Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0861900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36384914:36390090:1 gene:Os03g0861900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0861900-01)
Sequence	ATGAATTCAATGAACCCATATCGATCGATTGATATGTGCCTCCGCCTCCGCCGCTCTGCC TCCTCCTGGGCCGCCGCCGTCGCTGACCACGCTCGCTCCGGTCGCCACGACGCCGCGCTC ACTGTCTTCCGCCGCGTTCTCGCCGTCCACCCGACCACCGCCGCCGCCGACGAGCTCGCC TGCTCCGCCCTCCTCCGCTGCTGCGATGCCCGCTTGGCCTACCAGATACACGCCCAGGCA TGCCGGCGCGGCTTGGTGGCCTCCAATCCCGTCCTGGCCTGCTCCCTGCTCGCCTTCTAC GCTGCCGCCGCCTCCTCTCCCACCGCCGCAATACCGCCTGCCTGCAACCTGTTCGACGAA ATGGCACACAAGGATGCCGTCTCCTACACAGCCATGATCTCTGCTCTCGTCCGCGCGGGC GCGGCCCACTGGAGGCAAGCTCTCGCGCTCTATCCCTGCATGCTCCAAGCCGGTGCGCCG CCCACTCAACACACCTTCGCCCAGCTACTCTCTGCCTGCGCCTCCGGCCGCCTGCACCAC CAAGGCACTCAGCTTCATGCTCAGCTCCTGCGCTGGGGAGCGGGTCTCAACCTGGTGCTC AAGACCGCGCTCCTCCATATGTACTGCAACTGCGGCAACATGGGCTATGCCCACACCGTG CTCCACTCCACGCCTCAAACCGACGTCGTGCTCTGGACCGCCATCATTACTGGCTACGCG CGGAGTGGAGACCTCCAGTCTGCTCTTCAGATGTTCCGCTCCATGACCCGTGCTGCAGTG CTGCCCAATGCCTTCACCTACGCTGCCCTGATCTCTGCTTGCTCCTCCTTCCGGGCACTG CAGCCTGGACGGCAGATTCATGCCCGCTTGTTCAAGTTTGGACTAGAGCATGATACCTCA GTCTGCAATGCACTTGTGGACTTGTACAGCAAGTCCTCCAGCCGTTTACTCGACTTGTTG CACACTTTCCATGCAGTCGACAAGCCGAATGTCGTGTCCTGGACTGCCTTGATCGCTGGA CTTGCATGCCATGGCAGAGATGAGGAGGCGTTTTTGGCATTTTCTCAGATGCGGCTTAGC GGGGTGCTTCCCAACTCGTTCACCGTCTCCACTCTTCTCAAAGGCAGTAGCTCCTCGCTA GCTTTCCTGCATGCCAGGAAAATCCATGGCTACATTCTCAAGACCAGCTTTGAATCTTTG GATGCAGCTGTTGGGAACTCCTTGGTTGATGTTTATGTTAGGTTTGCAAGGATGGATGAT GCATGGGCAGTGGCGACCACAATGGCCTTCATAAGGGACAGGTTCACATACACAAGCCTT GCTAGAGGGTTAAATCAGATGGGCCTTCAACAGAGGACCCTTGAAATGTTTGTCCGGATG TTCCATGAGGATGTTGATATCGATGGTTTCAGCATCGCTAGCTTCCTTTCGTCTGCTGCA AGCTTGGCATCCATAGAGACTGGGAAGCAGTTGCATAGCTGCTCGGTGAAACTAGGATTG AGTAGTGACATTTCGGTCTCTAACAGTCTTATTGACATGTACAGCAAATGCAAGTGTATG GGGGATGCTAGGAGCGTTTTCCAGTCAATCAGCGAGCCAAAAGTTGTGTCCTGGAATGCC TTGATGTCTGCACTGGTATCCAACGAGTATTATAATGAAGCGTTGTCGGCTTTCGAAGAC ATGACATTGGTTGGAGCTAAGCCTGATGGCATCACTTTCTCACTAATGCTTTTCGCTTGC AACCGCAGTGGCTTAGTTGACATTGGCATCAAATACTTCAACTCTATGGGCAATTTGTTT GGTGTTCTCCCACAGAGGAGCCACTACACACTCTTTCTGGATATGTTAGGACGATCAGGT CGTCTTACAGAGGCAGCGAGCACCATTGATGTTATACCCATCCAGCCAGACCTAGTTAAT GTGCAGGGCTCTATTGGCATCTTGAAATCTCTGTAA

