Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0859100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36256124:36259391:-1 gene:Os03g0859100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 55 description:Esterase, SGNH hydrolase-type domain containing protein. (Os03t0859100-01);Similar to anther-specific proline-rich protein APG. (Os03t0859100-02);Similar to anther-specific proline-rich protein APG. (Os03t0859100-03)
Sequence	ATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTG GCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATG GTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTA AAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCC ACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGTG AAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGG GTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGTG ATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTT GTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGC ACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATC CCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCG CTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAG AGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAG CTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGG ATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTAC GGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTC TGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGC TACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTC CAGTTCCTCCTCGCCTAG

Peptide Sequence

PEP ID	Os03t0859100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36256124:36259391:-1 gene:Os03g0859100 transcript:Os03t0859100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 55 description:Esterase, SGNH hydrolase-type domain containing protein. (Os03t0859100-01);Similar to anther-specific proline-rich protein APG. (Os03t0859100-02);Similar to anther-specific proline-rich protein APG. (Os03t0859100-03)
Sequence	MTMKMKQQMMNKLGLLVVAVAVAMAPAGSFASSSGRGAPMVPAVIVFGDSIVDPGNNNNL KTQIKANHAPYGMDFANSEPTGRYSNGLIPTDFIVQGLNVKQLMPPYLGVELSPEDLKTG VSFASGATGYDPLTPVIVSVITLDQQIEYFHEYRKRLVGVVGEEETARIIDGALFVVCAG TDDIANTYFTTPFRSVEYDIPSYVDLLVSGAAKLLDQVAALGARRIGFVGLPPIGCVPSQ RTLGGGPHRRCEEKRNYAAKLFNSRMEEVIAAKTNPATTRMVYVDIYTILQELVENGDKY GFTETTRGCCGTGTIEVTGLCDARFVDICDNVSNHVFFDSYHPTQRAYKIIVDYIFDNYL QFLLA

Transcript Sequence

Transcript ID	Os03t0859100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36256124:36259391:-1 gene:Os03g0859100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 55 description:Esterase, SGNH hydrolase-type domain containing protein. (Os03t0859100-01);Similar to anther-specific proline-rich protein APG. (Os03t0859100-02);Similar to anther-specific proline-rich protein APG. (Os03t0859100-03)
Sequence	ACAGCCACAGGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTG CAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTAT AAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAA TTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGT GGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGG GGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAA CAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAA CAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGG GCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCT CAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGAT CGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCT GGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGT GTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGA GTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCA GGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGT CCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTA CGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGC CACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGG GGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGT CACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTT CTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGA CAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCT TCCTTCTTAATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATT ATATATATTGATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTT TTTCCCGCACAAATTAATTAAGCTGCTGATTATATTTCTC