Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0861100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36347843:36358584:1 gene:Os03g0861100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0861100-01)
Sequence	ATGAGGCCGGAGACGCGGCTTGATTCAGCGGTGTTCCAGCTCACCCCCACCCGCACAAGG TGTGATTTAGTTGTGATAGCAAATGGACGGAAGGAGAAGATAGCCTCTGGTTTGCTGAAC CCGTTCGTTGCACATCTCAAGGTTGCCCAACAACAGATTGCAAAGGGAGGGTACTCCATC ACACTTGAGGTAGACCCAGAGATTGATGCACCATGGTTTACAAGGGGCACCGTGGAGAGG TTTGTCCGTTTCGTCAGTACACCAGAGGTCCTGGAACGAGTAACGACTATAGAGTCTGAG ATATTGCAGATCGAGGATGCCATCACTGGCCAGGGCGGTGACAATCTTGGATTGAGATCT GTAGAAGATTATAATGAAAAATTGGCGGAATGCATTGGAGGTAGCAAGACAAATTACGAT CTTGATGGGGATAAATCACTTATTCTGTACAAGCCGGGCATTCAACCACCTCCACCTGTG CAGAATGATAATGCAACTCAGGAGGAGAATTCAAAAGTTCAATTACTTAGAGTTCTGGAG ACTCGCAAAATTGTCTTACGTAAGGAGCAGGCTATGGCCTTTGCGCGTGCTGTAGCGGCT GGGTTTAATATTGACAACCTGGGATTTTTGATCACATTCGCAGACCGTTTTGGTGCTTCA CGCTTGATGAAGGCATGCACACAGTTCACTGAGTTGTGGAGAAGAAAGCATGAAACTGGC CAATGGATTGAAGTTGAACCGGAGGCAATGTCTGCACGGTCTGAATTTCCTCCCTTTAAT GCTTCTGGAATTATGTTTATGGGAGACAACATGAAGCAAAACCTGGAAACGCTTTCTATT TCGAATGGAGATGCAAATGGTGAAGATGCTGCTAAAGCTGATCAGAGGACAGCTCAGCAC TCAGGAGCTCCCAGCGAATACCTCCATGGTCCATATCAATCAGCATATCCACCATGGGCA ATTCATCCACCATATCCCATGCAAGGCATGCCTTACTACCCTGGGGTGAACCCATACTAC CCTCCACCCTACCCCCCAATGGATGATCCTAGGTACCACCACTCAGAGAGGAGAGTATCA AGGAAGCACTCGTCAGATAGCAAGGACTCAGAAACATTGGATGATGAAAGTGGCCAGAGT GGTTCAGAGATAGAGAGCTCTCATGGCCACAAGTTGCATAAAAAGGGCAAGCGATCAGGC AAGAAGAAACCCAGTGTAGTTGTCATAAGGAACATCAATGTGACGTCAAAAAAGCATGGC TCATCAGAGAGCGAGTCACAAACGAGTTCTGATGTAGCATCTGAGGACAGTGATGATTCA CACACTGAATACAGCAAGCGAAAGAATAAGAGATCTAGTTCAAAGAAAAAGGAGAGCAGA AAAATCATTCTTGAGCCTGGAGATGAGTATAGCAGGGATGAAGTAGCTCACAGGCAAGAT GGAGACCAAGGAAACTGGAATGTCTTCCAGAGTTTCTTGCTAAGAACTGAAGAGAAGACA AAAGATAATGACGCAGACCTATTTGCTACTGAGAGAGGACCACCGCCAGCAAGAAGGAAA GAAAGCAGAACCACTGATGATCCTCTTCTTTTAGTGGAGCGAGATTCTACCGATTTCAAT GAAGGGAAGACAATTGGTTTCAATTCAGCCCATGGGAGGATTAGGTCCAGGAAAATGCTG TCTGGTGACGAACTTGTGATCTCGGCTGAAGGTAGGAGTTTTGTGGATGGCGATATTAAG GAGATAGAAGCTGGAGGTGGAGGATACAGGAGAGGAGCAAGTGAAGACTTCATCGTTTAT