Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0862100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36394773:36401591:1 gene:Os03g0862100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0862100-01)
Sequence	ATGCCGCCCGCCAGCCTTGTCTCCTCCCCTCCCCTCGCGTGCTGCCTTCAGCTCCATCGA CTCCTCCGCCCCGCCGCCCTACTCCCCTCGCCACCACGCCTCCGCCTCCGCCTCCGCCCC CTCCGAGCCGATTCCTCCCCCTCGCCAGACGCCTTCGCTGGCTGGTCGGATGGGGACGAA CAAGACGAACAAGACAAGTCCCCTGGGCCATTTCGAGGGCTTCTAGGACCTGGCCTTGCT GGACTCTTCTTTCTTGCTGGCCTCACCTTCGCTGCAATTTCTTTCAGAAGCAACGCCGCA AATGGACCTAAGGCACAAATCGATACCTCGTCTACAAACAGTCAGGAGGCACCTTACTCC ACTGATAATACCTGTAAAGAGGATGGTCTCAAGGATGCTCAAGTTTCGTTACCAAGTGAT AGCAAAGGTGAAACAAGCTTGGATGATGAAGCACATAGTAGCACTGACCCACTGCCTGTA CAAGTAAATGCCACTGCGGAGGGATCAACTGAACATGAGACACAGCATCCCTTGCAAAAC AGTGAGCTAGTTCCTCCTGACAAATATGTTCCTAGTGAGGATGCAGGTCAAGCGCACAAT CTCGTTGCTTCTGATGGGGCTGAAAGCCTGGTGTCTCCTTTGTCAAACTCCACGGAACCT TCCATCGCTGCTTATGACTCGCCTGACAAACTTTACGGTGTAGGTCCCTCTGAGGGAACT CCTTATGTAGAAGATACATTAAACTGCGAAATTACTTTGCCAGAAAACCAGCATCTGGGT GAAACCTTAACGTCAGATACAATGCTAGGTTCAGGTGATGCTTCGCTTATCCAGGAAATC TCTGACACTGCAGCTTCATCTGATGCAAAGGACAAAGATACTGAGCAGAATCCTGAACTT CATAGAAAAAATGGGATTTCACCATCAAGAATGCCTGATTATACAGAATATGGACATGCT GATCAGTTGCTTTCATTTGGTTCAAATGATGTGTCCACAGAAGCAAATAAGCCAGGAAAT GGGGTGGAGACTTTAGCATCCAATCAAAATGAAGGAGCAGACGAATTAGAAAACCAAAAC AGTTTATACGAGTCTACAACACCCGACAAATCTTTTGCCTCTTCTGGAATTCCTGCTCCC ACACTGCTCTCTGCAGCTTTACGGGTGCGTACTGGACAGATTATGGTTCCAGCGGCAGTT GACCCAGCCCAGGCAAGCGCATTGGCTGCACTACAGGTCCTAAAGGTGATTGAACCTGAT GCCCAAGCTGGTGACTTATGTACCCGACGAGAATACGCTCGATGGTTGGTGGTCGCAAGC AATTGTCTATCCAGGAACACTTCCTCCAAAGTGTATCCAGCAATGTATATTGAGAATGTG ACTGAACTTGCCTTTGATGATATCACACCTGAAGATTTTGATTTTCCATTTATACAAGGC TTGGCAGAAGCTGGGTTGATTTCCAGCAAGCTTTCGAGATCTGATATGAACGTTCCCCTA GATGTTGACAATTTGCATAATTTGTTTTCTCCGGAATGTCCTGTGTCACGTCAAGACCTC GTGAGTTGGAAGATGGCTTTGGATAAAAGGCAATTACCTGAAGTGGACAAAACTTCTATG