Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0106500-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:410669:412516:-1 gene:Os04g0106500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to B0616E02-H0507E05.9 protein. (Os04t0106500-00)
Sequence	ATGAAGACTAGCTCCAGACACCATTGGTTCTCCCGCACCCGCTCCTCCTCGCCGCCGCCG CCTTCCAGGGATCAACCTCCTCCTCCGGCGTTCAGGCACGGGAGGCCAACGCCCGACGCC CACCCGGGCTGCATGGCCATCATGAGCTACCTCATCTTCTCCCCCGGCGCCGGCTGCGTC GGCCGCCCGCCCAATTCCTCCTCCTCCCACGTCGCCGTCGTCACCGCCGCTTCTCCGCCG TCGTCGTCCCTTGCTACGCCGGGCGAGGCGGGCCTCCAGGCGCCGCGCAACAGCCTCGAC CTCCTCGACGCCGACCTGCTCCGCCGCGACATCCAGATCGGCGTCCAGATCGAGCCGGCC TTCGACGCCCTCGCGCGCCCCAGGCCGTCCGCGCCGACCTCCGAGGCCGAGACGCCGCGC ACGCCCAGCCTCGTCGCGCGCCTCATGGGCATCGACGGCCTCCCCGACTCGCCCTCGCCG GCTACCTCCTCCAACTCCAAGCCGCGCGAGAAGAAGAAGCGCGTCATCCCGGAGTCCATC AGCCTCCGCCAGCCGCTCCGCGACCTCTCCCGCTCCCTCCCGGACACGCCGCGCGCCTCC ACGTCGTCGCTCAGGCCGGCGGCGGCGGTGGCGCCCACGTGGGACGTCGTCGACCACCCG CGCCTGTCACTGCAGGTGCTCAAGGACAACGTGCTCGACCGGGCCAGGCAGTACATGTCC ATGCCCACCTCGCCCACCTCCTTGTCCAAGAAGAAGAAGACCAGAAGCCGCCGCGACGCC ACCGCCGCCGCCGATGGCCGCTCCAGCAAGGAGAATGCCGTGCGCGAGATCGTCAGGCAG GCCAGGGAGACCGTCACAAACCGCAAGTCCAAGAAGAACGCCGCCGCCATTGGCAAGGAG AACGCGAGCCCCGTGCACCACCACCACCATTGCGGCAAGGAGAACGCGCCACCTGCAGCT AAGCAGGCGGCAGCCGCGCCGCCGATGAGGGCGCCTTTGGCTGAGCAGCAGCCGCACGCC CCGAGGCTTCCGCTGCAACCGAGACCTGCGCCACCGCCACCGCCGCCTCAGCAGCAGCGA GCGAAGCCGTCCCGGCCGCCACCTCCGCCTCCGCCGCTGGACCCGCCACCGAGAGCTGCG GCGCCACCCGCCAAGTGCAAGCGACCAGACGGGTGCGAGCGGTTCGCGACGCGGATCAAG AAGCCCGCTCCACCGCCAATATTACCGGCGCAACCATCGCCGACGAGCTCGACGGACGTC AGGGACATCGTGGTCTCCGGCGAGCGCAAGATCACGTCGTCGACGCCTGCGGTGACGGCG CCTCCAGCAACGGTGGAGGAGGACCCGGAGTACGTGTACCTGCGGGCGGTGCTGGAGCGC GGCGGGTTCATGCGGGCGAGAGCGGCGGCGTTGAAGGGGCACTCGGTGGAGACGCCGGTA GACCCGCTGGTGTTCCACCTCCTGGAGCTGGAGCTGCCGGCGGACGAGGCGCGGCTGGGG CCCCTCCGGCACAGATGGAACCGGAAGCTGCTGTTCCAGCTGACGCAGGAGATGCTCGCG GAGCAGCTGCTGGGGCTGGACCCGACCTCGCCGTCGACGTCGTCGGGAGCGGCGCTGGTG GCGCGGCTGTGGAGGCGAGCGCGGAGCTTCCCGGCGGCGGACTGCAGGGTGGTGGAGGAC ATACTGGCGCTGGTGGCGGCGGACGTGGAGGCGGCGGCGCGGGCGCGGCGGGTGGTGGAG CGGCGGCTGGTGGCGGAGGAGGGGGAGGACGTGGCGGAGGAGGTGGCGGAGCGGGTGCTC GACGCGCTGCTGGACGCGGAGATCGCGGCGGTTGCCGGTGGGGAGTGA

Peptide Sequence

PEP ID	Os04t0106500-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:410669:412516:-1 gene:Os04g0106500 transcript:Os04t0106500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to B0616E02-H0507E05.9 protein. (Os04t0106500-00)
Sequence	MKTSSRHHWFSRTRSSSPPPPSRDQPPPPAFRHGRPTPDAHPGCMAIMSYLIFSPGAGCV GRPPNSSSSHVAVVTAASPPSSSLATPGEAGLQAPRNSLDLLDADLLRRDIQIGVQIEPA FDALARPRPSAPTSEAETPRTPSLVARLMGIDGLPDSPSPATSSNSKPREKKKRVIPESI SLRQPLRDLSRSLPDTPRASTSSLRPAAAVAPTWDVVDHPRLSLQVLKDNVLDRARQYMS MPTSPTSLSKKKKTRSRRDATAAADGRSSKENAVREIVRQARETVTNRKSKKNAAAIGKE NASPVHHHHHCGKENAPPAAKQAAAAPPMRAPLAEQQPHAPRLPLQPRPAPPPPPPQQQR AKPSRPPPPPPPLDPPPRAAAPPAKCKRPDGCERFATRIKKPAPPPILPAQPSPTSSTDV RDIVVSGERKITSSTPAVTAPPATVEEDPEYVYLRAVLERGGFMRARAAALKGHSVETPV DPLVFHLLELELPADEARLGPLRHRWNRKLLFQLTQEMLAEQLLGLDPTSPSTSSGAALV ARLWRRARSFPAADCRVVEDILALVAADVEAAARARRVVERRLVAEEGEDVAEEVAERVL DALLDAEIAAVAGGE

