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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0106000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:386221:386877:-1 gene:Os04g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0106000-01)
Sequence

AGCCCGGCCGCGGCGGCGGACTTCGTGCGGCGGTCGTGCCGCGCGACGCGGTACCCGCAG
GTGTGCGAGCGGAGCCTCATGCCGCAGGCCCCCGCGGTGGGGCGCAGCCCGCGTCTCCTG
GCGCAGGCCGCGCTCACCGTCGGCGCCGACCGCGCGCGCTCCTGCTCGGGCTACCTCGGG
GGCGGCGGCTCCTCCAGCTCGTCCAAGCGCTCCGGCGGCGGCGGCAGGGGCGGCGCGGTG
GGGGACTGCGCGGACACGCTGCGGGACGCGGAGGAGCGGCTGCGGCAGTCGGCGGCGGAG
ATGAGCCGGATGGGGCGGTCGGGGAGCCCGCGGTTCGCGTGGCGGCTGAGCAACGTGCAG
ACCTGGGCCAGCGCCGCGCTCACCGACGCCTCCACCTGCCTCGACTCCCTCGCCACCTAC
GCCGCCCCCGGCATCGACGTCGACGCCCTCAGGAAGCGCGTCGGCGCCGTCTCCCAGGCC
ACCAGCAACGCCCTCGCCCTCGTCAACAACCTCGATCCGCACCACCACTTGTAA

Peptide Sequence

PEP ID

Os04t0106000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:386221:386877:-1 gene:Os04g0106000 transcript:Os04t0106000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0106000-01)
Sequence

SPAAAADFVRRSCRATRYPQVCERSLMPQAPAVGRSPRLLAQAALTVGADRARSCSGYLG
GGGSSSSSKRSGGGGRGGAVGDCADTLRDAEERLRQSAAEMSRMGRSGSPRFAWRLSNVQ
TWASAALTDASTCLDSLATYAAPGIDVDALRKRVGAVSQATSNALALVNNLDPHHHL

Transcript Sequence

Transcript ID

Os04t0106000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:386221:386877:-1 gene:Os04g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0106000-01)
Sequence

AGCCCGGCCGCGGCGGCGGACTTCGTGCGGCGGTCGTGCCGCGCGACGCGGTACCCGCAG
GTGTGCGAGCGGAGCCTCATGCCGCAGGCCCCCGCGGTGGGGCGCAGCCCGCGTCTCCTG
GCGCAGGCCGCGCTCACCGTCGGCGCCGACCGCGCGCGCTCCTGCTCGGGCTACCTCGGG
GGCGGCGGCTCCTCCAGCTCGTCCAAGCGCTCCGGCGGCGGCGGCAGGGGCGGCGCGGTG
GGGGACTGCGCGGACACGCTGCGGGACGCGGAGGAGCGGCTGCGGCAGTCGGCGGCGGAG
ATGAGCCGGATGGGGCGGTCGGGGAGCCCGCGGTTCGCGTGGCGGCTGAGCAACGTGCAG
ACCTGGGCCAGCGCCGCGCTCACCGACGCCTCCACCTGCCTCGACTCCCTCGCCACCTAC
GCCGCCCCCGGCATCGACGTCGACGCCCTCAGGAAGCGCGTCGGCGCCGTCTCCCAGGCC
ACCAGCAACGCCCTCGCCCTCGTCAACAACCTCGATCCGCACCACCACTTGTAATTACTC
TAAATCACTCCCCTACGTGCACCTCTACAATCACTTGTATGTAGTAATAATCTCATCGCT
CCTATCCTACACGTATTATGGATGCTTAATTATAGTAGTAACTGCCTTGCTTCTTCC