Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0859900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:36292039:36294776:1 gene:Os03g0859900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os03t0859900-01)
Sequence

TTTCAATTACAGAGCAGAAGAACAGTGCCCGCGCGGCGGCTGCGGCAGAGACTTGAGCAA
GAGGTGAGTGAGCTGAAGAAGCAGCTGCGGAACGAGGAGGCGGTGCATGATATCCTAAAC
CGCGCCCTTCAGCACTCAAACACCACCAAATCATCATCATCATTGTCGTCTCCATCCGTC
CTCCACAACATCCCTGCATTCATCCCGCACAAGGCCAAGGAGCTTCTAGCAGAGCTGGTG
CTGGTGGAGGAGGAGATTGCCCGCCTGGAGACCCAGATCCGAAGCATGAAGAAGGCGGCG
GCCACCACAACTACCCAGAATGCAATCAACCTCACCCACGACGACACTGTCAATGCCAAT
GTTAATAGTGGAGGATCTGCAGCAGGAGATCATGCCAACATCAAGTCCATGTTCTTCATC
AGTCAGGCCATCAACGGCCTCGACACAAGCCGCCATCATCATCCTCTCATGACCATCGTC
AGCAATAAACCTCCCACTCCCAGTCCAAAGCTTAATTCACTCGATGATACTAGTAGTAGT
AGTAACAAAAAGAAGAAGATGGTGCAGCAGCCCAACAAGCTGTCGGAGAGGATCGTCAAG
TGCCTCATCTGCATCTTCATCCGACTGCTCAGGTCCTCGAGGGTCGCCGACCTGCAGCTG
CAGCAGCAGGACAACAACAACAACAACGCTAGTAGTAGGTCCTCTTCCTCATCGCCTTCA
CTGACCAGGCAGCATCAGGGAGGAGGAGGAGGTGGAAGCTTCAGAATCGACACCAGCCTG
GTAATGAACAAACAGCAGCAGCAGCAGGATTGCCGGTCGGGGCAGCAGGATCACTACGGC
ATCTTCGCCATCCCGGATTCCATCGTCAGAGATATAGGCCCCTACAAGAACCTCGTCAGC
TTCACTTCCTCCGCTTTCGACCTCAGAGGATTCTCCACCTCTCCCCTGCTCACCAAGCTC
AGGGGGATGCTGGAGGCACTGCAGCATGTGGATTTGAGGTTTCTCACTCACCACCAAAAG
CTTGCCTTCTGGCTCAACATATACAACACCTGCATCATGCACGGGATTTTGCACAATGGA
CTACCCTCAAACCCTGAAAAGCTACTTGCACTGAAGAACAAGGCCACGCTGAATGTATCA
GGGCAAAAGTTGAACGCCTTGGTGATAGAGAATTTCATCCTCAGACAGCCATCCAGTGTC
AAAGAAGAATTCTGGAAATGCGAGGTGGATGTGGAAGAACAGCAGGTGAGGAGTCGTTAC
GGGCTCAACAGCTCAGAACCCAACATTCTGTTCGCACTCTGCTGTGGCAACAGATCATCT
CCCGCGCTACGAATATACAAGGCTGATCGTGTGATGATGGATCTGGAGAAGGCGAAGCTG
GAGTATCTGCAGGCATCGCTGGTGGTGACATCGACGAGGAGGAGGCTGATGATCCCAAGC
CTCATACACTCCAACATGCACGACTTCGCAAAGGACCTGGACTCGCTTGTTCGCTGGATT
TGCGACCAGCTGCCCACGTCCTGGTCTCTCAGGAAATCCATGGTTGATTGCCTCAGGTGG
TCCGGACACCGTCTCAACATCCATCACCTCGTCGACGTCATTCCATACGACTACGACTTT
CAGTACCTACTCCCAATGTGA

Peptide Sequence

PEP ID

Os03t0859900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:36292039:36294776:1 gene:Os03g0859900 transcript:Os03t0859900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os03t0859900-01)
Sequence

FQLQSRRTVPARRLRQRLEQEVSELKKQLRNEEAVHDILNRALQHSNTTKSSSSLSSPSV
LHNIPAFIPHKAKELLAELVLVEEEIARLETQIRSMKKAAATTTTQNAINLTHDDTVNAN
VNSGGSAAGDHANIKSMFFISQAINGLDTSRHHHPLMTIVSNKPPTPSPKLNSLDDTSSS
SNKKKKMVQQPNKLSERIVKCLICIFIRLLRSSRVADLQLQQQDNNNNNASSRSSSSSPS
LTRQHQGGGGGGSFRIDTSLVMNKQQQQQDCRSGQQDHYGIFAIPDSIVRDIGPYKNLVS
FTSSAFDLRGFSTSPLLTKLRGMLEALQHVDLRFLTHHQKLAFWLNIYNTCIMHGILHNG
LPSNPEKLLALKNKATLNVSGQKLNALVIENFILRQPSSVKEEFWKCEVDVEEQQVRSRY
GLNSSEPNILFALCCGNRSSPALRIYKADRVMMDLEKAKLEYLQASLVVTSTRRRLMIPS
LIHSNMHDFAKDLDSLVRWICDQLPTSWSLRKSMVDCLRWSGHRLNIHHLVDVIPYDYDF
QYLLPM