GGTCAGGAAAAGCCAATGGACAGTGGGAGTTATTTGGATCCTCTTGCAGAGGGACAGTAC AAGAGTCCAACCCTGATGGAAAAGAACATGCATAGTGTGGCTGATGAGTCCTTTATGATA CCTGTTAGGTCTAACTCACAGGATAATCTTGGACCAGAAAGCTGTACCGCCATTGATATA GATGTTGAGCTTCCTGGAACTGTTAAGAAGACAACAGATGCAAAGGCTGGAGACCAACTT TTCTATGAGCCCGATGAGTTGATGCCAGAGCGTGAATATGAAGATGTCACATATGGATAT GATCCAGCAATGGACTATGATAGCCAGATGCAGATTCAACCTGCCATCATGGTTGAAGAT GCAAATGCGGATGATGTATCACTGGGGGTTGAGGGTGAAGTAAAGAAGCTAGAGAAAGAT AAGAAGCTTAGATTACAGGAATGTTTGGATAAAAAGAAGGATGCTTCGGCCAGGAGATTG CCATCGTCAAAAACCCGGCTAACAGATGCACAGAAACGTGCACAAAACCTGCGGGCATAT AAAGCAGACCTTCAAAAGGCAAAGAAAGAGCAGGAAGAGGAACAGATTAAACGGCTGGAA AGGCTTAAGCAAGAGAGGCAGAAGAGGATTGCTGCAAGAAGTAGCACATCTAATTCAATA TCAACACCACAGCAGGTCAAAGTGAAACCTTCACCAAAGACTTCTCCCAGTACCTACAAG AGTTCAAAGTTTAGTGATGCTGAACCAGGATCCTTTTCACCTCTAAGAAAGCTTCCTGCT AGAACTACTGCAGAGAGTGACCATCAGAAAACAGGAAAAGCTAGCAAACTAAGCGATAGT AGTACAAATGCAGTGAGTAAATCAACCTCATCATTGGCAGCGATGAAGAAAGAGAAAAAT GGGAGAAATGAATTGTCCAGTGAGAGATTGAAGAAACTTGCTGAACCTAAAAGTAATGCT TTGACCGACCGTCCTTCAAATTCAAAGTTTGCTAGCATGGACCATTCACGAAGGAAAAGC ATGCCAGAAGATACCCAAACAAAGAAAATATCTGCTATAATGCAGCTCGACCAGAGGAAA TCAGCAACTCTACCAGAACTCAAAGTCAAATCTCCACGAGCTCCCTCTATATCTGTGAAA AATAAGACAATTGCTAGAGAAATAAGGGATGGGGATCCTGGAGGTAAATCACCTCCCACT TTAGAAGTTACAGATGGAAAGAAAGCTGATGTAGAAGTCTCCAGGATAAGCAACAGTGAT GATAATGTGGTGGTTGAGAAGACTGTTGTGATTCTTGAAAATGAGGTGGTTTCAACACCT CCTCTCATTCTACCTCCTGGAAGAACATCAGAGAATGAAACTTCTAGCAATGACAGAACA CAGAAGCCCAGTATGGAATTGGAGTACACTGCCATCAGGGCTCCACCTTCTCCAGCTGTT CTTCCTGAAGCTGAGAACCCCACCATCCATAGACACAATGACCAGGGTAATTACGAGGTG ATGACGGAGCATCTGAAGGATGAGACTGAGGAATTGACCTTGTCTGCTGTGGAGAAACCC TACCAGGCCCCTTTTGCTAGGGTGACATCGTTGGAGAATGATTCAGCCACCATTCATGCT TACCCCCATGCACTACCAGTTGAATCTGAAACACCTGTGCATGCCGAGAGCATTAGGGCT CGAGTACTAGACCCAGTATCGACAGTTTCAGTGGAGGAGACCCCTGAAGCAAATGAAAAA CCTCGTAATAAGGAATCAAAAGGCTTCAGGAAACTTTTGAAGTTTGGTAGGAAGAGCCAC ACATCAGGTACAATGGATTCTGATGCATCATCTGTTGACGGAGCCTTAGCCGGAGACGGG TCAATGCTGAAAACCCTCATTTCGCGAGATGACTCTGGTTCTTCATCTAAAGCTTCTCGG TCGTTCTCCCTACTGTCACCGTTCCGCAGGCAGAAGGTGATTGTACTGTGA

Peptide Sequence

