Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0102600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:182523:186397:-1 gene:Os04g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit). (Os04t0102600-01)
Sequence	ATGGTTTCCCTGTCGACGTGGTTTCGCTACGCCGCGCACAAGTTCGAGTACTCCATCTCC CTCTCATGGAAGAAGTATAACGTTGGCCAGATCAACAGCACCCAGTTAACCGATGCCGTC TGGAAGAACTTCTTCCAAGGCAAGCTCACCTACATGCATTGGAACAAGGGGGGAGAAGCC ATGGCCCCCATCGAATCTACTACGGGAGGAACCCTCCTTGTTAGAAAGCTCGTCAATTTG TCTCCAACACAAGTCTTTGTTGGTGATGTTGTCTTACTAAAAGACCCAGAGAAATCTGAT GATTTAATCGTTCGACGATTGGCTGCCCTAGAAGGTTATGAGATGGTCTCTAATGATGAG AAGGATGAGCCGTTTGTACTTGACAAGGATCAATGCTGGGTTCTGGCAGACAACCAATCA CTAAAGCCAAAGGAAGCTAGGGATAGCCGCTTGTTTGGACCAGTCCCTATGACTGATATC CTTGGCAGAGTGATATACTCTTTAAGAACGGCTGTCGACCATGGCCCAGTGGAGAACAGC CGAATGGCCATGAACCAGGATTCACCAGTTCTGGCAGTAGAGCTTGATGTGGAAGAGATG GCGAAGAATAATAAAGTGTAG

Peptide Sequence

PEP ID	Os04t0102600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:182523:186397:-1 gene:Os04g0102600 transcript:Os04t0102600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit). (Os04t0102600-01)
Sequence	MVSLSTWFRYAAHKFEYSISLSWKKYNVGQINSTQLTDAVWKNFFQGKLTYMHWNKGGEA MAPIESTTGGTLLVRKLVNLSPTQVFVGDVVLLKDPEKSDDLIVRRLAALEGYEMVSNDE KDEPFVLDKDQCWVLADNQSLKPKEARDSRLFGPVPMTDILGRVIYSLRTAVDHGPVENS RMAMNQDSPVLAVELDVEEMAKNNKV

Transcript Sequence

Transcript ID	Os04t0102600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:182523:186397:-1 gene:Os04g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit). (Os04t0102600-01)
Sequence	ACCCCGAATCCAATATAAATCGCAGCGTTCCCCGTCCCTCTCTCTCCTTTCCTCCTCCCT CCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCTCCTCTTTGTTTCTCCTCTTAGGGG CTAGGGCTTGGCTTTCGAGAGGCAGCACCGCCGCCGGGGCAATCGAGCAGGCGGAGGGGA GGAGCTAATCAAATCAAGTCAAATCGAATCAAATCAAATTCAAATTCAAATTCGACTAGG GCAGCAGGAGGAGGATGGTTTCCCTGTCGACGTGGTTTCGCTACGCCGCGCACAAGTTCG AGTACTCCATCTCCCTCTCATGGAAGAAGTATAACGTTGGCCAGATCAACAGCACCCAGT TAACCGATGCCGTCTGGAAGAACTTCTTCCAAGGCAAGCTCACCTACATGCATTGGAACA AGGGGGGAGAAGCCATGGCCCCCATCGAATCTACTACGGGAGGAACCCTCCTTGTTAGAA AGCTCGTCAATTTGTCTCCAACACAAGTCTTTGTTGGTGATGTTGTCTTACTAAAAGACC CAGAGAAATCTGATGATTTAATCGTTCGACGATTGGCTGCCCTAGAAGGTTATGAGATGG TCTCTAATGATGAGAAGGATGAGCCGTTTGTACTTGACAAGGATCAATGCTGGGTTCTGG CAGACAACCAATCACTAAAGCCAAAGGAAGCTAGGGATAGCCGCTTGTTTGGACCAGTCC CTATGACTGATATCCTTGGCAGAGTGATATACTCTTTAAGAACGGCTGTCGACCATGGCC CAGTGGAGAACAGCCGAATGGCCATGAACCAGGATTCACCAGTTCTGGCAGTAGAGCTTG ATGTGGAAGAGATGGCGAAGAATAATAAAGTGTAGATAATTAGTGCTTTTGACGTGCTGT GGTGTAACTTTTCCCTTCGATGGATTTTGTTATTCGAGAGATTAGTTGCTTCAAGTAGAA CATTATTCTGAACTTGTTCACTATTTACTCGTGGAGAAGTCAATAATCATAAGAATAACC ATACGGGTTGCT