TACAAAGCTTCTGGATATATGGACGTTGATAAAATAAATGCAGCTGCTTGGCCCGCTTTG GTGGCTGACTTGGATGCTGGAGACCAGAGCATTACAGCTCTTGCATTTGGTTTTACAAGG CTCTTCCAGCCGGATAAACCCGTGACGAAAGGACAAGTGGCTCTTGCACTTTCAACTGGT GATTCTGCTGATGTGGTTATGGAGGAGCTTGCTCGTATTGAAGCAGAGAAAATAGCTGAA GATGCTGTAAATGCACATGGTGAACTCGTTGCTCAGGTTGAGAAAGATCTGAATGCCACT TTTGAGAGAGAGCTTACAAAGGAAAGAGAAAAAATAGAGAGACTTGAAAAGTTAGCTGAA GAAGCTAGGGTTGAATTGGACAAGTTGAGAGCAGAAAGAGTGGAAGAAAATAATGCTCTG ATTAGGGGCAGAGCTTCTGTTGAATCTGAAATGGAAGTTCTCTCAAAATTGAGGAGTGAA GTAGAGGAACAGCTGCAAAGTGTGCTGAGCAAGAAGGTGGAGATCTCGTTTGAGAAGAAT AGGATTGAGAAACTCCAAACGGAAATAGAGAATGACAGACAGGCTGTTGTGCAGCTTCAA TATGAACTTGAAGTTGAGAGGAAGGCTTTATCAATGGCCCGGGCTTGGGCAGAGGATGAA GCAAAGAAGGCCAGGGAGCATGCCAGGGCCCTTGAGGAAGCCCGGAACCAATGGGAGCGT CATGGAATCAAGGTTGTTGTTGAAGGAGGGCTTGAAGATGATGCATCAGCTGGAGTCACA TGGGCCAATGCTGGCAAAGAACATCAAGTTGACGAAGCAATTAACCGAGCTGGGTCTTTG CTGGAGAAGCTGAAGTCAATGTCTGCTGAGATAAAAGTCCGGTCTTGCCATTCCCTGGAG AGAGTAATACAGCATGTGAGGTCTTTCATCTCAATTCTAAAGCAGGGAGCAGAAGAAGCA ACGCAGCGATTTACAGATCTAGGGGCTGCTGCAGCTTTGAAGGCAAAGAAGTTGTCATCC GAAGCACAGGACAATGTCTACGTGTTTGGTTCAACCATTGGGGATAAGTCGAAGAGGGTG GTGGAGGACTGCAAAGAGGGCCTGGAGAAGTTTGTACACAGATTCAAGACAGACTAG

Peptide Sequence

PEP ID	Os03t0862100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36394773:36401591:1 gene:Os03g0862100 transcript:Os03t0862100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0862100-01)
Sequence	MPPASLVSSPPLACCLQLHRLLRPAALLPSPPRLRLRLRPLRADSSPSPDAFAGWSDGDE QDEQDKSPGPFRGLLGPGLAGLFFLAGLTFAAISFRSNAANGPKAQIDTSSTNSQEAPYS TDNTCKEDGLKDAQVSLPSDSKGETSLDDEAHSSTDPLPVQVNATAEGSTEHETQHPLQN SELVPPDKYVPSEDAGQAHNLVASDGAESLVSPLSNSTEPSIAAYDSPDKLYGVGPSEGT PYVEDTLNCEITLPENQHLGETLTSDTMLGSGDASLIQEISDTAASSDAKDKDTEQNPEL HRKNGISPSRMPDYTEYGHADQLLSFGSNDVSTEANKPGNGVETLASNQNEGADELENQN SLYESTTPDKSFASSGIPAPTLLSAALRVRTGQIMVPAAVDPAQASALAALQVLKVIEPD AQAGDLCTRREYARWLVVASNCLSRNTSSKVYPAMYIENVTELAFDDITPEDFDFPFIQG LAEAGLISSKLSRSDMNVPLDVDNLHNLFSPECPVSRQDLVSWKMALDKRQLPEVDKTSM