Transcript Sequence

Transcript ID	Os04t0106500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:410669:412516:-1 gene:Os04g0106500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to B0616E02-H0507E05.9 protein. (Os04t0106500-00)
Sequence	ATGAAGACTAGCTCCAGACACCATTGGTTCTCCCGCACCCGCTCCTCCTCGCCGCCGCCG CCTTCCAGGGATCAACCTCCTCCTCCGGCGTTCAGGCACGGGAGGCCAACGCCCGACGCC CACCCGGGCTGCATGGCCATCATGAGCTACCTCATCTTCTCCCCCGGCGCCGGCTGCGTC GGCCGCCCGCCCAATTCCTCCTCCTCCCACGTCGCCGTCGTCACCGCCGCTTCTCCGCCG TCGTCGTCCCTTGCTACGCCGGGCGAGGCGGGCCTCCAGGCGCCGCGCAACAGCCTCGAC CTCCTCGACGCCGACCTGCTCCGCCGCGACATCCAGATCGGCGTCCAGATCGAGCCGGCC TTCGACGCCCTCGCGCGCCCCAGGCCGTCCGCGCCGACCTCCGAGGCCGAGACGCCGCGC ACGCCCAGCCTCGTCGCGCGCCTCATGGGCATCGACGGCCTCCCCGACTCGCCCTCGCCG GCTACCTCCTCCAACTCCAAGCCGCGCGAGAAGAAGAAGCGCGTCATCCCGGAGTCCATC AGCCTCCGCCAGCCGCTCCGCGACCTCTCCCGCTCCCTCCCGGACACGCCGCGCGCCTCC ACGTCGTCGCTCAGGCCGGCGGCGGCGGTGGCGCCCACGTGGGACGTCGTCGACCACCCG CGCCTGTCACTGCAGGTGCTCAAGGACAACGTGCTCGACCGGGCCAGGCAGTACATGTCC ATGCCCACCTCGCCCACCTCCTTGTCCAAGAAGAAGAAGACCAGAAGCCGCCGCGACGCC ACCGCCGCCGCCGATGGCCGCTCCAGCAAGGAGAATGCCGTGCGCGAGATCGTCAGGCAG GCCAGGGAGACCGTCACAAACCGCAAGTCCAAGAAGAACGCCGCCGCCATTGGCAAGGAG AACGCGAGCCCCGTGCACCACCACCACCATTGCGGCAAGGAGAACGCGCCACCTGCAGCT AAGCAGGCGGCAGCCGCGCCGCCGATGAGGGCGCCTTTGGCTGAGCAGCAGCCGCACGCC CCGAGGCTTCCGCTGCAACCGAGACCTGCGCCACCGCCACCGCCGCCTCAGCAGCAGCGA GCGAAGCCGTCCCGGCCGCCACCTCCGCCTCCGCCGCTGGACCCGCCACCGAGAGCTGCG GCGCCACCCGCCAAGTGCAAGCGACCAGACGGGTGCGAGCGGTTCGCGACGCGGATCAAG AAGCCCGCTCCACCGCCAATATTACCGGCGCAACCATCGCCGACGAGCTCGACGGACGTC AGGGACATCGTGGTCTCCGGCGAGCGCAAGATCACGTCGTCGACGCCTGCGGTGACGGCG CCTCCAGCAACGGTGGAGGAGGACCCGGAGTACGTGTACCTGCGGGCGGTGCTGGAGCGC GGCGGGTTCATGCGGGCGAGAGCGGCGGCGTTGAAGGGGCACTCGGTGGAGACGCCGGTA GACCCGCTGGTGTTCCACCTCCTGGAGCTGGAGCTGCCGGCGGACGAGGCGCGGCTGGGG CCCCTCCGGCACAGATGGAACCGGAAGCTGCTGTTCCAGCTGACGCAGGAGATGCTCGCG GAGCAGCTGCTGGGGCTGGACCCGACCTCGCCGTCGACGTCGTCGGGAGCGGCGCTGGTG GCGCGGCTGTGGAGGCGAGCGCGGAGCTTCCCGGCGGCGGACTGCAGGGTGGTGGAGGAC ATACTGGCGCTGGTGGCGGCGGACGTGGAGGCGGCGGCGCGGGCGCGGCGGGTGGTGGAG CGGCGGCTGGTGGCGGAGGAGGGGGAGGACGTGGCGGAGGAGGTGGCGGAGCGGGTGCTC GACGCGCTGCTGGACGCGGAGATCGCGGCGGTTGCCGGTGGGGAGTGA