Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0103900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:258818:263006:-1 gene:Os04g0103900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone synthase, polyketide synthase 2 description:Similar to Chalcone synthase. (Os04t0103900-01)
Sequence	ATGGGTAGCCAAGAATACATTAAGCAGGGCGGGCAGCAGCTGGTGGCGGCGATCCTGGGC ATCGGCACGGCTGTTCCACCCTACGTTCTGCCCCAATCCTCCTTCCCCGACTACTACTTT GACATTTCCAACTCCAATCACCTCCTTGACCTCAAGGCCAAGTTTGCAGATATCTGTGAG AAGACAATGATCGACAAGCGTCACGTGCACATGTCGGACGAGTTCCTGAGGAGCAACCCT TCCGTGGCGGCGTACAACTCCCCCTCTATCAACGTCCGCCAGAATCTCACCGATGTCACT GTGCCCCAGCTGGGCGCTGCCGCCGCCCGGCTCGCCATCGCCGACTGGGGCCGGCCGGCG TGCGAGATCACCCACCTGGTGATGTGCACCACCGTCAGCGGATGCATGCCCGGCGCCGAC TTCGAGGTGGTGAAGCTGCTCGGTCTCCCGCTCACCACCAAGCGCTGCATGATGTACCAC ATCGGCTGCCATGGCGGCGGCACCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAAT CCAGGCGGCCGTGTGCTGGTGGTCTGCTCCGAGGTCGTCTCCATGGTGTTCCGCGGGCCT TGTGAATCGCACATGGGCAACCTGGTAGGGCAGGCGCTGTTCGGGGATGCCGCCGGTGCG GTGGTGGTCGGCGCGGATCCGGTGGAGGCTAACAGTGAGCGCACGCTGTTCGAGATGGTG TCGGCGTGGCAGGACATCATCCCGGAGACGGAGGAGATGGTGGTGGCGAAGCTGCGGGAG GAGGGGCTGGTGTACAACCTGCACCGCGACGTGGCGGCGCGCGTGGCGGCCAGCATGGAG TCGCTGGTGAAGAAGGCGATGGTGGAGAAGGACTGGAACGAGGAGGTGTTCTGGCTGGTG CATCCCGGCGGGAGGGACATCCTGGACCGGGTGGTTCTCACGCTCGGCCTCCGCGACGAC AAGGTGGCCGTGTGCCGCGAGGTGATGAGGCAGCACGGCAACACGCTGAGCTCCTGCGTC ATCATGGCCATGGAGGAGATGCGGCGGAGGTCGGCGGAGCGGGGGCTGAGCACGGCCGGC GAGGGCCTCGAGTGGGGGCTGCTCTTCGGCTTCGGGCCAGGCCTCACCGTGGAGACCATC CTCCTACGCGCGCCACCATGCAACCAAGCCCAAGCCGTCTGA

Peptide Sequence

PEP ID	Os04t0103900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:258818:263006:-1 gene:Os04g0103900 transcript:Os04t0103900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone synthase, polyketide synthase 2 description:Similar to Chalcone synthase. (Os04t0103900-01)
Sequence	MGSQEYIKQGGQQLVAAILGIGTAVPPYVLPQSSFPDYYFDISNSNHLLDLKAKFADICE KTMIDKRHVHMSDEFLRSNPSVAAYNSPSINVRQNLTDVTVPQLGAAAARLAIADWGRPA CEITHLVMCTTVSGCMPGADFEVVKLLGLPLTTKRCMMYHIGCHGGGTALRLAKDLAENN PGGRVLVVCSEVVSMVFRGPCESHMGNLVGQALFGDAAGAVVVGADPVEANSERTLFEMV SAWQDIIPETEEMVVAKLREEGLVYNLHRDVAARVAASMESLVKKAMVEKDWNEEVFWLV HPGGRDILDRVVLTLGLRDDKVAVCREVMRQHGNTLSSCVIMAMEEMRRRSAERGLSTAG EGLEWGLLFGFGPGLTVETILLRAPPCNQAQAV