YKASGYMDVDKINAAAWPALVADLDAGDQSITALAFGFTRLFQPDKPVTKGQVALALSTG DSADVVMEELARIEAEKIAEDAVNAHGELVAQVEKDLNATFERELTKEREKIERLEKLAE EARVELDKLRAERVEENNALIRGRASVESEMEVLSKLRSEVEEQLQSVLSKKVEISFEKN RIEKLQTEIENDRQAVVQLQYELEVERKALSMARAWAEDEAKKAREHARALEEARNQWER HGIKVVVEGGLEDDASAGVTWANAGKEHQVDEAINRAGSLLEKLKSMSAEIKVRSCHSLE RVIQHVRSFISILKQGAEEATQRFTDLGAAAALKAKKLSSEAQDNVYVFGSTIGDKSKRV VEDCKEGLEKFVHRFKTD

Transcript Sequence

Transcript ID	Os03t0862100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36394773:36401591:1 gene:Os03g0862100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0862100-01)
Sequence	CCTCCTCGTGGGTGGGTGGGTGGGGGTGGGGGTGTGGTGCTCCCTTCCCTTGTAGTTCTC TTTCTCCCCATGGTTGGATGATTGGATCGACATCGACTTCCAGACTTCCAGTGGCAAGGC AGCCCTAGCCCTAGCCATGCCGCCCGCCAGCCTTGTCTCCTCCCCTCCCCTCGCGTGCTG CCTTCAGCTCCATCGACTCCTCCGCCCCGCCGCCCTACTCCCCTCGCCACCACGCCTCCG CCTCCGCCTCCGCCCCCTCCGAGCCGATTCCTCCCCCTCGCCAGACGCCTTCGCTGGCTG GTCGGATGGGGACGAACAAGACGAACAAGACAAGTCCCCTGGGCCATTTCGAGGGCTTCT AGGACCTGGCCTTGCTGGACTCTTCTTTCTTGCTGGCCTCACCTTCGCTGCAATTTCTTT CAGAAGCAACGCCGCAAATGGACCTAAGGCACAAATCGATACCTCGTCTACAAACAGTCA GGAGGCACCTTACTCCACTGATAATACCTGTAAAGAGGATGGTCTCAAGGATGCTCAAGT TTCGTTACCAAGTGATAGCAAAGGTGAAACAAGCTTGGATGATGAAGCACATAGTAGCAC TGACCCACTGCCTGTACAAGTAAATGCCACTGCGGAGGGATCAACTGAACATGAGACACA GCATCCCTTGCAAAACAGTGAGCTAGTTCCTCCTGACAAATATGTTCCTAGTGAGGATGC AGGTCAAGCGCACAATCTCGTTGCTTCTGATGGGGCTGAAAGCCTGGTGTCTCCTTTGTC AAACTCCACGGAACCTTCCATCGCTGCTTATGACTCGCCTGACAAACTTTACGGTGTAGG TCCCTCTGAGGGAACTCCTTATGTAGAAGATACATTAAACTGCGAAATTACTTTGCCAGA AAACCAGCATCTGGGTGAAACCTTAACGTCAGATACAATGCTAGGTTCAGGTGATGCTTC GCTTATCCAGGAAATCTCTGACACTGCAGCTTCATCTGATGCAAAGGACAAAGATACTGA GCAGAATCCTGAACTTCATAGAAAAAATGGGATTTCACCATCAAGAATGCCTGATTATAC AGAATATGGACATGCTGATCAGTTGCTTTCATTTGGTTCAAATGATGTGTCCACAGAAGC AAATAAGCCAGGAAATGGGGTGGAGACTTTAGCATCCAATCAAAATGAAGGAGCAGACGA ATTAGAAAACCAAAACAGTTTATACGAGTCTACAACACCCGACAAATCTTTTGCCTCTTC