PEP ID	Os03t0861100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36347843:36358584:1 gene:Os03g0861100 transcript:Os03t0861100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0861100-01)
Sequence	MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAKGGYSI TLEVDPEIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGLRS VEDYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDNATQEENSKVQLLRVLE TRKIVLRKEQAMAFARAVAAGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRKHETG QWIEVEPEAMSARSEFPPFNASGIMFMGDNMKQNLETLSISNGDANGEDAAKADQRTAQH SGAPSEYLHGPYQSAYPPWAIHPPYPMQGMPYYPGVNPYYPPPYPPMDDPRYHHSERRVS RKHSSDSKDSETLDDESGQSGSEIESSHGHKLHKKGKRSGKKKPSVVVIRNINVTSKKHG SSESESQTSSDVASEDSDDSHTEYSKRKNKRSSSKKKESRKIILEPGDEYSRDEVAHRQD GDQGNWNVFQSFLLRTEEKTKDNDADLFATERGPPPARRKESRTTDDPLLLVERDSTDFN EGKTIGFNSAHGRIRSRKMLSGDELVISAEGRSFVDGDIKEIEAGGGGYRRGASEDFIVY GQEKPMDSGSYLDPLAEGQYKSPTLMEKNMHSVADESFMIPVRSNSQDNLGPESCTAIDI DVELPGTVKKTTDAKAGDQLFYEPDELMPEREYEDVTYGYDPAMDYDSQMQIQPAIMVED ANADDVSLGVEGEVKKLEKDKKLRLQECLDKKKDASARRLPSSKTRLTDAQKRAQNLRAY KADLQKAKKEQEEEQIKRLERLKQERQKRIAARSSTSNSISTPQQVKVKPSPKTSPSTYK SSKFSDAEPGSFSPLRKLPARTTAESDHQKTGKASKLSDSSTNAVSKSTSSLAAMKKEKN GRNELSSERLKKLAEPKSNALTDRPSNSKFASMDHSRRKSMPEDTQTKKISAIMQLDQRK SATLPELKVKSPRAPSISVKNKTIAREIRDGDPGGKSPPTLEVTDGKKADVEVSRISNSD DNVVVEKTVVILENEVVSTPPLILPPGRTSENETSSNDRTQKPSMELEYTAIRAPPSPAV LPEAENPTIHRHNDQGNYEVMTEHLKDETEELTLSAVEKPYQAPFARVTSLENDSATIHA YPHALPVESETPVHAESIRARVLDPVSTVSVEETPEANEKPRNKESKGFRKLLKFGRKSH TSGTMDSDASSVDGALAGDGSMLKTLISRDDSGSSSKASRSFSLLSPFRRQKVIVL

Transcript Sequence

Transcript ID	Os03t0861100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36347843:36358584:1 gene:Os03g0861100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0861100-01)
Sequence	AATTTACTAGCAGTATTTATTTTTCTTTCCTGCCCTTGATATTATTTATTATCTCTGTTT CTATTGTCGTTGTTCCCTTCTTCTACTGGTAACAAGGAATCCAATCAATCCCAGTACTGG GAGGGAGGGAGTCTGTCTCAACCTGCATTTGCTCTGTTCCAAAATTCTCTCCTTTCTTTG TTCTTTCCTCCGCTGGTCCATAGCATCTGATGATCCAATCATACTCCAAGATCTGAAGAG AAGGAGGGATTGGGAAGAATCGCTCTGCAATGAGGCCGGAGACGCGGCTTGATTCAGCGG