Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0860600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:36318400:36319650:1 gene:Os03g0860600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate-dependent oxygenase. (Os03t0860600-01)
Sequence

ATGGGCAGCAGCTCCGGCTCCGACCGGCTACGCGACCTCCAGGCCTTCGACGACACAAAG
GCCGGCGTGAAGGGCCTCGTCGATGCCGGCGTCACAACCATCCCCGCCATCTTCCACCAC
CACCCGCTGCTACTGGACGATGCGGAGGAGGATGCGGATGTTATCCCGGTGATCGATCTG
CAGGCGGACGTTGACCGAGGCCATCTGGTTGGTCAGGTGAGGGCGGCCGCCCAGTGTGTG
GGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGGCGAGCTCCTGGAGGAGATGCTGGCG
GCGGTGCGGCGGTTCAACGAGCAGCCGGCGGAGGGCAAGAAAGCCTGGTACAGCAGGGAC
AGCGGGCGGAGGGTGAAGTTCAACTCCAATTTCGACCTGTTCCAGTCGCCGGCCGCCAAC
TGGCGTGACACGCTGTTGCTGGAGCTGACGCCACGGCCGGGGCCGGCAGCGGAGGAGATC
CCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGG
GCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTC
GGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTG
ACGCTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGACAGTGCTGCTGCAGGAGAGC
AAGGGCCTGCAGGTGCTCATGAGGCAGCGCCAGCGGTGGGTGGACGTCCCTCCGGTGGCC
GGCGCTCTGGTGGTCAACATCGGCGACCTCCTCCAGCTAGTGTCCAACGACCTCTTCCGA
AGCGTGGAGCACCGGGTGTTGGCAACCACCGCCGCCGCGGAGCCTCGCCTCTCCGTCGCC
TGCTTCTTCCGTCCCGACTACGCCTGCACCAGGGTGTACGCCCCCGTCACCACCACGCCG
CCGCCACCGCTCTACAGGAGCACCACCATGCCGGAGTTCCTCTCGCATTACAGAGCCAAA
GGCCTCGACGGCCGATCCGCGCTCCACCACTTCAGGATCCCTCCTCCTTCATCTCCACCA
CATTAA

Peptide Sequence

PEP ID

Os03t0860600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:36318400:36319650:1 gene:Os03g0860600 transcript:Os03t0860600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate-dependent oxygenase. (Os03t0860600-01)
Sequence

MGSSSGSDRLRDLQAFDDTKAGVKGLVDAGVTTIPAIFHHHPLLLDDAEEDADVIPVIDL
QADVDRGHLVGQVRAAAQCVGFFQVVNHGIPGELLEEMLAAVRRFNEQPAEGKKAWYSRD
SGRRVKFNSNFDLFQSPAANWRDTLLLELTPRPGPAAEEIPPACRGVVGEYVEAVQRLGG
ALLELLSEALGLPPEYLGGLGGGLATMAAHYYPPCPEPHLTLGTTRHSDPSFLTVLLQES
KGLQVLMRQRQRWVDVPPVAGALVVNIGDLLQLVSNDLFRSVEHRVLATTAAAEPRLSVA
CFFRPDYACTRVYAPVTTTPPPPLYRSTTMPEFLSHYRAKGLDGRSALHHFRIPPPSSPP
H

Transcript Sequence

Transcript ID

Os03t0860600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36318400:36319650:1 gene:Os03g0860600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate-dependent oxygenase. (Os03t0860600-01)
Sequence

AGATCAGGTCATCGATCGATGGGCAGCAGCTCCGGCTCCGACCGGCTACGCGACCTCCAG
GCCTTCGACGACACAAAGGCCGGCGTGAAGGGCCTCGTCGATGCCGGCGTCACAACCATC
CCCGCCATCTTCCACCACCACCCGCTGCTACTGGACGATGCGGAGGAGGATGCGGATGTT
ATCCCGGTGATCGATCTGCAGGCGGACGTTGACCGAGGCCATCTGGTTGGTCAGGTGAGG
GCGGCCGCCCAGTGTGTGGGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGGCGAGCTC
CTGGAGGAGATGCTGGCGGCGGTGCGGCGGTTCAACGAGCAGCCGGCGGAGGGCAAGAAA
GCCTGGTACAGCAGGGACAGCGGGCGGAGGGTGAAGTTCAACTCCAATTTCGACCTGTTC
CAGTCGCCGGCCGCCAACTGGCGTGACACGCTGTTGCTGGAGCTGACGCCACGGCCGGGG
CCGGCAGCGGAGGAGATCCCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCG
GTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCG
GAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCA
TGCCCGGAGCCGCACCTGACGCTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGACA
GTGCTGCTGCAGGAGAGCAAGGGCCTGCAGGTGCTCATGAGGCAGCGCCAGCGGTGGGTG
GACGTCCCTCCGGTGGCCGGCGCTCTGGTGGTCAACATCGGCGACCTCCTCCAGCTAGTG
TCCAACGACCTCTTCCGAAGCGTGGAGCACCGGGTGTTGGCAACCACCGCCGCCGCGGAG
CCTCGCCTCTCCGTCGCCTGCTTCTTCCGTCCCGACTACGCCTGCACCAGGGTGTACGCC
CCCGTCACCACCACGCCGCCGCCACCGCTCTACAGGAGCACCACCATGCCGGAGTTCCTC
TCGCATTACAGAGCCAAAGGCCTCGACGGCCGATCCGCGCTCCACCACTTCAGGATCCCT
CCTCCTTCATCTCCACCACATTAATTTTTTTTCTTAATTTCTTACAGATATGCTCCGTAC
CTTCGGACTCGTACTACTTTAATTAATTACAGTATATATGTATGTACGTATATATATATT
CACATGATGCATTCATCATATATCATCCATCGGGACTATTTGTCTGTGTGT