TGGAATTCCTGCTCCCACACTGCTCTCTGCAGCTTTACGGGTGCGTACTGGACAGATTAT GGTTCCAGCGGCAGTTGACCCAGCCCAGGCAAGCGCATTGGCTGCACTACAGGTCCTAAA GGTGATTGAACCTGATGCCCAAGCTGGTGACTTATGTACCCGACGAGAATACGCTCGATG GTTGGTGGTCGCAAGCAATTGTCTATCCAGGAACACTTCCTCCAAAGTGTATCCAGCAAT GTATATTGAGAATGTGACTGAACTTGCCTTTGATGATATCACACCTGAAGATTTTGATTT TCCATTTATACAAGGCTTGGCAGAAGCTGGGTTGATTTCCAGCAAGCTTTCGAGATCTGA TATGAACGTTCCCCTAGATGTTGACAATTTGCATAATTTGTTTTCTCCGGAATGTCCTGT GTCACGTCAAGACCTCGTGAGTTGGAAGATGGCTTTGGATAAAAGGCAATTACCTGAAGT GGACAAAACTTCTATGTACAAAGCTTCTGGATATATGGACGTTGATAAAATAAATGCAGC TGCTTGGCCCGCTTTGGTGGCTGACTTGGATGCTGGAGACCAGAGCATTACAGCTCTTGC ATTTGGTTTTACAAGGCTCTTCCAGCCGGATAAACCCGTGACGAAAGGACAAGTGGCTCT TGCACTTTCAACTGGTGATTCTGCTGATGTGGTTATGGAGGAGCTTGCTCGTATTGAAGC AGAGAAAATAGCTGAAGATGCTGTAAATGCACATGGTGAACTCGTTGCTCAGGTTGAGAA AGATCTGAATGCCACTTTTGAGAGAGAGCTTACAAAGGAAAGAGAAAAAATAGAGAGACT TGAAAAGTTAGCTGAAGAAGCTAGGGTTGAATTGGACAAGTTGAGAGCAGAAAGAGTGGA AGAAAATAATGCTCTGATTAGGGGCAGAGCTTCTGTTGAATCTGAAATGGAAGTTCTCTC AAAATTGAGGAGTGAAGTAGAGGAACAGCTGCAAAGTGTGCTGAGCAAGAAGGTGGAGAT CTCGTTTGAGAAGAATAGGATTGAGAAACTCCAAACGGAAATAGAGAATGACAGACAGGC TGTTGTGCAGCTTCAATATGAACTTGAAGTTGAGAGGAAGGCTTTATCAATGGCCCGGGC TTGGGCAGAGGATGAAGCAAAGAAGGCCAGGGAGCATGCCAGGGCCCTTGAGGAAGCCCG GAACCAATGGGAGCGTCATGGAATCAAGGTTGTTGTTGAAGGAGGGCTTGAAGATGATGC ATCAGCTGGAGTCACATGGGCCAATGCTGGCAAAGAACATCAAGTTGACGAAGCAATTAA CCGAGCTGGGTCTTTGCTGGAGAAGCTGAAGTCAATGTCTGCTGAGATAAAAGTCCGGTC TTGCCATTCCCTGGAGAGAGTAATACAGCATGTGAGGTCTTTCATCTCAATTCTAAAGCA GGGAGCAGAAGAAGCAACGCAGCGATTTACAGATCTAGGGGCTGCTGCAGCTTTGAAGGC AAAGAAGTTGTCATCCGAAGCACAGGACAATGTCTACGTGTTTGGTTCAACCATTGGGGA TAAGTCGAAGAGGGTGGTGGAGGACTGCAAAGAGGGCCTGGAGAAGTTTGTACACAGATT CAAGACAGACTAGCCAGTAACTATTAGTGTCTACACCAACAGTTGATAGTTCCTGTCAAA CTTGAGAAAGAGGAACCGTATTAGTTTCTTGGAATAAATTCCTCCATGAGTGCTGCTGCT CAGGTGTGGTGGACTGGTGGTGTTGTAAAGTATTGAAACTGAAACTAGCACAGAAGGTTC CATAGAATAAGCCTTGTTCTGTAATGTAATGGAATCCAAAAAGAGCAAGGCAGACAGTGA GTCTCCTTGAATGTTACTTAGAC