Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0103200-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:219782:222781:-1 gene:Os04g0103200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3M description:Proteasome component region PCI domain containing protein. (Os04t0103200-01);Proteasome component region PCI domain containing protein. (Os04t0103200-02)
Sequence	ATGGCGACGATCGTGAACACGACGGAGGAGGAGCCGATGCTGGCCGTGGTGCGCTTCACC GCCGAGCTGGCCTGGGCGGACGCCGGCGCCGACGTCGCCGAGCCGGAGGTCACCCGTCTC TGCGTCGAGGCGCAGCAGCACATCCTCGCCGCCCGCTGGCTCGACATGGCCTCCCTCATG CTCGCCTCCGCCGACCTCCTCCTCCAATCCACGCGCCTCCCCGACAAGGACAAAGATCTC GAGTGCATCCTCGCTATCATCTGCAACCTCGTCACCAAGGCCCGATCCCAAGACGAGGCC CTGCAGATCGCCGAACTCATCTGCGCCAAGCTCACCCACCAGCCCCAAGACAAACCGGCC CTGCGCCTCAAAGTTCTCTTCAGCTTGTACAATCTGCTCGGGAGCCCCTATGCCAAGGCC TTCGTCTACAAGAAGGCACTCGACCTCGCCGCCGCTGGGAAGGCTGCCGACTGCATTATC CCTACTTTTAAGAACATCGACAGCTTCATCAGCGATTGGGGCATTGGCAAGGTGGAGCAG AGGGACCTGTTCCTCGCTGCCGCTAGGATCCTCAAGGACCAGAAAGGCATGAACAAGGAG TACTTCAACTTTCTGAATAAGTACCTTGCCACCTTCGATGGATCGGCCGATGACGCTGAT GCAATCGGTGATGCAAAGGAAGAAGCTGTTGCAGCAATCATTGAGTTTGTCAAGTCATCT GATCTCTATCAGTGTGATCTACTCAATATGCCAGCAGTTGCACAGCTGGAAAAAGACGAA AAGTATCAGCTGGTTTATGAGCTCTTGAAGATATTCCTTACTCAGAGGCTTGATTCCTAT TTAGAGTTTCAGTCAGCTAATTCTGCCTTGCTGAAAGGTTATGGACTGGTTCATGAGGAT TGCATAACAAAAATGAGACTGATGTCCCTGCTTGACCTCAGCAGCCGTTGTGCTGGGGAG ATCCCTTACCATGCAATCATAGATGCACTTAAGATCAATGATGATGAAGTGGAGTATTGG ATTGTGAAAGCTATTTCATGCAAGATATTGGATTGCAAAGTTGACCAGCTTAACCAGGTT ATCATTGTCAGTCGGCATACTGAGAGGATATTTGGGATGCCACAGTGGCAGAGTTTACGT TCAAAGCTTGGAGTTTGGAGGGGAAACATTGCTAGTGCTATTAACACAATACAAGCAAAC AAGGTGACTGATGATGGATCACAGGGGATCCAAGGCTTGATGATCCGTTGA

Peptide Sequence

PEP ID	Os04t0103200-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:219782:222781:-1 gene:Os04g0103200 transcript:Os04t0103200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3M description:Proteasome component region PCI domain containing protein. (Os04t0103200-01);Proteasome component region PCI domain containing protein. (Os04t0103200-02)
Sequence	MATIVNTTEEEPMLAVVRFTAELAWADAGADVAEPEVTRLCVEAQQHILAARWLDMASLM LASADLLLQSTRLPDKDKDLECILAIICNLVTKARSQDEALQIAELICAKLTHQPQDKPA LRLKVLFSLYNLLGSPYAKAFVYKKALDLAAAGKAADCIIPTFKNIDSFISDWGIGKVEQ RDLFLAAARILKDQKGMNKEYFNFLNKYLATFDGSADDADAIGDAKEEAVAAIIEFVKSS DLYQCDLLNMPAVAQLEKDEKYQLVYELLKIFLTQRLDSYLEFQSANSALLKGYGLVHED CITKMRLMSLLDLSSRCAGEIPYHAIIDALKINDDEVEYWIVKAISCKILDCKVDQLNQV IIVSRHTERIFGMPQWQSLRSKLGVWRGNIASAINTIQANKVTDDGSQGIQGLMIR