TGTTCCAGCTCACCCCCACCCGCACAAGGTGTGATTTAGTTGTGATAGCAAATGGACGGA AGGAGAAGATAGCCTCTGGTTTGCTGAACCCGTTCGTTGCACATCTCAAGGTTGCCCAAC AACAGATTGCAAAGGGAGGGTACTCCATCACACTTGAGGTAGACCCAGAGATTGATGCAC CATGGTTTACAAGGGGCACCGTGGAGAGGTTTGTCCGTTTCGTCAGTACACCAGAGGTCC TGGAACGAGTAACGACTATAGAGTCTGAGATATTGCAGATCGAGGATGCCATCACTGGCC AGGGCGGTGACAATCTTGGATTGAGATCTGTAGAAGATTATAATGAAAAATTGGCGGAAT GCATTGGAGGTAGCAAGACAAATTACGATCTTGATGGGGATAAATCACTTATTCTGTACA AGCCGGGCATTCAACCACCTCCACCTGTGCAGAATGATAATGCAACTCAGGAGGAGAATT CAAAAGTTCAATTACTTAGAGTTCTGGAGACTCGCAAAATTGTCTTACGTAAGGAGCAGG CTATGGCCTTTGCGCGTGCTGTAGCGGCTGGGTTTAATATTGACAACCTGGGATTTTTGA TCACATTCGCAGACCGTTTTGGTGCTTCACGCTTGATGAAGGCATGCACACAGTTCACTG AGTTGTGGAGAAGAAAGCATGAAACTGGCCAATGGATTGAAGTTGAACCGGAGGCAATGT CTGCACGGTCTGAATTTCCTCCCTTTAATGCTTCTGGAATTATGTTTATGGGAGACAACA TGAAGCAAAACCTGGAAACGCTTTCTATTTCGAATGGAGATGCAAATGGTGAAGATGCTG CTAAAGCTGATCAGAGGACAGCTCAGCACTCAGGAGCTCCCAGCGAATACCTCCATGGTC CATATCAATCAGCATATCCACCATGGGCAATTCATCCACCATATCCCATGCAAGGCATGC CTTACTACCCTGGGGTGAACCCATACTACCCTCCACCCTACCCCCCAATGGATGATCCTA GGTACCACCACTCAGAGAGGAGAGTATCAAGGAAGCACTCGTCAGATAGCAAGGACTCAG AAACATTGGATGATGAAAGTGGCCAGAGTGGTTCAGAGATAGAGAGCTCTCATGGCCACA AGTTGCATAAAAAGGGCAAGCGATCAGGCAAGAAGAAACCCAGTGTAGTTGTCATAAGGA ACATCAATGTGACGTCAAAAAAGCATGGCTCATCAGAGAGCGAGTCACAAACGAGTTCTG ATGTAGCATCTGAGGACAGTGATGATTCACACACTGAATACAGCAAGCGAAAGAATAAGA GATCTAGTTCAAAGAAAAAGGAGAGCAGAAAAATCATTCTTGAGCCTGGAGATGAGTATA GCAGGGATGAAGTAGCTCACAGGCAAGATGGAGACCAAGGAAACTGGAATGTCTTCCAGA GTTTCTTGCTAAGAACTGAAGAGAAGACAAAAGATAATGACGCAGACCTATTTGCTACTG AGAGAGGACCACCGCCAGCAAGAAGGAAAGAAAGCAGAACCACTGATGATCCTCTTCTTT TAGTGGAGCGAGATTCTACCGATTTCAATGAAGGGAAGACAATTGGTTTCAATTCAGCCC ATGGGAGGATTAGGTCCAGGAAAATGCTGTCTGGTGACGAACTTGTGATCTCGGCTGAAG GTAGGAGTTTTGTGGATGGCGATATTAAGGAGATAGAAGCTGGAGGTGGAGGATACAGGA GAGGAGCAAGTGAAGACTTCATCGTTTATGGTCAGGAAAAGCCAATGGACAGTGGGAGTT ATTTGGATCCTCTTGCAGAGGGACAGTACAAGAGTCCAACCCTGATGGAAAAGAACATGC ATAGTGTGGCTGATGAGTCCTTTATGATACCTGTTAGGTCTAACTCACAGGATAATCTTG GACCAGAAAGCTGTACCGCCATTGATATAGATGTTGAGCTTCCTGGAACTGTTAAGAAGA