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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0859800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:36286435:36288422:-1 gene:Os03g0859800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ovarian tumour, otubain domain containing protein. (Os03t0859800-01);Similar to cysteine-type peptidase. (Os03t0859800-02)
Sequence

TCAGATCACCAAAGACTCCTTCACAGGTTGGAGCTGTATGATCTTGCTGAGCTCAAGGTT
GAAGGGGATGGCAATTGTCAGTTCCGAGCATTGTCCGATCAATTTTACCGCACCACTGAA
CACCACAGATTTGTTCGGCAACAAATAGTGAAACAGCTTGAGTCTTATCCGGAAATTTAT
GCAGGATATGTCCCTATGGATTATAGGGAATATCTAAAAAAGATGATAAAGAACGGGGAG
TGGGGTGACCACGTTACATTGCAGGCTGCTGCAGACTCGTATGGTGTAAAGATTTTCATC
CTGACATCATTCAGAGATACTTGCTACATTGAAATCCTTCCTGTTGTTCAGAAATCAGAA
AGAGTTATATGCTTGAGTTTTTGGGCTGAGGTGCACTACAACTCGATATATCCAGAAGGA
GAGTTACCAGTTATGGAGAACAAAAGGAAAAGGTGGTGGCATTTTTAG

Peptide Sequence

PEP ID

Os03t0859800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:36286435:36288422:-1 gene:Os03g0859800 transcript:Os03t0859800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ovarian tumour, otubain domain containing protein. (Os03t0859800-01);Similar to cysteine-type peptidase. (Os03t0859800-02)
Sequence

SDHQRLLHRLELYDLAELKVEGDGNCQFRALSDQFYRTTEHHRFVRQQIVKQLESYPEIY
AGYVPMDYREYLKKMIKNGEWGDHVTLQAAADSYGVKIFILTSFRDTCYIEILPVVQKSE
RVICLSFWAEVHYNSIYPEGELPVMENKRKRWWHF

Transcript Sequence

Transcript ID

Os03t0859800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36286435:36288422:-1 gene:Os03g0859800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ovarian tumour, otubain domain containing protein. (Os03t0859800-01);Similar to cysteine-type peptidase. (Os03t0859800-02)
Sequence

TCAGATCACCAAAGACTCCTTCACAGGTTGGAGCTGTATGATCTTGCTGAGCTCAAGGTT
GAAGGGGATGGCAATTGTCAGTTCCGAGCATTGTCCGATCAATTTTACCGCACCACTGAA
CACCACAGATTTGTTCGGCAACAAATAGTGAAACAGCTTGAGTCTTATCCGGAAATTTAT
GCAGGATATGTCCCTATGGATTATAGGGAATATCTAAAAAAGATGATAAAGAACGGGGAG
TGGGGTGACCACGTTACATTGCAGGCTGCTGCAGACTCGTATGGTGTAAAGATTTTCATC
CTGACATCATTCAGAGATACTTGCTACATTGAAATCCTTCCTGTTGTTCAGAAATCAGAA
AGAGTTATATGCTTGAGTTTTTGGGCTGAGGTGCACTACAACTCGATATATCCAGAAGGA
GAGTTACCAGTTATGGAGAACAAAAGGAAAAGGTGGTGGCATTTTTAGATCAGCAACTGG
TGTACACTCCATTGGGCTGGGTACACTCCATTTGATTTGATTTGATGTTGGTTAGATCAG
TGGCCATTTTGTTGGGGCTATATGTCAGTGTAGGAATGTTGATTTGTGAGTGTACATAAC
ACATTTAGTCAGGAGGAAGAATAGCTGTGACAATAGATGAATGTATCATGTATTGGATAT
TATTGATGTTATATAGGGTCACTTAGAGTTGGGTTT