGCGGAGATATGGCGCGACGTCCTCCGCGCGCCTCCC TACAAGCAACACCTCGTCGTCATCCGGCTCCGTCCTCCCGTCATCCGGTTCCGTCCTCCT CCCCTTCCGGATGGAGCTCTGGCGCCACGTCGTCTCCGGCGACATGATGACGAAGAACGA GGCGTCCTTCACCACCACTCTAAGGTTCATGATCATCTCATCTCGGACCGGCGGCCCGTG GGCAGCCTGGCGTTCGTCGTCGTCCCCACCCTCAACGCCGCCGATGGCGCCTTACCGCGG GCGTTGAACACCGCAAACTACACCATCACCACCACCTCCAATAATCATAGCTTGTCCCTT GATCTTGCAAGCATCATGTCGGACTACAACAACAACAGTAACAAGTCGACAAGCACAGCC GTGAACTACACGGTGTGGATCGACTACGACGGCATCGGGCACAAGATTTCTGCGTACATG GCCAACGACGGGCAACTGAAACCATCAAAGGCCATCTTTGCCGGGCACCTCACCATGAGC AACCGTGTCCCCAACAAGGCGTACATCGGTTTCTTTGCCTCCGGCTCCGATGGCGAGACA TACGGCTTGTTGAGCTGGAACATCACCGTGGACAGAGTCCCGGACTCGGGCATCGCTGCG AGCAAGAGCAAAAACAAACCATTCGAGACCGGATTCACGACAGTGATCGTGGTCTTCTCA TTCTTCTCTGTTTCTCTGATTGTGATCCTTGTGTTTCAGAGCAAGAAGAACTCCGATGCA AAGCAGCTTTTAGATGAGGTGCTGAGCCAACTCGCCAGGAAGCTTAAGTACTCGGAGATA AGGAACGCGACTGGTAACTTCACTGACGCGAGGAGACTCGGACGAGGTTCGTTCGGAGTC GTCTACATGGGGACGCTCACAACTCAGAGAAATGGGCGGACGCAAGAACAGCGGCAGCAG CAAGTAGCTGTGAAGAAGTTCGATCGGGACGAAAACCAGCAGCGTCGTTTCACCGATTTT CTTGTGGAGATTCAAGTTATAATCCGGTTGAAGCACAACAATATCGTGCAACTTATTGGT TGGTGCTTGGAGAAACGAGCGCTTTTGCTGGTGTACGAGTACAAGCACAACGGTAGCCTC GACAATCACCTGTTCGGCAACCACAGCCGCCAGCAGCAGGTGCTACCATGGCCGACACGC TACAGCATCGTCAGGGACGTCGCCGCGGGACTCCACTACATCCACCACGAGCTAGAGGAC ATCAAGTCCAGCAACATCCTGCTCGACCAAGAATTCCGTGCCTGCCTCGGAGACTTCGGC CTTGCCCGCGTCATCTCCGGTGGCAGGAGCTCCGCTTCAATGGAGCTCGCCGGCACCAGG GGTTTCATAGCGCCGGAGTACGCGCAGAATCGGGTGGCGACGCGGCGGACCGACGTGTAC GCGTTTGGAGCCCTCGTCCTTGAGATCGTCACCGGTAGGAAGGCACTCGATCACTCCCGG CCCAGTGACTCAGTGCTGATCGCTAACTGGGTACGGGATGAATTCCACAATAACGGCAAG CTGCTGGAAGCCGTGGACGGCAGCCTCACCACGGAGGAAGGTCTCCAGTACGATGCCGAC GACGCAGAACGGCTACTTCTCCTTGGCTTATCGTGCACCAGCCACAGCGCTTCAGACCGG CCAAGCATGGAGATGGTCGTGCAGATCGTTGCCAAGCCCGTGCCGCGGCCGGTCGTCGTT GTGCCTCGTGTGGAGCCGGCGTTCGTGGGGAGCTCATCGGCCGAGATCGATGATGCCTCA AGCCTAGGTCGCCGTTGA

Peptide Sequence

PEP ID	Os04t0109400-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:560485:562482:1 gene:Os04g0109400 transcript:Os04t0109400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.3 protein. (Os04t0109400-00)
Sequence	MAHHVLPIFPIFLVTFFFVMLCSISSSNACTGLEACTSLEKDGSGSDSISIPTFDGIDEH QSLLVLKNAEIWRDVLRAPPYKQHLVVIRLRPPVIRFRPPPLPDGALAPRRLRRHDDEER GVLHHHSKVHDHLISDRRPVGSLAFVVVPTLNAADGALPRALNTANYTITTTSNNHSLSL DLASIMSDYNNNSNKSTSTAVNYTVWIDYDGIGHKISAYMANDGQLKPSKAIFAGHLTMS NRVPNKAYIGFFASGSDGETYGLLSWNITVDRVPDSGIAASKSKNKPFETGFTTVIVVFS FFSVSLIVILVFQSKKNSDAKQLLDEVLSQLARKLKYSEIRNATGNFTDARRLGRGSFGV VYMGTLTTQRNGRTQEQRQQQVAVKKFDRDENQQRRFTDFLVEIQVIIRLKHNNIVQLIG WCLEKRALLLVYEYKHNGSLDNHLFGNHSRQQQVLPWPTRYSIVRDVAAGLHYIHHELED IKSSNILLDQEFRACLGDFGLARVISGGRSSASMELAGTRGFIAPEYAQNRVATRRTDVY AFGALVLEIVTGRKALDHSRPSDSVLIANWVRDEFHNNGKLLEAVDGSLTTEEGLQYDAD DAERLLLLGLSCTSHSASDRPSMEMVVQIVAKPVPRPVVVVPRVEPAFVGSSSAEIDDAS SLGRR