Transcript Sequence

Transcript ID

Os03t0859900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36292039:36294776:1 gene:Os03g0859900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os03t0859900-01)
Sequence

GTACGACAGCGCCCTCCCAACCATCTGCTCTCTCTAAGCTCTAGCTCTACCTTTCTTCCT
CCTCGATCCATCCATCATCGATCATTCTTCTTCTTCTTCACCTAGCTAGCTTGCTCCCGC
CAGACGGTTCTAATATAATGAACCATCGCTAGCTAGTTCATCCCATCGTACAGTGCACTA
GTATAGTATATGGAGGAGTACGTGACCGCGGGAAGCACTACTCCTCCGCCCCATCTTCAC
CAGCTGCTCTCCGGCACCGGCGCTGCACCACCACCGTCGTCTCACGATGACGCCCATCCT
CACCCTCATCCTCAGCTGTTTAATTTCAATTACAGAGCAGAAGAACAGTGCCCGCGCGGC
GGCTGCGGCAGAGACTTGAGCAAGAGGTGAGTGAGCTGAAGAAGCAGCTGCGGAACGAGG
AGGCGGTGCATGATATCCTAAACCGCGCCCTTCAGCACTCAAACACCACCAAATCATCAT
CATCATTGTCGTCTCCATCCGTCCTCCACAACATCCCTGCATTCATCCCGCACAAGGCCA
AGGAGCTTCTAGCAGAGCTGGTGCTGGTGGAGGAGGAGATTGCCCGCCTGGAGACCCAGA
TCCGAAGCATGAAGAAGGCGGCGGCCACCACAACTACCCAGAATGCAATCAACCTCACCC
ACGACGACACTGTCAATGCCAATGTTAATAGTGGAGGATCTGCAGCAGGAGATCATGCCA
ACATCAAGTCCATGTTCTTCATCAGTCAGGCCATCAACGGCCTCGACACAAGCCGCCATC
ATCATCCTCTCATGACCATCGTCAGCAATAAACCTCCCACTCCCAGTCCAAAGCTTAATT
CACTCGATGATACTAGTAGTAGTAGTAACAAAAAGAAGAAGATGGTGCAGCAGCCCAACA
AGCTGTCGGAGAGGATCGTCAAGTGCCTCATCTGCATCTTCATCCGACTGCTCAGGTCCT
CGAGGGTCGCCGACCTGCAGCTGCAGCAGCAGGACAACAACAACAACAACGCTAGTAGTA
GGTCCTCTTCCTCATCGCCTTCACTGACCAGGCAGCATCAGGGAGGAGGAGGAGGTGGAA
GCTTCAGAATCGACACCAGCCTGGTAATGAACAAACAGCAGCAGCAGCAGGATTGCCGGT
CGGGGCAGCAGGATCACTACGGCATCTTCGCCATCCCGGATTCCATCGTCAGAGATATAG
GCCCCTACAAGAACCTCGTCAGCTTCACTTCCTCCGCTTTCGACCTCAGAGGATTCTCCA
CCTCTCCCCTGCTCACCAAGCTCAGGGGGATGCTGGAGGCACTGCAGCATGTGGATTTGA
GGTTTCTCACTCACCACCAAAAGCTTGCCTTCTGGCTCAACATATACAACACCTGCATCA
TGCACGGGATTTTGCACAATGGACTACCCTCAAACCCTGAAAAGCTACTTGCACTGAAGA
ACAAGGCCACGCTGAATGTATCAGGGCAAAAGTTGAACGCCTTGGTGATAGAGAATTTCA
TCCTCAGACAGCCATCCAGTGTCAAAGAAGAATTCTGGAAATGCGAGGTGGATGTGGAAG
AACAGCAGGTGAGGAGTCGTTACGGGCTCAACAGCTCAGAACCCAACATTCTGTTCGCAC
TCTGCTGTGGCAACAGATCATCTCCCGCGCTACGAATATACAAGGCTGATCGTGTGATGA
TGGATCTGGAGAAGGCGAAGCTGGAGTATCTGCAGGCATCGCTGGTGGTGACATCGACGA
GGAGGAGGCTGATGATCCCAAGCCTCATACACTCCAACATGCACGACTTCGCAAAGGACC
TGGACTCGCTTGTTCGCTGGATTTGCGACCAGCTGCCCACGTCCTGGTCTCTCAGGAAAT
CCATGGTTGATTGCCTCAGGTGGTCCGGACACCGTCTCAACATCCATCACCTCGTCGACG
TCATTCCATACGACTACGACTTTCAGTACCTACTCCCAATGTGAACTGATTCCATCTCTG
CTTTCTTTCCTTTTTTGCCGGTATATATGTATGAGTATTAATTAATTTGTTTTGCGGAGA
CCATCTTAATTAATCTATGGCTATCCAATGATGTTATCTA