Transcript Sequence

Transcript ID	Os04t0103900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:258818:263006:-1 gene:Os04g0103900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone synthase, polyketide synthase 2 description:Similar to Chalcone synthase. (Os04t0103900-01)
Sequence	ATCCTTGAAGCCAGCCAGCTCGCTCGCTCTAGACTCTACCTTTTTCGCTTTTTGCTAGAG ATCTAGCCACTTTCTTTGATCGACATATATATCCATCGAGATAAAAGGAGATAGTGACAA GTAATTAACTTAGTTTTTTCCAATAACGAAATAAAATAGTTTCTACGTCTTTTCCACCTC TGCCAGCAGAGGCGCAGCCAAGTAACTTTTAATTATAGTTATAAATTAATACACAGAGAA TGGGTAGCCAAGAATACATTAAGCAGGGCGGGCAGCAGCTGGTGGCGGCGATCCTGGGCA TCGGCACGGCTGTTCCACCCTACGTTCTGCCCCAATCCTCCTTCCCCGACTACTACTTTG ACATTTCCAACTCCAATCACCTCCTTGACCTCAAGGCCAAGTTTGCAGATATCTGTGAGA AGACAATGATCGACAAGCGTCACGTGCACATGTCGGACGAGTTCCTGAGGAGCAACCCTT CCGTGGCGGCGTACAACTCCCCCTCTATCAACGTCCGCCAGAATCTCACCGATGTCACTG TGCCCCAGCTGGGCGCTGCCGCCGCCCGGCTCGCCATCGCCGACTGGGGCCGGCCGGCGT GCGAGATCACCCACCTGGTGATGTGCACCACCGTCAGCGGATGCATGCCCGGCGCCGACT TCGAGGTGGTGAAGCTGCTCGGTCTCCCGCTCACCACCAAGCGCTGCATGATGTACCACA TCGGCTGCCATGGCGGCGGCACCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAATC CAGGCGGCCGTGTGCTGGTGGTCTGCTCCGAGGTCGTCTCCATGGTGTTCCGCGGGCCTT GTGAATCGCACATGGGCAACCTGGTAGGGCAGGCGCTGTTCGGGGATGCCGCCGGTGCGG TGGTGGTCGGCGCGGATCCGGTGGAGGCTAACAGTGAGCGCACGCTGTTCGAGATGGTGT CGGCGTGGCAGGACATCATCCCGGAGACGGAGGAGATGGTGGTGGCGAAGCTGCGGGAGG AGGGGCTGGTGTACAACCTGCACCGCGACGTGGCGGCGCGCGTGGCGGCCAGCATGGAGT CGCTGGTGAAGAAGGCGATGGTGGAGAAGGACTGGAACGAGGAGGTGTTCTGGCTGGTGC ATCCCGGCGGGAGGGACATCCTGGACCGGGTGGTTCTCACGCTCGGCCTCCGCGACGACA AGGTGGCCGTGTGCCGCGAGGTGATGAGGCAGCACGGCAACACGCTGAGCTCCTGCGTCA TCATGGCCATGGAGGAGATGCGGCGGAGGTCGGCGGAGCGGGGGCTGAGCACGGCCGGCG AGGGCCTCGAGTGGGGGCTGCTCTTCGGCTTCGGGCCAGGCCTCACCGTGGAGACCATCC TCCTACGCGCGCCACCATGCAACCAAGCCCAAGCCGTCTGATGTGATTCTCTCATCCATC CATCCTCCTTCCGTTCGTCCGTCCCTCCAATATTTGGAAAATATATTTTTCTCCTAAACT ATTTATCCGATCACACCGTTATATTCGTTATAATTAAACTTTTACAACAAAATATCATAT GATTATATTCCAATAAAATAAAAATATTTGTTTCAAACCATTAAAACACAATGTTTCATG TTTCATATGTAATAGTTATATCTTTCAATGTGTATCATCATTGTGTTCCTCAAAATTCAC AGAACTACATGCCACTAC