Transcript Sequence

Transcript ID	Os04t0109400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:560485:562482:1 gene:Os04g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0201G08.3 protein. (Os04t0109400-00)
Sequence	ATGGCACATCATGTCCTACCCATATTTCCAATTTTCCTTGTTACATTCTTCTTTGTGATG TTATGCTCAATCTCCTCGTCCAACGCATGCACTGGCCTGGAAGCTTGCACAAGCTTGGAG AAAGACGGGAGTGGCTCGGACAGCATCAGCATCCCGACTTTCGATGGCATCGACGAGCAC CAGTCGCTGCTCGTCCTCAAGAACGCGGAGATATGGCGCGACGTCCTCCGCGCGCCTCCC TACAAGCAACACCTCGTCGTCATCCGGCTCCGTCCTCCCGTCATCCGGTTCCGTCCTCCT CCCCTTCCGGATGGAGCTCTGGCGCCACGTCGTCTCCGGCGACATGATGACGAAGAACGA GGCGTCCTTCACCACCACTCTAAGGTTCATGATCATCTCATCTCGGACCGGCGGCCCGTG GGCAGCCTGGCGTTCGTCGTCGTCCCCACCCTCAACGCCGCCGATGGCGCCTTACCGCGG GCGTTGAACACCGCAAACTACACCATCACCACCACCTCCAATAATCATAGCTTGTCCCTT GATCTTGCAAGCATCATGTCGGACTACAACAACAACAGTAACAAGTCGACAAGCACAGCC GTGAACTACACGGTGTGGATCGACTACGACGGCATCGGGCACAAGATTTCTGCGTACATG GCCAACGACGGGCAACTGAAACCATCAAAGGCCATCTTTGCCGGGCACCTCACCATGAGC AACCGTGTCCCCAACAAGGCGTACATCGGTTTCTTTGCCTCCGGCTCCGATGGCGAGACA TACGGCTTGTTGAGCTGGAACATCACCGTGGACAGAGTCCCGGACTCGGGCATCGCTGCG AGCAAGAGCAAAAACAAACCATTCGAGACCGGATTCACGACAGTGATCGTGGTCTTCTCA TTCTTCTCTGTTTCTCTGATTGTGATCCTTGTGTTTCAGAGCAAGAAGAACTCCGATGCA AAGCAGCTTTTAGATGAGGTGCTGAGCCAACTCGCCAGGAAGCTTAAGTACTCGGAGATA AGGAACGCGACTGGTAACTTCACTGACGCGAGGAGACTCGGACGAGGTTCGTTCGGAGTC GTCTACATGGGGACGCTCACAACTCAGAGAAATGGGCGGACGCAAGAACAGCGGCAGCAG CAAGTAGCTGTGAAGAAGTTCGATCGGGACGAAAACCAGCAGCGTCGTTTCACCGATTTT CTTGTGGAGATTCAAGTTATAATCCGGTTGAAGCACAACAATATCGTGCAACTTATTGGT TGGTGCTTGGAGAAACGAGCGCTTTTGCTGGTGTACGAGTACAAGCACAACGGTAGCCTC GACAATCACCTGTTCGGCAACCACAGCCGCCAGCAGCAGGTGCTACCATGGCCGACACGC TACAGCATCGTCAGGGACGTCGCCGCGGGACTCCACTACATCCACCACGAGCTAGAGGAC ATCAAGTCCAGCAACATCCTGCTCGACCAAGAATTCCGTGCCTGCCTCGGAGACTTCGGC CTTGCCCGCGTCATCTCCGGTGGCAGGAGCTCCGCTTCAATGGAGCTCGCCGGCACCAGG GGTTTCATAGCGCCGGAGTACGCGCAGAATCGGGTGGCGACGCGGCGGACCGACGTGTAC GCGTTTGGAGCCCTCGTCCTTGAGATCGTCACCGGTAGGAAGGCACTCGATCACTCCCGG CCCAGTGACTCAGTGCTGATCGCTAACTGGGTACGGGATGAATTCCACAATAACGGCAAG CTGCTGGAAGCCGTGGACGGCAGCCTCACCACGGAGGAAGGTCTCCAGTACGATGCCGAC GACGCAGAACGGCTACTTCTCCTTGGCTTATCGTGCACCAGCCACAGCGCTTCAGACCGG CCAAGCATGGAGATGGTCGTGCAGATCGTTGCCAAGCCCGTGCCGCGGCCGGTCGTCGTT GTGCCTCGTGTGGAGCCGGCGTTCGTGGGGAGCTCATCGGCCGAGATCGATGATGCCTCA AGCCTAGGTCGCCGTTGA