Peptide Sequence

PEP ID	Os03t0861900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36384914:36390090:1 gene:Os03g0861900 transcript:Os03t0861900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0861900-01)
Sequence	MNSMNPYRSIDMCLRLRRSASSWAAAVADHARSGRHDAALTVFRRVLAVHPTTAAADELA CSALLRCCDARLAYQIHAQACRRGLVASNPVLACSLLAFYAAAASSPTAAIPPACNLFDE MAHKDAVSYTAMISALVRAGAAHWRQALALYPCMLQAGAPPTQHTFAQLLSACASGRLHH QGTQLHAQLLRWGAGLNLVLKTALLHMYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGYA RSGDLQSALQMFRSMTRAAVLPNAFTYAALISACSSFRALQPGRQIHARLFKFGLEHDTS VCNALVDLYSKSSSRLLDLLHTFHAVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLS GVLPNSFTVSTLLKGSSSSLAFLHARKIHGYILKTSFESLDAAVGNSLVDVYVRFARMDD AWAVATTMAFIRDRFTYTSLARGLNQMGLQQRTLEMFVRMFHEDVDIDGFSIASFLSSAA SLASIETGKQLHSCSVKLGLSSDISVSNSLIDMYSKCKCMGDARSVFQSISEPKVVSWNA LMSALVSNEYYNEALSAFEDMTLVGAKPDGITFSLMLFACNRSGLVDIGIKYFNSMGNLF GVLPQRSHYTLFLDMLGRSGRLTEAASTIDVIPIQPDLVNVQGSIGILKSL

Transcript Sequence

Transcript ID	Os03t0861900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36384914:36390090:1 gene:Os03g0861900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0861900-01)
Sequence	AGTCTGCATTGCAATCCCCCACCCAACCCAACCCATGAAATGAAATGAATTCAATGAACC CATATCGATCGATTGATATGTGCCTCCGCCTCCGCCGCTCTGCCTCCTCCTGGGCCGCCG CCGTCGCTGACCACGCTCGCTCCGGTCGCCACGACGCCGCGCTCACTGTCTTCCGCCGCG TTCTCGCCGTCCACCCGACCACCGCCGCCGCCGACGAGCTCGCCTGCTCCGCCCTCCTCC GCTGCTGCGATGCCCGCTTGGCCTACCAGATACACGCCCAGGCATGCCGGCGCGGCTTGG TGGCCTCCAATCCCGTCCTGGCCTGCTCCCTGCTCGCCTTCTACGCTGCCGCCGCCTCCT CTCCCACCGCCGCAATACCGCCTGCCTGCAACCTGTTCGACGAAATGGCACACAAGGATG CCGTCTCCTACACAGCCATGATCTCTGCTCTCGTCCGCGCGGGCGCGGCCCACTGGAGGC AAGCTCTCGCGCTCTATCCCTGCATGCTCCAAGCCGGTGCGCCGCCCACTCAACACACCT TCGCCCAGCTACTCTCTGCCTGCGCCTCCGGCCGCCTGCACCACCAAGGCACTCAGCTTC ATGCTCAGCTCCTGCGCTGGGGAGCGGGTCTCAACCTGGTGCTCAAGACCGCGCTCCTCC ATATGTACTGCAACTGCGGCAACATGGGCTATGCCCACACCGTGCTCCACTCCACGCCTC AAACCGACGTCGTGCTCTGGACCGCCATCATTACTGGCTACGCGCGGAGTGGAGACCTCC AGTCTGCTCTTCAGATGTTCCGCTCCATGACCCGTGCTGCAGTGCTGCCCAATGCCTTCA