Transcript Sequence

Transcript ID	Os04t0103200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:219782:222781:-1 gene:Os04g0103200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3M description:Proteasome component region PCI domain containing protein. (Os04t0103200-01);Proteasome component region PCI domain containing protein. (Os04t0103200-02)
Sequence	CTCTCCGGCGGCGGCGGCGTCTTGTGCGCGTGAGAAAGAGAGGAGAAGAAGATGGCGACG ATCGTGAACACGACGGAGGAGGAGCCGATGCTGGCCGTGGTGCGCTTCACCGCCGAGCTG GCCTGGGCGGACGCCGGCGCCGACGTCGCCGAGCCGGAGGTCACCCGTCTCTGCGTCGAG GCGCAGCAGCACATCCTCGCCGCCCGCTGGCTCGACATGGCCTCCCTCATGCTCGCCTCC GCCGACCTCCTCCTCCAATCCACGCGCCTCCCCGACAAGGACAAAGATCTCGAGTGCATC CTCGCTATCATCTGCAACCTCGTCACCAAGGCCCGATCCCAAGACGAGGCCCTGCAGATC GCCGAACTCATCTGCGCCAAGCTCACCCACCAGCCCCAAGACAAACCGGCCCTGCGCCTC AAAGTTCTCTTCAGCTTGTACAATCTGCTCGGGAGCCCCTATGCCAAGGCCTTCGTCTAC AAGAAGGCACTCGACCTCGCCGCCGCTGGGAAGGCTGCCGACTGCATTATCCCTACTTTT AAGAACATCGACAGCTTCATCAGCGATTGGGGCATTGGCAAGGTGGAGCAGAGGGACCTG TTCCTCGCTGCCGCTAGGATCCTCAAGGACCAGAAAGGCATGAACAAGGAGTACTTCAAC TTTCTGAATAAGTACCTTGCCACCTTCGATGGATCGGCCGATGACGCTGATGCAATCGGT GATGCAAAGGAAGAAGCTGTTGCAGCAATCATTGAGTTTGTCAAGTCATCTGATCTCTAT CAGTGTGATCTACTCAATATGCCAGCAGTTGCACAGCTGGAAAAAGACGAAAAGTATCAG CTGGTTTATGAGCTCTTGAAGATATTCCTTACTCAGAGGCTTGATTCCTATTTAGAGTTT CAGTCAGCTAATTCTGCCTTGCTGAAAGGTTATGGACTGGTTCATGAGGATTGCATAACA AAAATGAGACTGATGTCCCTGCTTGACCTCAGCAGCCGTTGTGCTGGGGAGATCCCTTAC CATGCAATCATAGATGCACTTAAGATCAATGATGATGAAGTGGAGTATTGGATTGTGAAA GCTATTTCATGCAAGATATTGGATTGCAAAGTTGACCAGCTTAACCAGGTTATCATTGTC AGTCGGCATACTGAGAGGATATTTGGGATGCCACAGTGGCAGAGTTTACGTTCAAAGCTT GGAGTTTGGAGGGGAAACATTGCTAGTGCTATTAACACAATACAAGCAAACAAGGTGACT GATGATGGATCACAGGGGATCCAAGGCTTGATGATCCGTTGATGGAGAGGGGTTCCTGAA TTGAAATTATAGTTTCAACTTTGAGTAGATGAGCAATCCTTTTGTATGAGATTACTTGTA ATGTGAATTACTTTGATCCCATGACCTTGTGGCTGGATCTGGATTGCTATGGCATGCTAA GCAATCTCATTGTTTTTGTAGTCATAGCGGTGCTTAAAAGTCGGTTGTTACACAAGTACC AATCAGTCGATTACTAAAGAGTTCCAACAGAATGGCAGATCTATTGTGGCAATTTTCCTT CATAACGGATTGATGAGTTAATGTATTATTGTTTAGAACATCTGGTGCGATTTTTCATAA CAATTATGACAGTCATAGAACGTCTTGTTC