CAACAGATGCAAAGGCTGGAGACCAACTTTTCTATGAGCCCGATGAGTTGATGCCAGAGC GTGAATATGAAGATGTCACATATGGATATGATCCAGCAATGGACTATGATAGCCAGATGC AGATTCAACCTGCCATCATGGTTGAAGATGCAAATGCGGATGATGTATCACTGGGGGTTG AGGGTGAAGTAAAGAAGCTAGAGAAAGATAAGAAGCTTAGATTACAGGAATGTTTGGATA AAAAGAAGGATGCTTCGGCCAGGAGATTGCCATCGTCAAAAACCCGGCTAACAGATGCAC AGAAACGTGCACAAAACCTGCGGGCATATAAAGCAGACCTTCAAAAGGCAAAGAAAGAGC AGGAAGAGGAACAGATTAAACGGCTGGAAAGGCTTAAGCAAGAGAGGCAGAAGAGGATTG CTGCAAGAAGTAGCACATCTAATTCAATATCAACACCACAGCAGGTCAAAGTGAAACCTT CACCAAAGACTTCTCCCAGTACCTACAAGAGTTCAAAGTTTAGTGATGCTGAACCAGGAT CCTTTTCACCTCTAAGAAAGCTTCCTGCTAGAACTACTGCAGAGAGTGACCATCAGAAAA CAGGAAAAGCTAGCAAACTAAGCGATAGTAGTACAAATGCAGTGAGTAAATCAACCTCAT CATTGGCAGCGATGAAGAAAGAGAAAAATGGGAGAAATGAATTGTCCAGTGAGAGATTGA AGAAACTTGCTGAACCTAAAAGTAATGCTTTGACCGACCGTCCTTCAAATTCAAAGTTTG CTAGCATGGACCATTCACGAAGGAAAAGCATGCCAGAAGATACCCAAACAAAGAAAATAT CTGCTATAATGCAGCTCGACCAGAGGAAATCAGCAACTCTACCAGAACTCAAAGTCAAAT CTCCACGAGCTCCCTCTATATCTGTGAAAAATAAGACAATTGCTAGAGAAATAAGGGATG GGGATCCTGGAGGTAAATCACCTCCCACTTTAGAAGTTACAGATGGAAAGAAAGCTGATG TAGAAGTCTCCAGGATAAGCAACAGTGATGATAATGTGGTGGTTGAGAAGACTGTTGTGA TTCTTGAAAATGAGGTGGTTTCAACACCTCCTCTCATTCTACCTCCTGGAAGAACATCAG AGAATGAAACTTCTAGCAATGACAGAACACAGAAGCCCAGTATGGAATTGGAGTACACTG CCATCAGGGCTCCACCTTCTCCAGCTGTTCTTCCTGAAGCTGAGAACCCCACCATCCATA GACACAATGACCAGGGTAATTACGAGGTGATGACGGAGCATCTGAAGGATGAGACTGAGG AATTGACCTTGTCTGCTGTGGAGAAACCCTACCAGGCCCCTTTTGCTAGGGTGACATCGT TGGAGAATGATTCAGCCACCATTCATGCTTACCCCCATGCACTACCAGTTGAATCTGAAA CACCTGTGCATGCCGAGAGCATTAGGGCTCGAGTACTAGACCCAGTATCGACAGTTTCAG TGGAGGAGACCCCTGAAGCAAATGAAAAACCTCGTAATAAGGAATCAAAAGGCTTCAGGA AACTTTTGAAGTTTGGTAGGAAGAGCCACACATCAGGTACAATGGATTCTGATGCATCAT CTGTTGACGGAGCCTTAGCCGGAGACGGGTCAATGCTGAAAACCCTCATTTCGCGAGATG ACTCTGGTTCTTCATCTAAAGCTTCTCGGTCGTTCTCCCTACTGTCACCGTTCCGCAGGC AGAAGGTGATTGTACTGTGACCGTGAGTTGGCTGATCCTGATCTGTCATGTTAATGCAGC TTGTGCATTAACTAATTTGTTTCTTAGTAGTACATACACATACAGACATGTTAGTAGTAC ATACATACTATTGCCTACATCTGTGTACGTTGCTTGTAAGCTGTGTATTTTGAGTGCGCG TTTATGTGACTTTCTGTATATGTAGTACTTGGTATGCATATGTATATTATGTTACACACA AGCACAAAACACATTCGTTTGATCGATCGATTCCATTTGC