CCTACGCTGCCCTGATCTCTGCTTGCTCCTCCTTCCGGGCACTGCAGCCTGGACGGCAGA TTCATGCCCGCTTGTTCAAGTTTGGACTAGAGCATGATACCTCAGTCTGCAATGCACTTG TGGACTTGTACAGCAAGTCCTCCAGCCGTTTACTCGACTTGTTGCACACTTTCCATGCAG TCGACAAGCCGAATGTCGTGTCCTGGACTGCCTTGATCGCTGGACTTGCATGCCATGGCA GAGATGAGGAGGCGTTTTTGGCATTTTCTCAGATGCGGCTTAGCGGGGTGCTTCCCAACT CGTTCACCGTCTCCACTCTTCTCAAAGGCAGTAGCTCCTCGCTAGCTTTCCTGCATGCCA GGAAAATCCATGGCTACATTCTCAAGACCAGCTTTGAATCTTTGGATGCAGCTGTTGGGA ACTCCTTGGTTGATGTTTATGTTAGGTTTGCAAGGATGGATGATGCATGGGCAGTGGCGA CCACAATGGCCTTCATAAGGGACAGGTTCACATACACAAGCCTTGCTAGAGGGTTAAATC AGATGGGCCTTCAACAGAGGACCCTTGAAATGTTTGTCCGGATGTTCCATGAGGATGTTG ATATCGATGGTTTCAGCATCGCTAGCTTCCTTTCGTCTGCTGCAAGCTTGGCATCCATAG AGACTGGGAAGCAGTTGCATAGCTGCTCGGTGAAACTAGGATTGAGTAGTGACATTTCGG TCTCTAACAGTCTTATTGACATGTACAGCAAATGCAAGTGTATGGGGGATGCTAGGAGCG TTTTCCAGTCAATCAGCGAGCCAAAAGTTGTGTCCTGGAATGCCTTGATGTCTGCACTGG TATCCAACGAGTATTATAATGAAGCGTTGTCGGCTTTCGAAGACATGACATTGGTTGGAG CTAAGCCTGATGGCATCACTTTCTCACTAATGCTTTTCGCTTGCAACCGCAGTGGCTTAG TTGACATTGGCATCAAATACTTCAACTCTATGGGCAATTTGTTTGGTGTTCTCCCACAGA GGAGCCACTACACACTCTTTCTGGATATGTTAGGACGATCAGGTCGTCTTACAGAGGCAG CGAGCACCATTGATGTTATACCCATCCAGCCAGACCTAGTTAATGTGCAGGGCTCTATTG GCATCTTGAAATCTCTGTAAGAATCGAGTCATAGGTGGAAATATTGCAAGGAACTTAGAT TGTGGCCAATCATTCATCAAGGATGGCATCTGCGGTACTCCGGTGATAGAAGAGTGTCGT CTGCAGGCCCCAAGATCCACAAGGGTTATTTCTTGGGCTTTCCCTTCTGGCATCTTCAAG TTGAGCACAGGAGGCAGGAGAATGGACAAGATAAACTTCTGGCAACGACATGACATCATC TGAAAAGTTCTGATCCATTGGTAGTCCCCATACAGTCCCCTTTCTTGTTTGGCTACCTGT AATTGTTTGTGCACAGATAAGTCAGGAGCAATCAGGTTTTCAAGACGTTTGCTGTCCTTC TCGTTGAGGGAGGAGTAGAACTGCTGGATCACATCGGGCGGCGCTTCTGAGGCCTTAGCT GTACTTGTAGTTTGATGAAAGTGGGAGGAGATTGGAAGGAAGCAGCCGTTAAGGCAGAAT TGATCATCATTGTGTTGGTTGTTTGTCTGTCTGTTTGATGACGGGAAGGAATTGGCCCCT GTTAAAGACTAATCTTCAGTAAACATAGGCCCGCTTGGTTTGGTTTTTAAGGAGAGGAAC CAGGAATGGATTGTCTTTTGCTTGCTTGCCTACCAAACGAAACGGTGGAAGAGGATGCCA ATCTGCGCATGGTAGTTTTGCTGTTGCTGGAAAAGGGGTATCAGGCAAAGATGCAGAACA GAGATGGATGCATGGGTGAGATAAGAATCAGAATCATCAGCGCAGCTGGCTTTGCGACCC AGAAGCCAGAAAGGTCGCCTACGTGCTTGCTGAACTGTACTACTCTGTACATATTCTGAT ATGCATGCATACGTAGTACTACAATACAAACGTGTTGCATACAGTGTACTACGACATACT ATAAACCCTCCTCTTTATAAGTGACGTATGGTAAAAGATTGAGCTGGCTAAATTAAGATG