Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0861800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36381746:36384498:1 gene:Os03g0861800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 178 description:Cyclin-like F-box domain containing protein. (Os03t0861800-01);Hypothetical conserved gene. (Os03t0861800-02)
Sequence	ATGGAGGAGCCTGGCCCTGAGGAAGAGAAGGAGGAGGAGGAGGCGCGCTTCGACTTCCTC GAGTGGATCGGCCCGGACACCTCCGCCGCCGTTTTCACCTTCCTAGACCACCCCGCTGAT CTCGCCCGCGCCTCCGCCGTCTCCCGTTCCTGGCGCCGATTCGTTGTTCGGAATGGCTTC AGCAAGATCCAATGCCTGCGCCTTTGCCCTGAAGCTTCAAACTTCACCCGTATTATTACC AAACAAGCCATTGCCTCTGCTTCTGAGTCGGATGCGGAGCACCAGCACAGGGCGTACATG CATCTCAGCTATGCCCTTCTCTTGGATGACCCCCAGGACTGCATCATCCGCTGCATCGGT GCCTCCACCACCGACAATTTCCCTGAGGAGACCATACAAAACACCCTTGTGCCCACCGAT TGGGTGGCCATGATGAGGCCCTCTTATTGGTCCAGCGCCGGCCACTTCGATCCTGCTGTG CCCGAATGCCTCTTTTACAGGCTTCGCTCCGATCTATGCCTCGTTCAACAAATCAACATA CAGCCATTCAGAGCTTTCTTCCAGTATGGTGATCCAATATACTCCGCAAAATATGTCCGC TTCCAGATGGGTTACCCAAAGACACCTCTACCATCTCAATTACTTGTATCTCATGATAAT GAAGGCCAGTTGGCTGCTGATGACAACTATATCTGGACGTACACATCTCCACAATTTCCA ATGCTGCAGGAAAGTGTCCTTCAGTCTTTTAAGCTTCCACGCGCAGTTCTATGCATCGGT GGAGTTGTGAAGATTGAGTTTCTTGGTAGGGTTCAGAAACAGGAAATGGATGATCTATAT TACATATGTGGGGATTCCACTGCCGCGGGAACTAGGAGTAGATCCTTACAAGAACGGTGT GGTCCTCAAGTACTATCCAGATACTCGCAGATCTGGCGTGTGCCATGGTGA

Peptide Sequence

PEP ID	Os03t0861800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36381746:36384498:1 gene:Os03g0861800 transcript:Os03t0861800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 178 description:Cyclin-like F-box domain containing protein. (Os03t0861800-01);Hypothetical conserved gene. (Os03t0861800-02)
Sequence	MEEPGPEEEKEEEEARFDFLEWIGPDTSAAVFTFLDHPADLARASAVSRSWRRFVVRNGF SKIQCLRLCPEASNFTRIITKQAIASASESDAEHQHRAYMHLSYALLLDDPQDCIIRCIG ASTTDNFPEETIQNTLVPTDWVAMMRPSYWSSAGHFDPAVPECLFYRLRSDLCLVQQINI QPFRAFFQYGDPIYSAKYVRFQMGYPKTPLPSQLLVSHDNEGQLAADDNYIWTYTSPQFP MLQESVLQSFKLPRAVLCIGGVVKIEFLGRVQKQEMDDLYYICGDSTAAGTRSRSLQERC GPQVLSRYSQIWRVPW

Transcript Sequence

Transcript ID	Os03t0861800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36381746:36384498:1 gene:Os03g0861800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 178 description:Cyclin-like F-box domain containing protein. (Os03t0861800-01);Hypothetical conserved gene. (Os03t0861800-02)
Sequence	AGGAGTGGAACAAGAGGAAGAGGAAGGAAGGAAGCTAGGGTTAGCTAGCTGTGCATGGAG GAGCCTGGCCCTGAGGAAGAGAAGGAGGAGGAGGAGGCGCGCTTCGACTTCCTCGAGTGG ATCGGCCCGGACACCTCCGCCGCCGTTTTCACCTTCCTAGACCACCCCGCTGATCTCGCC CGCGCCTCCGCCGTCTCCCGTTCCTGGCGCCGATTCGTTGTTCGGAATGGCTTCAGCAAG ATCCAATGCCTGCGCCTTTGCCCTGAAGCTTCAAACTTCACCCGTATTATTACCAAACAA GCCATTGCCTCTGCTTCTGAGTCGGATGCGGAGCACCAGCACAGGGCGTACATGCATCTC AGCTATGCCCTTCTCTTGGATGACCCCCAGGACTGCATCATCCGCTGCATCGGTGCCTCC ACCACCGACAATTTCCCTGAGGAGACCATACAAAACACCCTTGTGCCCACCGATTGGGTG GCCATGATGAGGCCCTCTTATTGGTCCAGCGCCGGCCACTTCGATCCTGCTGTGCCCGAA TGCCTCTTTTACAGGCTTCGCTCCGATCTATGCCTCGTTCAACAAATCAACATACAGCCA TTCAGAGCTTTCTTCCAGTATGGTGATCCAATATACTCCGCAAAATATGTCCGCTTCCAG ATGGGTTACCCAAAGACACCTCTACCATCTCAATTACTTGTATCTCATGATAATGAAGGC CAGTTGGCTGCTGATGACAACTATATCTGGACGTACACATCTCCACAATTTCCAATGCTG CAGGAAAGTGTCCTTCAGTCTTTTAAGCTTCCACGCGCAGTTCTATGCATCGGTGGAGTT GTGAAGATTGAGTTTCTTGGTAGGGTTCAGAAACAGGAAATGGATGATCTATATTACATA TGTGGGGATTCCACTGCCGCGGGAACTAGGAGTAGATCCTTACAAGAACGGTGTGGTCCT CAAGTACTATCCAGATACTCGCAGATCTGGCGTGTGCCATGGTGAGTCATCAGGGGATGA TGGTCGCAACAGCCCCTCTAAGTGGCGCAACTTTACCACAAGAATCTTGCACTCAAGCTC AGCTCGACGATTAGGATGGAACCAGGCCATCTTGAACAGGCTGTTTGGCGCGCATGATGC ATCTGAGGAAGAGGAGGAAGAGACTTAAGAGGATATATATGGAAATTCATTTTGTCCCAT GTGATGTATGCTCACTGTGTTTTTAAGATCCTTTTCTCCTTTTTTTAACAAGATGAGAAT GCACTGGTGCCTTGTATGTAAGAGATGCTGTGAGTGCATCCTTGTTGAATGCTACTATAA TACATGCTGTATACATGAACAAGGATTAATGAGCGGAGCATAGAATGGAGAAGATGCTGC TACTCTACTGCAGTTCTGTTGCATATGGTTT